Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 HMGXB4-206ENST00000466438 575 ntTSL 317.54■□□□□ 0.48e-7■□□□□ 8.8
NKRFO15226 ZNF276-205ENST00000563541 588 ntTSL 316.32■□□□□ 0.28e-7■□□□□ 8.8
NKRFO15226 HMGXB4-204ENST00000455359 1325 ntTSL 1 (best)16.29■□□□□ 0.28e-7■□□□□ 8.8
NKRFO15226 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.198e-7■□□□□ 8.8
NKRFO15226 SMAD3-213ENST00000560175 542 ntTSL 415.3■□□□□ 0.045e-6■□□□□ 8.8
NKRFO15226 AIFM3-217ENST00000495869 501 ntTSL 414.51□□□□□ -0.098e-7■□□□□ 8.8
NKRFO15226 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.138e-7■□□□□ 8.8
NKRFO15226 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.158e-7■□□□□ 8.8
NKRFO15226 SMAD3-204ENST00000540846 1567 ntTSL 1 (best) BASIC13.83□□□□□ -0.195e-6■□□□□ 8.8
NKRFO15226 GPR137-210ENST00000538244 350 ntTSL 313.81□□□□□ -0.28e-7■□□□□ 8.8
NKRFO15226 BAHD1-201ENST00000416165 4526 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.398e-7■□□□□ 8.8
NKRFO15226 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.468e-7■□□□□ 8.8
NKRFO15226 YPEL5-203ENST00000379520 2560 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.548e-7■□□□□ 8.8
NKRFO15226 PLXNA3-201ENST00000369682 10885 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.576e-6■□□□□ 8.8
NKRFO15226 BCAP31-205ENST00000430088 570 ntTSL 29.38□□□□□ -0.918e-7■□□□□ 8.8
NKRFO15226 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.988e-7■□□□□ 8.8
NKRFO15226 SMAD3-212ENST00000559937 579 ntTSL 48.9□□□□□ -0.985e-6■□□□□ 8.8
NKRFO15226 HMGXB4-202ENST00000418170 4216 ntTSL 1 (best)8.8□□□□□ -18e-7■□□□□ 8.8
NKRFO15226 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.268e-7■□□□□ 8.8
NKRFO15226 YPEL5-208ENST00000490211 653 ntTSL 56.9□□□□□ -1.38e-7■□□□□ 8.8
NKRFO15226 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.348e-7■□□□□ 8.8
NKRFO15226 SMAD3-209ENST00000558894 797 ntTSL 56.47□□□□□ -1.375e-6■□□□□ 8.8
NKRFO15226 PTPN9-204ENST00000564970 726 ntTSL 56.07□□□□□ -1.448e-7■□□□□ 8.8
NKRFO15226 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.468e-7■□□□□ 8.8
NKRFO15226 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.062e-12■□□□□ 8.8
NKRFO15226 DHCR24-203ENST00000535035 4153 ntTSL 1 (best) BASIC11.71□□□□□ -0.532e-12■□□□□ 8.8
NKRFO15226 SHROOM1-204ENST00000440118 1080 ntTSL 223.04■■□□□ 1.286e-8■□□□□ 8.7
NKRFO15226 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.016e-8■□□□□ 8.7
NKRFO15226 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.851e-8■□□□□ 8.7
NKRFO15226 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.378e-13■□□□□ 8.7
NKRFO15226 PLXND1-209ENST00000505505 559 ntTSL 219.49■□□□□ 0.715e-6■□□□□ 8.7
NKRFO15226 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.275e-6■□□□□ 8.7
NKRFO15226 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.75e-8■□□□□ 8.7
NKRFO15226 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.86■■■□□ 2.695e-8■□□□□ 8.7
NKRFO15226 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.525e-8■□□□□ 8.7
NKRFO15226 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.09■□□□□ 0.815e-8■□□□□ 8.7
NKRFO15226 NADK2-208ENST00000511088 579 ntTSL 49.73□□□□□ -0.855e-8■□□□□ 8.7
NKRFO15226 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC9.35□□□□□ -0.915e-8■□□□□ 8.7
NKRFO15226 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.12□□□□□ -1.595e-8■□□□□ 8.7
NKRFO15226 NME4-204ENST00000433358 966 ntTSL 327.1■■□□□ 1.933e-10■□□□□ 8.7
NKRFO15226 NME4-209ENST00000460297 1652 ntTSL 527.05■■□□□ 1.923e-10■□□□□ 8.7
NKRFO15226 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.623e-10■□□□□ 8.7
NKRFO15226 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.2■■□□□ 1.623e-10■□□□□ 8.7
NKRFO15226 MBD3-205ENST00000589064 1475 ntTSL 224■■□□□ 1.433e-10■□□□□ 8.7
NKRFO15226 MBD3-209ENST00000592012 2379 ntTSL 521.97■■□□□ 1.113e-10■□□□□ 8.7
NKRFO15226 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.47■■□□□ 1.033e-10■□□□□ 8.7
NKRFO15226 MBD3-210ENST00000592361 907 ntTSL 519.94■□□□□ 0.783e-10■□□□□ 8.7
NKRFO15226 RER1-208ENST00000493207 686 ntTSL 219.22■□□□□ 0.673e-10■□□□□ 8.7
NKRFO15226 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.073e-10■□□□□ 8.7
NKRFO15226 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.961e-6■□□□□ 8.7
NKRFO15226 HSBP1L1-203ENST00000589516 800 ntTSL 324.43■■□□□ 1.51e-6■□□□□ 8.7
NKRFO15226 HSBP1L1-205ENST00000592352 564 ntTSL 222.67■■□□□ 1.221e-6■□□□□ 8.7
NKRFO15226 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.253e-6■□□□□ 8.7
NKRFO15226 RAB11FIP3-203ENST00000434585 3550 ntAPPRIS ALT2 TSL 513.59□□□□□ -0.233e-6■□□□□ 8.7
NKRFO15226 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC13.32□□□□□ -0.283e-6■□□□□ 8.7
NKRFO15226 ZNF7-210ENST00000530082 581 ntTSL 323.86■■□□□ 1.412e-7■□□□□ 8.7
NKRFO15226 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.83■■□□□ 1.415e-14■□□□□ 8.7
NKRFO15226 ZNF7-214ENST00000532382 855 ntTSL 320.72■□□□□ 0.912e-7■□□□□ 8.7
NKRFO15226 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.27■□□□□ 0.842e-7■□□□□ 8.7
NKRFO15226 ZNF7-212ENST00000530776 546 ntTSL 420.27■□□□□ 0.842e-7■□□□□ 8.7
NKRFO15226 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.25■□□□□ 0.835e-14■□□□□ 8.7
NKRFO15226 ZNF7-216ENST00000532777 915 ntTSL 1 (best)20.03■□□□□ 0.82e-7■□□□□ 8.7
NKRFO15226 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.742e-7■□□□□ 8.7
NKRFO15226 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.02■□□□□ 0.645e-14■□□□□ 8.7
NKRFO15226 PFKL-211ENST00000498841 3122 ntTSL 1 (best)18.65■□□□□ 0.582e-7■□□□□ 8.7
NKRFO15226 PFKL-207ENST00000474114 6007 ntTSL 1 (best)18.3■□□□□ 0.522e-7■□□□□ 8.7
NKRFO15226 ZNF7-208ENST00000529767 546 ntTSL 417.77■□□□□ 0.442e-7■□□□□ 8.7
NKRFO15226 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.422e-7■□□□□ 8.7
NKRFO15226 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.412e-7■□□□□ 8.7
NKRFO15226 SEC23A-214ENST00000557437 575 ntTSL 417.41■□□□□ 0.385e-14■□□□□ 8.7
NKRFO15226 ZNF7-213ENST00000532051 540 ntTSL 417.4■□□□□ 0.382e-7■□□□□ 8.7
NKRFO15226 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.32■□□□□ 0.362e-7■□□□□ 8.7
NKRFO15226 SYNCRIP-203ENST00000444272 610 ntTSL 317.07■□□□□ 0.322e-7■□□□□ 8.7
NKRFO15226 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.74■□□□□ 0.275e-14■□□□□ 8.7
NKRFO15226 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.56■□□□□ 0.242e-7■□□□□ 8.7
NKRFO15226 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.242e-7■□□□□ 8.7
NKRFO15226 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.225e-14■□□□□ 8.7
NKRFO15226 SEC23A-212ENST00000556092 571 ntTSL 416.45■□□□□ 0.225e-14■□□□□ 8.7
NKRFO15226 ZNF7-217ENST00000533314 516 ntTSL 414.59□□□□□ -0.072e-7■□□□□ 8.7
NKRFO15226 CNOT3-210ENST00000618939 4516 ntTSL 514.44□□□□□ -0.15e-14■□□□□ 8.7
NKRFO15226 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.115e-14■□□□□ 8.7
NKRFO15226 ZNF7-204ENST00000527218 545 ntTSL 414.23□□□□□ -0.132e-7■□□□□ 8.7
NKRFO15226 ZNF7-209ENST00000529819 513 ntTSL 4 BASIC14.18□□□□□ -0.142e-7■□□□□ 8.7
NKRFO15226 ZNF7-211ENST00000530682 581 ntTSL 413.63□□□□□ -0.232e-7■□□□□ 8.7
NKRFO15226 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.392e-7■□□□□ 8.7
NKRFO15226 GNB1-202ENST00000434686 684 ntTSL 312.22□□□□□ -0.452e-7■□□□□ 8.7
NKRFO15226 ZNF7-215ENST00000532393 569 ntTSL 410.07□□□□□ -0.82e-7■□□□□ 8.7
NKRFO15226 SEC23A-210ENST00000555425 547 ntTSL 55.54□□□□□ -1.525e-14■□□□□ 8.7
NKRFO15226 SEC23A-208ENST00000555017 588 ntTSL 43.53□□□□□ -1.845e-14■□□□□ 8.7
NKRFO15226 CBX3-204ENST00000456948 1068 ntTSL 526.76■■□□□ 1.872e-11■□□□□ 8.6
NKRFO15226 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.23■□□□□ 0.352e-11■□□□□ 8.6
NKRFO15226 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.242e-11■□□□□ 8.6
NKRFO15226 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.182e-11■□□□□ 8.6
NKRFO15226 HMGN2-202ENST00000460563 1045 ntTSL 512.64□□□□□ -0.392e-7■□□□□ 8.6
NKRFO15226 HMGN2-204ENST00000464888 565 ntTSL 212.2□□□□□ -0.462e-7■□□□□ 8.6
NKRFO15226 HMGN2-203ENST00000463817 853 ntTSL 29.7□□□□□ -0.862e-7■□□□□ 8.6
NKRFO15226 HMGN2-208ENST00000479815 1030 ntTSL 59.7□□□□□ -0.862e-7■□□□□ 8.6
NKRFO15226 HMGN2-206ENST00000467700 932 ntTSL 28.58□□□□□ -1.042e-7■□□□□ 8.6
NKRFO15226 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.132e-7■□□□□ 8.6
NKRFO15226 HMGN2-207ENST00000468388 320 ntTSL 38□□□□□ -1.132e-7■□□□□ 8.6
Retrieved 100 of 9,198 protein–RNA pairs in 48 ms