RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 NISCHQ9Y2I1 1504 aa50.45■■■■■ 5.67
SEC23A-213ENST00000557280 CCDC180Q9P1Z9 1646 aa44.68■■■■■ 4.74
SEC23A-213ENST00000557280 ABCC9O60706 1549 aa43.48■■■■■ 4.55
SEC23A-213ENST00000557280 ZCCHC6Q5VYS8 1495 aaKnown RBP42.13■■■■■ 4.34
SEC23A-213ENST00000557280 DCAF8L2P0C7V8 631 aa41.97■■■■■ 4.31
SEC23A-213ENST00000557280 NACADO15069 1562 aa41.9■■■■■ 4.3
SEC23A-213ENST00000557280 RB1CC1Q8TDY2 1594 aa41.88■■■■■ 4.29
SEC23A-213ENST00000557280 MYO15BQ96JP2 1530 aa41.74■■■■■ 4.27
SEC23A-213ENST00000557280 DCAF1Q9Y4B6 1507 aa41.7■■■■■ 4.27
SEC23A-213ENST00000557280 UNC13AQ9UPW8 1703 aa41.02■■■■■ 4.16
SEC23A-213ENST00000557280 SCRIBQ14160 1630 aa40.89■■■■■ 4.14
SEC23A-213ENST00000557280 BICRAQ9NZM4 1560 aa40.7■■■■■ 4.11
SEC23A-213ENST00000557280 PABPN1Q86U42 306 aaKnown RBP eCLIP40.68■■■■■ 4.1
SEC23A-213ENST00000557280 SHROOM4Q9ULL8 1493 aa40.15■■■■■ 4.02
SEC23A-213ENST00000557280 DNAJC5BQ9UF47 199 aa39.63■■■■□ 3.93
SEC23A-213ENST00000557280 EIF4G1Q04637 1599 aaKnown RBP39.56■■■■□ 3.92
SEC23A-213ENST00000557280 CECR2Q9BXF3 1484 aa39.34■■■■□ 3.89
SEC23A-213ENST00000557280 CC2D2AQ9P2K1 1620 aa39.32■■■■□ 3.89
SEC23A-213ENST00000557280 SMARCA4P51532 1647 aa39.1■■■■□ 3.85
SEC23A-213ENST00000557280 BAZ1AQ9NRL2 1556 aaPredicted RBP39.05■■■■□ 3.84
SEC23A-213ENST00000557280 MROH2BQ7Z745 1585 aa38.95■■■■□ 3.83
SEC23A-213ENST00000557280 ATAD2BQ9ULI0 1458 aa38.79■■■■□ 3.8
SEC23A-213ENST00000557280 SMARCA2P51531 1590 aa38.7■■■■□ 3.79
SEC23A-213ENST00000557280 PEG3Q9GZU2 1588 aa38.68■■■■□ 3.78
SEC23A-213ENST00000557280 NCAPD3P42695 1498 aa38.67■■■■□ 3.78
SEC23A-213ENST00000557280 RSF1Q96T23 1441 aaPredicted RBP38.59■■■■□ 3.77
SEC23A-213ENST00000557280 WIZO95785 1651 aa38.54■■■■□ 3.76
SEC23A-213ENST00000557280 HMGXB3Q12766 1538 aa38.53■■■■□ 3.76
SEC23A-213ENST00000557280 BAZ1BQ9UIG0 1483 aaKnown RBP38.47■■■■□ 3.75
SEC23A-213ENST00000557280 TOP2AP11388 1531 aaKnown RBP38.12■■■■□ 3.69
SEC23A-213ENST00000557280 SUPT5HO00267 1087 aaKnown RBP37.83■■■■□ 3.65
SEC23A-213ENST00000557280 NESP48681 1621 aa37.76■■■■□ 3.63
SEC23A-213ENST00000557280 CCDC88BA6NC98 1476 aa37.67■■■■□ 3.62
SEC23A-213ENST00000557280 LAMC3Q9Y6N6 1575 aa37.59■■■■□ 3.61
SEC23A-213ENST00000557280 CADPSQ9ULU8 1353 aa37.56■■■■□ 3.6
SEC23A-213ENST00000557280 CFTRP13569 1480 aa37.44■■■■□ 3.58
SEC23A-213ENST00000557280 ERCC6Q03468 1493 aa37.39■■■■□ 3.58
SEC23A-213ENST00000557280 KIF21AQ7Z4S6 1674 aa37.3■■■■□ 3.56
SEC23A-213ENST00000557280 PDS5BQ9NTI5 1447 aa37.29■■■■□ 3.56
SEC23A-213ENST00000557280 PRDM2Q13029 1718 aa37.17■■■■□ 3.54
SEC23A-213ENST00000557280 FANCD2Q9BXW9 1451 aa37.17■■■■□ 3.54
SEC23A-213ENST00000557280 THOC2Q8NI27 1593 aaKnown RBP37.09■■■■□ 3.53
SEC23A-213ENST00000557280 CEP164Q9UPV0 1460 aa37.07■■■■□ 3.53
SEC23A-213ENST00000557280 MRC2Q9UBG0 1479 aa36.97■■■■□ 3.51
SEC23A-213ENST00000557280 WDR62O43379 1518 aa36.85■■■■□ 3.49
SEC23A-213ENST00000557280 CUX2O14529 1486 aa36.84■■■■□ 3.49
SEC23A-213ENST00000557280 URB2Q14146 1524 aaKnown RBP36.83■■■■□ 3.49
SEC23A-213ENST00000557280 TOPBP1Q92547 1522 aa36.63■■■■□ 3.45
SEC23A-213ENST00000557280 DNMBPQ6XZF7 1577 aa36.6■■■■□ 3.45
SEC23A-213ENST00000557280 CUX1P39880 1505 aa36.51■■■■□ 3.44
SEC23A-213ENST00000557280 ABCC8Q09428 1581 aa36.51■■■■□ 3.44
SEC23A-213ENST00000557280 POLA1P09884 1462 aaPredicted RBP36.35■■■■□ 3.41
SEC23A-213ENST00000557280 WRNQ14191 1432 aaPredicted RBP eCLIP36.34■■■■□ 3.41
SEC23A-213ENST00000557280 SYNJ1O43426 1573 aa36.32■■■■□ 3.4
SEC23A-213ENST00000557280 FGD5Q6ZNL6 1462 aa36.31■■■■□ 3.4
SEC23A-213ENST00000557280 IFT140Q96RY7 1462 aa36.27■■■■□ 3.4
SEC23A-213ENST00000557280 TOP2BQ02880 1626 aa36.24■■■■□ 3.39
SEC23A-213ENST00000557280 BIVM-ERCC5R4GMW8 1640 aa36.24■■■■□ 3.39
SEC23A-213ENST00000557280 RAD54L2Q9Y4B4 1467 aa36.22■■■■□ 3.39
SEC23A-213ENST00000557280 TARBP1Q13395 1621 aaKnown RBP36.22■■■■□ 3.39
SEC23A-213ENST00000557280 ZNF608Q9ULD9 1512 aaPredicted RBP36.18■■■■□ 3.38
SEC23A-213ENST00000557280 SOGA1O94964 1423 aa36.15■■■■□ 3.38
SEC23A-213ENST00000557280 EIF4G3O43432 1585 aaKnown RBP36.03■■■■□ 3.36
SEC23A-213ENST00000557280 WDR97A6NE52 1622 aa36.02■■■■□ 3.36
SEC23A-213ENST00000557280 AQRO60306 1485 aaKnown RBP eCLIP35.98■■■■□ 3.355e-7■■■■■ 27.6
SEC23A-213ENST00000557280 TDRD9Q8NDG6 1382 aaKnown RBP35.95■■■■□ 3.35
SEC23A-213ENST00000557280 ABCA10Q8WWZ4 1543 aa35.94■■■■□ 3.34
SEC23A-213ENST00000557280 ABCA5Q8WWZ7 1642 aa35.82■■■■□ 3.32
SEC23A-213ENST00000557280 GAPVD1Q14C86 1478 aa35.75■■■■□ 3.31
SEC23A-213ENST00000557280 PBRM1Q86U86 1689 aa35.7■■■■□ 3.31
SEC23A-213ENST00000557280 GRIN2BQ13224 1484 aa35.69■■■■□ 3.3
SEC23A-213ENST00000557280 SNAPC4Q5SXM2 1469 aa35.67■■■■□ 3.3
SEC23A-213ENST00000557280 TRIM41Q8WV44 630 aa35.65■■■■□ 3.3
SEC23A-213ENST00000557280 MAGI1Q96QZ7 1491 aaPredicted RBP35.56■■■■□ 3.28
SEC23A-213ENST00000557280 KIF27Q86VH2 1401 aa35.51■■■■□ 3.28
SEC23A-213ENST00000557280 CHD1O14646 1710 aa35.51■■■■□ 3.27
SEC23A-213ENST00000557280 CHIC1Q5VXU3 224 aa35.5■■■■□ 3.27
SEC23A-213ENST00000557280 ERICH3Q5RHP9 1530 aa35.5■■■■□ 3.27
SEC23A-213ENST00000557280 ADAMTS12P58397 1594 aa35.46■■■■□ 3.27
SEC23A-213ENST00000557280 SYNJ2O15056 1496 aa35.43■■■■□ 3.26
SEC23A-213ENST00000557280 RUSC2Q8N2Y8 1516 aa35.42■■■■□ 3.26
SEC23A-213ENST00000557280 FBLN2P98095 1184 aa35.41■■■■□ 3.26
SEC23A-213ENST00000557280 IGF1RP08069 1367 aa35.37■■■■□ 3.25
SEC23A-213ENST00000557280 FHAD1B1AJZ9 1412 aa35.34■■■■□ 3.25
SEC23A-213ENST00000557280 CHMP7Q8WUX9 453 aaPredicted RBP35.34■■■■□ 3.25
SEC23A-213ENST00000557280 OSCARQ8IYS5 282 aa35.33■■■■□ 3.25
SEC23A-213ENST00000557280 DNAJC5Q9H3Z4 198 aa35.31■■■■□ 3.24
SEC23A-213ENST00000557280 GRIN2AQ12879 1464 aa35.27■■■■□ 3.24
SEC23A-213ENST00000557280 CUL7Q14999 1698 aa35.24■■■■□ 3.23
SEC23A-213ENST00000557280 CARMIL1Q5VZK9 1371 aa35.14■■■■□ 3.22
SEC23A-213ENST00000557280 CEP170Q5SW79 1584 aa35.13■■■■□ 3.21
SEC23A-213ENST00000557280 CLASP1Q7Z460 1538 aa35.12■■■■□ 3.21
SEC23A-213ENST00000557280 NUP160Q12769 1436 aa35.1■■■■□ 3.21
SEC23A-213ENST00000557280 EEA1Q15075 1411 aa35.01■■■■□ 3.2
SEC23A-213ENST00000557280 FAM9AQ8IZU1 332 aaPredicted RBP34.99■■■■□ 3.19
SEC23A-213ENST00000557280 PRXQ9BXM0 1461 aa34.97■■■■□ 3.19
SEC23A-213ENST00000557280 RAPGEF2Q9Y4G8 1499 aa34.97■■■■□ 3.19
SEC23A-213ENST00000557280 CSRNP3Q8WYN3 585 aa34.94■■■■□ 3.18
SEC23A-213ENST00000557280 ARHGEF11O15085 1522 aa34.87■■■■□ 3.17
SEC23A-213ENST00000557280 RIMBP3CA6NJZ7 1639 aa34.85■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms