RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 AEBP2Q6ZN18 517 aaPredicted RBP12.19□□□□□ -0.46
PTPN9-204ENST00000564970 POTEDQ86YR6 584 aa11.63□□□□□ -0.55
PTPN9-204ENST00000564970 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
PTPN9-204ENST00000564970 MYT1Q01538 1121 aa11.57□□□□□ -0.56
PTPN9-204ENST00000564970 CHIC1Q5VXU3 224 aa11.57□□□□□ -0.56
PTPN9-204ENST00000564970 TTBK1Q5TCY1 1321 aaPredicted RBP11.19□□□□□ -0.62
PTPN9-204ENST00000564970 SENP3Q9H4L4 574 aaPredicted RBP10.77□□□□□ -0.69
PTPN9-204ENST00000564970 HRCP23327 699 aa10.44□□□□□ -0.74
PTPN9-204ENST00000564970 ERICH6Q7L0X2 663 aa10.44□□□□□ -0.74
PTPN9-204ENST00000564970 PHF23Q9BUL5 403 aaPredicted RBP10.37□□□□□ -0.75
PTPN9-204ENST00000564970 APLP2Q06481 763 aa10.2□□□□□ -0.78
PTPN9-204ENST00000564970 DNAJC5BQ9UF47 199 aa10.12□□□□□ -0.79
PTPN9-204ENST00000564970 SLC24A1O60721 1099 aa10.11□□□□□ -0.79
PTPN9-204ENST00000564970 PRKCSHP14314 528 aaPredicted RBP10.09□□□□□ -0.79
PTPN9-204ENST00000564970 FOXD1Q16676 465 aa10.06□□□□□ -0.8
PTPN9-204ENST00000564970 MSH5O43196 834 aa10.02□□□□□ -0.81
PTPN9-204ENST00000564970 CENPBP07199 599 aaPredicted RBP10.01□□□□□ -0.81
PTPN9-204ENST00000564970 SCAF1Q9H7N4 1312 aaKnown RBP10□□□□□ -0.81
PTPN9-204ENST00000564970 BCL11AQ9H165 835 aa9.96□□□□□ -0.82
PTPN9-204ENST00000564970 ZEB1P37275 1124 aaPredicted RBP9.95□□□□□ -0.82
PTPN9-204ENST00000564970 DNAJC5Q9H3Z4 198 aa9.9□□□□□ -0.82
PTPN9-204ENST00000564970 DAXXQ9UER7 740 aaPredicted RBP9.86□□□□□ -0.83
PTPN9-204ENST00000564970 ABCC9O60706 1549 aa9.82□□□□□ -0.84
PTPN9-204ENST00000564970 ACIN1Q9UKV3 1341 aaKnown RBP9.79□□□□□ -0.84
PTPN9-204ENST00000564970 FAM9AQ8IZU1 332 aaPredicted RBP9.7□□□□□ -0.86
PTPN9-204ENST00000564970 CLSPNQ9HAW4 1339 aa9.69□□□□□ -0.86
PTPN9-204ENST00000564970 DCAF1Q9Y4B6 1507 aa9.68□□□□□ -0.86
PTPN9-204ENST00000564970 ANP32EQ9BTT0 268 aa9.67□□□□□ -0.86
PTPN9-204ENST00000564970 CCDC180Q9P1Z9 1646 aa9.64□□□□□ -0.87
PTPN9-204ENST00000564970 PPARGC1BQ86YN6 1023 aaKnown RBP9.64□□□□□ -0.87
PTPN9-204ENST00000564970 NISCHQ9Y2I1 1504 aa9.64□□□□□ -0.87
PTPN9-204ENST00000564970 MYT1LQ9UL68 1186 aa9.6□□□□□ -0.87
PTPN9-204ENST00000564970 PCGF6Q9BYE7 350 aa9.59□□□□□ -0.87
PTPN9-204ENST00000564970 GTF3C3Q9Y5Q9 886 aa9.55□□□□□ -0.88
PTPN9-204ENST00000564970 EIF5BO60841 1220 aaKnown RBP9.52□□□□□ -0.89
PTPN9-204ENST00000564970 TRIM26Q12899 539 aaPredicted RBP9.49□□□□□ -0.89
PTPN9-204ENST00000564970 NEUROD1Q13562 356 aa9.49□□□□□ -0.89
PTPN9-204ENST00000564970 UBE2Q2Q8WVN8 375 aa9.46□□□□□ -0.9
PTPN9-204ENST00000564970 ERICH6BQ5W0A0 696 aa9.45□□□□□ -0.9
PTPN9-204ENST00000564970 MYO15BQ96JP2 1530 aa9.32□□□□□ -0.92
PTPN9-204ENST00000564970 CSRNP3Q8WYN3 585 aa9.32□□□□□ -0.92
PTPN9-204ENST00000564970 CACNB1Q02641 598 aaPredicted RBP9.24□□□□□ -0.93
PTPN9-204ENST00000564970 DIEXFQ68CQ4 756 aaKnown RBP9.2□□□□□ -0.94
PTPN9-204ENST00000564970 PIAS4Q8N2W9 510 aaPredicted RBP9.17□□□□□ -0.94
PTPN9-204ENST00000564970 TSHZ2Q9NRE2 1034 aa9.15□□□□□ -0.94
PTPN9-204ENST00000564970 RANGAP1P46060 587 aaPredicted RBP9.14□□□□□ -0.95
PTPN9-204ENST00000564970 PKNOX2Q96KN3 472 aa9.13□□□□□ -0.95
PTPN9-204ENST00000564970 NEFLP07196 543 aa9.11□□□□□ -0.95
PTPN9-204ENST00000564970 GLIPR1L2Q4G1C9 344 aa9.1□□□□□ -0.95
PTPN9-204ENST00000564970 CCER1Q8TC90 406 aaPredicted RBP9.09□□□□□ -0.95
PTPN9-204ENST00000564970 PODXL2Q9NZ53 605 aa9.09□□□□□ -0.95
PTPN9-204ENST00000564970 ARXQ96QS3 562 aa9.08□□□□□ -0.96
PTPN9-204ENST00000564970 NCBP3Q53F19 620 aaKnown RBP9.07□□□□□ -0.96
PTPN9-204ENST00000564970 TRIM41Q8WV44 630 aa9.07□□□□□ -0.96
PTPN9-204ENST00000564970 ANO8Q9HCE9 1232 aaPredicted RBP9.06□□□□□ -0.96
PTPN9-204ENST00000564970 FANCIQ9NVI1 1328 aa9.05□□□□□ -0.96
PTPN9-204ENST00000564970 SUPT16HQ9Y5B9 1047 aaKnown RBP9.03□□□□□ -0.96
PTPN9-204ENST00000564970 PABPN1Q86U42 306 aaKnown RBP eCLIP9□□□□□ -0.97
PTPN9-204ENST00000564970 YTHDC1Q96MU7 727 aaKnown RBP8.99□□□□□ -0.97
PTPN9-204ENST00000564970 ZNF316A6NFI3 1004 aaPredicted RBP8.97□□□□□ -0.97
PTPN9-204ENST00000564970 RB1CC1Q8TDY2 1594 aa8.97□□□□□ -0.97
PTPN9-204ENST00000564970 CECR2Q9BXF3 1484 aa8.96□□□□□ -0.97
PTPN9-204ENST00000564970 DEKP35659 375 aaKnown RBP8.95□□□□□ -0.98
PTPN9-204ENST00000564970 POTEHQ6S545 545 aa8.91□□□□□ -0.98
PTPN9-204ENST00000564970 SALL2Q9Y467 1007 aaPredicted RBP8.91□□□□□ -0.98
PTPN9-204ENST00000564970 RBM19Q9Y4C8 960 aaKnown RBP8.9□□□□□ -0.98
PTPN9-204ENST00000564970 RSPH6AQ9H0K4 717 aa8.88□□□□□ -0.99
PTPN9-204ENST00000564970 PLEKHG5O94827 1062 aa8.87□□□□□ -0.99
PTPN9-204ENST00000564970 CUX2O14529 1486 aa8.87□□□□□ -0.99
PTPN9-204ENST00000564970 CC2D2AQ9P2K1 1620 aa8.85□□□□□ -0.99
PTPN9-204ENST00000564970 C11orf95C9JLR9 678 aaPredicted RBP8.85□□□□□ -0.99
PTPN9-204ENST00000564970 BICRAQ9NZM4 1560 aa8.85□□□□□ -0.99
PTPN9-204ENST00000564970 ZNF326Q5BKZ1 582 aaKnown RBP8.83□□□□□ -1
PTPN9-204ENST00000564970 PDIA4P13667 645 aaKnown RBP8.81□□□□□ -1
PTPN9-204ENST00000564970 PDE4CQ08493 712 aa8.8□□□□□ -1
PTPN9-204ENST00000564970 USP35Q9P2H5 1018 aa8.78□□□□□ -1
PTPN9-204ENST00000564970 UNC13AQ9UPW8 1703 aa8.77□□□□□ -1
PTPN9-204ENST00000564970 TAF7LQ5H9L4 462 aa8.77□□□□□ -1.01
PTPN9-204ENST00000564970 RTL5Q5HYW3 569 aaPredicted RBP8.77□□□□□ -1.01
PTPN9-204ENST00000564970 FGD1P98174 961 aa8.76□□□□□ -1.01
PTPN9-204ENST00000564970 SUPT5HO00267 1087 aaKnown RBP8.74□□□□□ -1.01
PTPN9-204ENST00000564970 MIER1Q8N108 512 aa8.74□□□□□ -1.01
PTPN9-204ENST00000564970 NACADO15069 1562 aa8.73□□□□□ -1.01
PTPN9-204ENST00000564970 CCDC136Q96JN2 1154 aa8.71□□□□□ -1.02
PTPN9-204ENST00000564970 EHMT2Q96KQ7 1210 aa8.71□□□□□ -1.02
PTPN9-204ENST00000564970 CDK11AQ9UQ88 783 aaPredicted RBP8.71□□□□□ -1.02
PTPN9-204ENST00000564970 ZMYND15Q9H091 742 aa8.7□□□□□ -1.02
PTPN9-204ENST00000564970 HOMEZQ8IX15 550 aa8.69□□□□□ -1.02
PTPN9-204ENST00000564970 RRP9O43818 475 aaKnown RBP8.68□□□□□ -1.02
PTPN9-204ENST00000564970 AAMPQ13685 434 aa8.67□□□□□ -1.02
PTPN9-204ENST00000564970 NOP58Q9Y2X3 529 aaKnown RBP8.67□□□□□ -1.02
PTPN9-204ENST00000564970 WASHC2CQ9Y4E1 1318 aa8.66□□□□□ -1.02
PTPN9-204ENST00000564970 WASHC2AQ641Q2 1341 aa8.64□□□□□ -1.03
PTPN9-204ENST00000564970 NCLP19338 710 aaKnown RBP8.64□□□□□ -1.03
PTPN9-204ENST00000564970 EIF4G1Q04637 1599 aaKnown RBP8.64□□□□□ -1.03
PTPN9-204ENST00000564970 FAM43AQ8N2R8 423 aa8.63□□□□□ -1.03
PTPN9-204ENST00000564970 LOC105371045A0A1W2PR82 267 aa8.62□□□□□ -1.03
PTPN9-204ENST00000564970 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.61□□□□□ -1.03
PTPN9-204ENST00000564970 VSIG10Q8N0Z9 540 aa8.61□□□□□ -1.03
PTPN9-204ENST00000564970 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms