RNA–Protein interactions for RNA: ENST00000555017.5

SEC23A-208, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-208ENST00000555017 AEBP2Q6ZN18 517 aaPredicted RBP13.83□□□□□ -0.2
SEC23A-208ENST00000555017 CHIC1Q5VXU3 224 aa13.13□□□□□ -0.31
SEC23A-208ENST00000555017 POTEDQ86YR6 584 aa12.2□□□□□ -0.46
SEC23A-208ENST00000555017 SENP3Q9H4L4 574 aaPredicted RBP11.99□□□□□ -0.49
SEC23A-208ENST00000555017 PHF23Q9BUL5 403 aaPredicted RBP11.7□□□□□ -0.54
SEC23A-208ENST00000555017 FOXD1Q16676 465 aa11.26□□□□□ -0.61
SEC23A-208ENST00000555017 MSH5O43196 834 aa10.93□□□□□ -0.66
SEC23A-208ENST00000555017 PLPPR3Q6T4P5 718 aa10.57□□□□□ -0.72
SEC23A-208ENST00000555017 PPP6R1Q9UPN7 881 aa10.33□□□□□ -0.76
SEC23A-208ENST00000555017 ADRA2BP18089 450 aa10.29□□□□□ -0.76
SEC23A-208ENST00000555017 PIAS4Q8N2W9 510 aaPredicted RBP10.29□□□□□ -0.76
SEC23A-208ENST00000555017 CACNB1Q02641 598 aaPredicted RBP9.92□□□□□ -0.82
SEC23A-208ENST00000555017 MAPK8IP2Q13387 824 aaPredicted RBP9.39□□□□□ -0.91
SEC23A-208ENST00000555017 POTEHQ6S545 545 aa9.39□□□□□ -0.91
SEC23A-208ENST00000555017 PPP4R3CPQ6ZMV5 832 aa9.39□□□□□ -0.91
SEC23A-208ENST00000555017 DMRT2Q9Y5R5 561 aa9.36□□□□□ -0.91
SEC23A-208ENST00000555017 RNF39Q9H2S5 420 aa9.22□□□□□ -0.93
SEC23A-208ENST00000555017 SCAF1Q9H7N4 1312 aaKnown RBP9.19□□□□□ -0.94
SEC23A-208ENST00000555017 KCNA4P22459 653 aa9.18□□□□□ -0.94
SEC23A-208ENST00000555017 CNKSR2Q8WXI2 1034 aa9.07□□□□□ -0.96
SEC23A-208ENST00000555017 C1QBPQ07021 282 aaKnown RBP9.06□□□□□ -0.96
SEC23A-208ENST00000555017 NPM3O75607 178 aaKnown RBP9.01□□□□□ -0.97
SEC23A-208ENST00000555017 NCBP3Q53F19 620 aaKnown RBP8.99□□□□□ -0.97
SEC23A-208ENST00000555017 DCAF8L1A6NGE4 600 aa8.98□□□□□ -0.97
SEC23A-208ENST00000555017 HOXD11P31277 338 aaPredicted RBP8.9□□□□□ -0.98
SEC23A-208ENST00000555017 RNF216Q9NWF9 866 aaPredicted RBP8.9□□□□□ -0.98
SEC23A-208ENST00000555017 SLC4A1APQ9BWU0 796 aaKnown RBP8.65□□□□□ -1.02
SEC23A-208ENST00000555017 DNAJC5BQ9UF47 199 aa8.6□□□□□ -1.03
SEC23A-208ENST00000555017 SLC4A2P04920 1241 aa8.56□□□□□ -1.04
SEC23A-208ENST00000555017 ZBTB22O15209 634 aa8.49□□□□□ -1.05
SEC23A-208ENST00000555017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.48□□□□□ -1.05
SEC23A-208ENST00000555017 EHMT2Q96KQ7 1210 aa8.42□□□□□ -1.06
SEC23A-208ENST00000555017 U3KPZ7 1027 aaPredicted RBP8.4□□□□□ -1.06
SEC23A-208ENST00000555017 SP7Q8TDD2 431 aaPredicted RBP8.37□□□□□ -1.07
SEC23A-208ENST00000555017 CSRNP3Q8WYN3 585 aa8.35□□□□□ -1.07
SEC23A-208ENST00000555017 FOXD4L1Q9NU39 408 aa8.34□□□□□ -1.07
SEC23A-208ENST00000555017 DSG3P32926 999 aa8.32□□□□□ -1.08
SEC23A-208ENST00000555017 MYCNP04198 464 aaPredicted RBP8.23□□□□□ -1.09
SEC23A-208ENST00000555017 SPINK5Q9NQ38 1064 aaPredicted RBP8.22□□□□□ -1.09
SEC23A-208ENST00000555017 ATF5Q9Y2D1 282 aaPredicted RBP8.21□□□□□ -1.1
SEC23A-208ENST00000555017 CHRDL2Q6WN34 429 aa8.15□□□□□ -1.1
SEC23A-208ENST00000555017 CAPN15O75808 1086 aa8.14□□□□□ -1.11
SEC23A-208ENST00000555017 TRHP20396 242 aaPredicted RBP8.1□□□□□ -1.11
SEC23A-208ENST00000555017 SAMD1Q6SPF0 538 aaPredicted RBP8.1□□□□□ -1.11
SEC23A-208ENST00000555017 PLSCR2Q9NRY7 297 aa8.09□□□□□ -1.11
SEC23A-208ENST00000555017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.08□□□□□ -1.12
SEC23A-208ENST00000555017 HNRNPUL2Q1KMD3 747 aaKnown RBP8.08□□□□□ -1.12
SEC23A-208ENST00000555017 ABCB7O75027 752 aa8.03□□□□□ -1.12
SEC23A-208ENST00000555017 ATXN8OSP0DMR3 200 aa7.99□□□□□ -1.13
SEC23A-208ENST00000555017 RBM42Q9BTD8 480 aaKnown RBP7.99□□□□□ -1.13
SEC23A-208ENST00000555017 APLP2Q06481 763 aa7.96□□□□□ -1.14
SEC23A-208ENST00000555017 ZNF219Q9P2Y4 722 aaPredicted RBP7.96□□□□□ -1.14
SEC23A-208ENST00000555017 POLA2Q14181 598 aa7.95□□□□□ -1.14
SEC23A-208ENST00000555017 HAX1O00165 279 aa7.88□□□□□ -1.15
SEC23A-208ENST00000555017 LHX8Q68G74 356 aa7.84□□□□□ -1.15
SEC23A-208ENST00000555017 MKRN4PQ13434 485 aaPredicted RBP7.8□□□□□ -1.16
SEC23A-208ENST00000555017 PIP4P2Q8N4L2 257 aa7.76□□□□□ -1.17
SEC23A-208ENST00000555017 EVX2Q03828 476 aa7.68□□□□□ -1.18
SEC23A-208ENST00000555017 OSCARQ8IYS5 282 aa7.68□□□□□ -1.18
SEC23A-208ENST00000555017 FBLN2P98095 1184 aa7.65□□□□□ -1.18
SEC23A-208ENST00000555017 ZBTB12Q9Y330 459 aaPredicted RBP7.63□□□□□ -1.19
SEC23A-208ENST00000555017 AKT1S1Q96B36 256 aa7.61□□□□□ -1.19
SEC23A-208ENST00000555017 FXR2P51116 673 aaKnown RBP eCLIP7.58□□□□□ -1.22e-7■■■□□ 16
SEC23A-208ENST00000555017 REM2Q8IYK8 340 aaPredicted RBP7.52□□□□□ -1.21
SEC23A-208ENST00000555017 SPDYE4A6NLX3 237 aa7.51□□□□□ -1.21
SEC23A-208ENST00000555017 FKBP8Q14318 412 aa7.51□□□□□ -1.21
SEC23A-208ENST00000555017 ZNF692Q9BU19 519 aaPredicted RBP7.51□□□□□ -1.21
SEC23A-208ENST00000555017 SPDYE2BA6NHP3 402 aa7.5□□□□□ -1.21
SEC23A-208ENST00000555017 SPDYE6P0CI01 402 aa7.5□□□□□ -1.21
SEC23A-208ENST00000555017 SPDYE2Q495Y8 402 aa7.5□□□□□ -1.21
SEC23A-208ENST00000555017 GABBR2O75899 941 aa7.49□□□□□ -1.21
SEC23A-208ENST00000555017 SSUH2Q9Y2M2 353 aa7.49□□□□□ -1.21
SEC23A-208ENST00000555017 PABPN1Q86U42 306 aaKnown RBP eCLIP7.45□□□□□ -1.22
SEC23A-208ENST00000555017 PITPNM1O00562 1244 aa7.43□□□□□ -1.22
SEC23A-208ENST00000555017 POTEMA6NI47 508 aa7.42□□□□□ -1.22
SEC23A-208ENST00000555017 PCDH10Q9P2E7 1040 aa7.42□□□□□ -1.22
SEC23A-208ENST00000555017 C19orf67A6NJJ6 358 aa7.37□□□□□ -1.23
SEC23A-208ENST00000555017 PROM2Q8N271 834 aa7.37□□□□□ -1.23
SEC23A-208ENST00000555017 POTEGQ6S5H5 508 aa7.36□□□□□ -1.23
SEC23A-208ENST00000555017 CLEC11AQ9Y240 323 aa7.35□□□□□ -1.23
SEC23A-208ENST00000555017 NISCHQ9Y2I1 1504 aa7.31□□□□□ -1.24
SEC23A-208ENST00000555017 POTEIP0CG38 1075 aa7.3□□□□□ -1.24
SEC23A-208ENST00000555017 SPDYE1Q8NFV5 336 aaPredicted RBP7.3□□□□□ -1.24
SEC23A-208ENST00000555017 PRKAR2AP13861 404 aaKnown RBP7.24□□□□□ -1.25
SEC23A-208ENST00000555017 CHADLQ6NUI6 762 aa7.24□□□□□ -1.25
SEC23A-208ENST00000555017 PRR29P0C7W0 189 aa7.22□□□□□ -1.25
SEC23A-208ENST00000555017 OTUD5Q96G74 571 aa7.22□□□□□ -1.25
SEC23A-208ENST00000555017 CREBZFQ9NS37 354 aa7.19□□□□□ -1.26
SEC23A-208ENST00000555017 STAG3Q9UJ98 1225 aa7.17□□□□□ -1.26
SEC23A-208ENST00000555017 CLCN6P51797 869 aa7.13□□□□□ -1.27
SEC23A-208ENST00000555017 MIER1Q8N108 512 aa7.13□□□□□ -1.27
SEC23A-208ENST00000555017 MNX1P50219 401 aaPredicted RBP7.12□□□□□ -1.27
SEC23A-208ENST00000555017 VASPP50552 380 aaPredicted RBP7.12□□□□□ -1.27
SEC23A-208ENST00000555017 FBXO3Q9UK99 471 aa7.11□□□□□ -1.27
SEC23A-208ENST00000555017 IFNLR1Q8IU57 520 aaPredicted RBP7.09□□□□□ -1.27
SEC23A-208ENST00000555017 PLCD3Q8N3E9 789 aa7.09□□□□□ -1.27
SEC23A-208ENST00000555017 DCBLD2Q96PD2 775 aa7.09□□□□□ -1.27
SEC23A-208ENST00000555017 FARP1Q9Y4F1 1045 aaPredicted RBP7.08□□□□□ -1.28
SEC23A-208ENST00000555017 POTEB2H3BUK9 544 aa7.04□□□□□ -1.28
SEC23A-208ENST00000555017 KLHL34Q8N239 644 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms