RNA–Protein interactions for RNA: ENST00000369682.4

PLXNA3-201, Transcript of plexin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA3, Length 10,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-201ENST00000369682 DCAF8L2P0C7V8 631 aa19.68■□□□□ 0.74
PLXNA3-201ENST00000369682 SUPT5HO00267 1087 aaKnown RBP19.23■□□□□ 0.67
PLXNA3-201ENST00000369682 EHMT2Q96KQ7 1210 aa19.17■□□□□ 0.66
PLXNA3-201ENST00000369682 SHROOM4Q9ULL8 1493 aa19.06■□□□□ 0.64
PLXNA3-201ENST00000369682 NISCHQ9Y2I1 1504 aa19.02■□□□□ 0.64
PLXNA3-201ENST00000369682 TTBK1Q5TCY1 1321 aaPredicted RBP18.57■□□□□ 0.56
PLXNA3-201ENST00000369682 PCGF6Q9BYE7 350 aa18.55■□□□□ 0.56
PLXNA3-201ENST00000369682 FAM9AQ8IZU1 332 aaPredicted RBP18.27■□□□□ 0.52
PLXNA3-201ENST00000369682 PELP1Q8IZL8 1130 aaKnown RBP18.17■□□□□ 0.5
PLXNA3-201ENST00000369682 YTHDC1Q96MU7 727 aaKnown RBP18.08■□□□□ 0.49
PLXNA3-201ENST00000369682 RANGAP1P46060 587 aaPredicted RBP17.96■□□□□ 0.46
PLXNA3-201ENST00000369682 PPARGC1BQ86YN6 1023 aaKnown RBP17.92■□□□□ 0.46
PLXNA3-201ENST00000369682 CENPBP07199 599 aaPredicted RBP17.83■□□□□ 0.44
PLXNA3-201ENST00000369682 ERICH6Q7L0X2 663 aa17.81■□□□□ 0.44
PLXNA3-201ENST00000369682 CCER1Q8TC90 406 aaPredicted RBP17.8■□□□□ 0.44
PLXNA3-201ENST00000369682 APLP2Q06481 763 aa17.75■□□□□ 0.43
PLXNA3-201ENST00000369682 MYT1Q01538 1121 aa17.61■□□□□ 0.41
PLXNA3-201ENST00000369682 HRCP23327 699 aa17.56■□□□□ 0.4
PLXNA3-201ENST00000369682 ZEB1P37275 1124 aaPredicted RBP17.54■□□□□ 0.4
PLXNA3-201ENST00000369682 TRIM41Q8WV44 630 aa17.46■□□□□ 0.38
PLXNA3-201ENST00000369682 ATP1B4Q9UN42 357 aaPredicted RBP17.4■□□□□ 0.38
PLXNA3-201ENST00000369682 LOC105371045A0A1W2PR82 267 aa17.39■□□□□ 0.38
PLXNA3-201ENST00000369682 NEFLP07196 543 aa17.37■□□□□ 0.37
PLXNA3-201ENST00000369682 UBTFP17480 764 aaKnown RBP17.33■□□□□ 0.36
PLXNA3-201ENST00000369682 TRIM26Q12899 539 aaPredicted RBP17.24■□□□□ 0.35
PLXNA3-201ENST00000369682 CNGB1Q14028 1251 aaPredicted RBP17.22■□□□□ 0.35
PLXNA3-201ENST00000369682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.14■□□□□ 0.34
PLXNA3-201ENST00000369682 ITGAEP38570 1179 aa17.14■□□□□ 0.33
PLXNA3-201ENST00000369682 HNRNPUL2Q1KMD3 747 aaKnown RBP17.09■□□□□ 0.33
PLXNA3-201ENST00000369682 BCANQ96GW7 911 aa17.09■□□□□ 0.33
PLXNA3-201ENST00000369682 POLR3GLQ9BT43 218 aa17.07■□□□□ 0.32
PLXNA3-201ENST00000369682 GTF3C3Q9Y5Q9 886 aa17■□□□□ 0.31
PLXNA3-201ENST00000369682 CHIC1Q5VXU3 224 aa16.99■□□□□ 0.31
PLXNA3-201ENST00000369682 DIEXFQ68CQ4 756 aaKnown RBP16.96■□□□□ 0.31
PLXNA3-201ENST00000369682 DAXXQ9UER7 740 aaPredicted RBP16.82■□□□□ 0.28
PLXNA3-201ENST00000369682 RTL5Q5HYW3 569 aaPredicted RBP16.65■□□□□ 0.26
PLXNA3-201ENST00000369682 ACIN1Q9UKV3 1341 aaKnown RBP16.6■□□□□ 0.25
PLXNA3-201ENST00000369682 NEUROD1Q13562 356 aa16.59■□□□□ 0.25
PLXNA3-201ENST00000369682 ZNF316A6NFI3 1004 aaPredicted RBP16.57■□□□□ 0.24
PLXNA3-201ENST00000369682 SCAF1Q9H7N4 1312 aaKnown RBP16.53■□□□□ 0.24
PLXNA3-201ENST00000369682 CLSPNQ9HAW4 1339 aa16.47■□□□□ 0.23
PLXNA3-201ENST00000369682 FAM50AQ14320 339 aaKnown RBP16.46■□□□□ 0.23
PLXNA3-201ENST00000369682 SLC4A1APQ9BWU0 796 aaKnown RBP16.45■□□□□ 0.22
PLXNA3-201ENST00000369682 BCL11AQ9H165 835 aa16.44■□□□□ 0.22
PLXNA3-201ENST00000369682 NPM2Q86SE8 214 aaKnown RBP16.38■□□□□ 0.21
PLXNA3-201ENST00000369682 MYT1LQ9UL68 1186 aa16.36■□□□□ 0.21
PLXNA3-201ENST00000369682 ZNF326Q5BKZ1 582 aaKnown RBP16.36■□□□□ 0.21
PLXNA3-201ENST00000369682 CDK11AQ9UQ88 783 aaPredicted RBP16.34■□□□□ 0.21
PLXNA3-201ENST00000369682 EIF5BO60841 1220 aaKnown RBP16.28■□□□□ 0.2
PLXNA3-201ENST00000369682 NBR1Q14596 966 aa16.28■□□□□ 0.2
PLXNA3-201ENST00000369682 TRIM52Q96A61 297 aa16.26■□□□□ 0.19
PLXNA3-201ENST00000369682 ANP32CO43423 234 aa16.25■□□□□ 0.19
PLXNA3-201ENST00000369682 FKBP8Q14318 412 aa16.25■□□□□ 0.19
PLXNA3-201ENST00000369682 ABCC9O60706 1549 aa16.21■□□□□ 0.19
PLXNA3-201ENST00000369682 IRX6P78412 446 aaPredicted RBP16.2■□□□□ 0.18
PLXNA3-201ENST00000369682 MYO15BQ96JP2 1530 aa16.18■□□□□ 0.18
PLXNA3-201ENST00000369682 ARXQ96QS3 562 aa16.15■□□□□ 0.18
PLXNA3-201ENST00000369682 ARID3CA6NKF2 412 aa16.15■□□□□ 0.18
PLXNA3-201ENST00000369682 SCRIBQ14160 1630 aa16.14■□□□□ 0.17
PLXNA3-201ENST00000369682 ANP32AP39687 249 aaKnown RBP16.08■□□□□ 0.16
PLXNA3-201ENST00000369682 MIER1Q8N108 512 aa16.07■□□□□ 0.16
PLXNA3-201ENST00000369682 SENP3-EIF4A1A0A087X0R7 540 aa16.07■□□□□ 0.16
PLXNA3-201ENST00000369682 PABPN1Q86U42 306 aaKnown RBP eCLIP16.07■□□□□ 0.162e-6■■■■□ 19.8
PLXNA3-201ENST00000369682 P3H3Q8IVL6 736 aa16.04■□□□□ 0.16
PLXNA3-201ENST00000369682 CANXP27824 592 aaKnown RBP16.03■□□□□ 0.16
PLXNA3-201ENST00000369682 HIRIP3Q9BW71 556 aaPredicted RBP16.02■□□□□ 0.15
PLXNA3-201ENST00000369682 DDX10Q13206 875 aaKnown RBP16.01■□□□□ 0.15
PLXNA3-201ENST00000369682 SALL2Q9Y467 1007 aaPredicted RBP15.99■□□□□ 0.15
PLXNA3-201ENST00000369682 DCAF1Q9Y4B6 1507 aa15.96■□□□□ 0.14
PLXNA3-201ENST00000369682 FAM9BQ8IZU0 186 aa15.95■□□□□ 0.14
PLXNA3-201ENST00000369682 HNRNPUQ00839 825 aaKnown RBP eCLIP15.95■□□□□ 0.14
PLXNA3-201ENST00000369682 CCDC180Q9P1Z9 1646 aa15.92■□□□□ 0.14
PLXNA3-201ENST00000369682 RTN4Q9NQC3 1192 aaKnown RBP15.91■□□□□ 0.14
PLXNA3-201ENST00000369682 SLC24A1O60721 1099 aa15.86■□□□□ 0.13
PLXNA3-201ENST00000369682 ZCCHC6Q5VYS8 1495 aaKnown RBP15.8■□□□□ 0.12
PLXNA3-201ENST00000369682 ZBTB47Q9UFB7 747 aaPredicted RBP15.76■□□□□ 0.11
PLXNA3-201ENST00000369682 CCDC136Q96JN2 1154 aa15.76■□□□□ 0.11
PLXNA3-201ENST00000369682 ANP32EQ9BTT0 268 aa15.74■□□□□ 0.11
PLXNA3-201ENST00000369682 ZNF777Q9ULD5 760 aaPredicted RBP15.71■□□□□ 0.11
PLXNA3-201ENST00000369682 LAS1LQ9Y4W2 734 aaKnown RBP15.71■□□□□ 0.1
PLXNA3-201ENST00000369682 SENP3Q9H4L4 574 aaPredicted RBP15.7■□□□□ 0.1
PLXNA3-201ENST00000369682 TONSLQ96HA7 1378 aa15.7■□□□□ 0.1
PLXNA3-201ENST00000369682 HSP90AA1P07900 732 aaKnown RBP15.69■□□□□ 0.1
PLXNA3-201ENST00000369682 CSRNP3Q8WYN3 585 aa15.66■□□□□ 0.1
PLXNA3-201ENST00000369682 FBLN2P98095 1184 aa15.66■□□□□ 0.1
PLXNA3-201ENST00000369682 CHIC2Q9UKJ5 165 aa15.65■□□□□ 0.1
PLXNA3-201ENST00000369682 MRS2Q9HD23 443 aa15.63■□□□□ 0.09
PLXNA3-201ENST00000369682 SUPT16HQ9Y5B9 1047 aaKnown RBP15.6■□□□□ 0.09
PLXNA3-201ENST00000369682 TPRNQ4KMQ1 711 aa15.58■□□□□ 0.08
PLXNA3-201ENST00000369682 KDM2AQ9Y2K7 1162 aa15.55■□□□□ 0.08
PLXNA3-201ENST00000369682 ANP32BQ92688 251 aaKnown RBP15.55■□□□□ 0.08
PLXNA3-201ENST00000369682 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.54■□□□□ 0.08
PLXNA3-201ENST00000369682 GLIPR1L2Q4G1C9 344 aa15.52■□□□□ 0.08
PLXNA3-201ENST00000369682 TMC1Q8TDI8 760 aa15.51■□□□□ 0.07
PLXNA3-201ENST00000369682 ARID4BQ4LE39 1312 aaPredicted RBP15.47■□□□□ 0.07
PLXNA3-201ENST00000369682 UPF2Q9HAU5 1272 aaKnown RBP15.47■□□□□ 0.07
PLXNA3-201ENST00000369682 DEKP35659 375 aaKnown RBP15.47■□□□□ 0.07
PLXNA3-201ENST00000369682 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.46■□□□□ 0.071e-6■■■□□ 16.2
PLXNA3-201ENST00000369682 PLPPR3Q6T4P5 718 aa15.46■□□□□ 0.07
PLXNA3-201ENST00000369682 B4GALNT3Q6L9W6 998 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms