RNA–Protein interactions for RNA: ENST00000548032.6

SEC23A-204, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-204ENST00000548032 NISCHQ9Y2I1 1504 aa35.42■■■■□ 3.26
SEC23A-204ENST00000548032 CCDC180Q9P1Z9 1646 aa31.5■■■□□ 2.63
SEC23A-204ENST00000548032 ABCC9O60706 1549 aa31.27■■■□□ 2.6
SEC23A-204ENST00000548032 DCAF8L2P0C7V8 631 aa29.85■■■□□ 2.37
SEC23A-204ENST00000548032 RB1CC1Q8TDY2 1594 aa29.81■■■□□ 2.36
SEC23A-204ENST00000548032 NACADO15069 1562 aa29.72■■■□□ 2.35
SEC23A-204ENST00000548032 ZCCHC6Q5VYS8 1495 aaKnown RBP29.45■■■□□ 2.31
SEC23A-204ENST00000548032 DNAJC5BQ9UF47 199 aa29.44■■■□□ 2.3
SEC23A-204ENST00000548032 MYO15BQ96JP2 1530 aa29.41■■■□□ 2.3
SEC23A-204ENST00000548032 DCAF1Q9Y4B6 1507 aa29.23■■■□□ 2.27
SEC23A-204ENST00000548032 PABPN1Q86U42 306 aaKnown RBP eCLIP29.16■■■□□ 2.26
SEC23A-204ENST00000548032 UNC13AQ9UPW8 1703 aa29.06■■■□□ 2.24
SEC23A-204ENST00000548032 BICRAQ9NZM4 1560 aa28.91■■■□□ 2.22
SEC23A-204ENST00000548032 SCRIBQ14160 1630 aa28.84■■■□□ 2.21
SEC23A-204ENST00000548032 SHROOM4Q9ULL8 1493 aa28.55■■■□□ 2.16
SEC23A-204ENST00000548032 EIF4G1Q04637 1599 aaKnown RBP28.19■■■□□ 2.1
SEC23A-204ENST00000548032 CC2D2AQ9P2K1 1620 aa28.18■■■□□ 2.1
SEC23A-204ENST00000548032 CECR2Q9BXF3 1484 aa28.17■■■□□ 2.1
SEC23A-204ENST00000548032 SMARCA4P51532 1647 aa27.52■■■□□ 2
SEC23A-204ENST00000548032 BAZ1AQ9NRL2 1556 aaPredicted RBP27.46■■□□□ 1.99
SEC23A-204ENST00000548032 ATAD2BQ9ULI0 1458 aa27.44■■□□□ 1.98
SEC23A-204ENST00000548032 NCAPD3P42695 1498 aa27.44■■□□□ 1.98
SEC23A-204ENST00000548032 SMARCA2P51531 1590 aa27.38■■□□□ 1.97
SEC23A-204ENST00000548032 MROH2BQ7Z745 1585 aa27.32■■□□□ 1.96
SEC23A-204ENST00000548032 HMGXB3Q12766 1538 aa27.26■■□□□ 1.96
SEC23A-204ENST00000548032 BAZ1BQ9UIG0 1483 aaKnown RBP27.23■■□□□ 1.95
SEC23A-204ENST00000548032 PEG3Q9GZU2 1588 aa27.2■■□□□ 1.94
SEC23A-204ENST00000548032 DNAJC5Q9H3Z4 198 aa27.09■■□□□ 1.93
SEC23A-204ENST00000548032 ERCC6Q03468 1493 aa27■■□□□ 1.91
SEC23A-204ENST00000548032 WIZO95785 1651 aa27■■□□□ 1.91
SEC23A-204ENST00000548032 CUX2O14529 1486 aa26.93■■□□□ 1.9
SEC23A-204ENST00000548032 RSF1Q96T23 1441 aaPredicted RBP26.93■■□□□ 1.9
SEC23A-204ENST00000548032 NESP48681 1621 aa26.9■■□□□ 1.9
SEC23A-204ENST00000548032 LAMC3Q9Y6N6 1575 aa26.73■■□□□ 1.87
SEC23A-204ENST00000548032 TOP2AP11388 1531 aaKnown RBP26.7■■□□□ 1.86
SEC23A-204ENST00000548032 CADPSQ9ULU8 1353 aa26.66■■□□□ 1.86
SEC23A-204ENST00000548032 PDS5BQ9NTI5 1447 aa26.61■■□□□ 1.85
SEC23A-204ENST00000548032 KIF21AQ7Z4S6 1674 aa26.5■■□□□ 1.83
SEC23A-204ENST00000548032 THOC2Q8NI27 1593 aaKnown RBP26.49■■□□□ 1.83
SEC23A-204ENST00000548032 CFTRP13569 1480 aa26.43■■□□□ 1.82
SEC23A-204ENST00000548032 CCDC88BA6NC98 1476 aa26.41■■□□□ 1.82
SEC23A-204ENST00000548032 FANCD2Q9BXW9 1451 aa26.36■■□□□ 1.81
SEC23A-204ENST00000548032 MRC2Q9UBG0 1479 aa26.36■■□□□ 1.81
SEC23A-204ENST00000548032 CEP164Q9UPV0 1460 aa26.36■■□□□ 1.81
SEC23A-204ENST00000548032 WDR62O43379 1518 aa26.24■■□□□ 1.79
SEC23A-204ENST00000548032 SUPT5HO00267 1087 aaKnown RBP26.21■■□□□ 1.79
SEC23A-204ENST00000548032 PRDM2Q13029 1718 aa26.11■■□□□ 1.77
SEC23A-204ENST00000548032 URB2Q14146 1524 aaKnown RBP26.1■■□□□ 1.77
SEC23A-204ENST00000548032 TOPBP1Q92547 1522 aa25.9■■□□□ 1.74
SEC23A-204ENST00000548032 TRIM41Q8WV44 630 aa25.89■■□□□ 1.74
SEC23A-204ENST00000548032 ABCC8Q09428 1581 aa25.86■■□□□ 1.73
SEC23A-204ENST00000548032 DNMBPQ6XZF7 1577 aa25.84■■□□□ 1.73
SEC23A-204ENST00000548032 IFT140Q96RY7 1462 aa25.8■■□□□ 1.72
SEC23A-204ENST00000548032 OSCARQ8IYS5 282 aa25.79■■□□□ 1.72
SEC23A-204ENST00000548032 ZNF608Q9ULD9 1512 aaPredicted RBP25.73■■□□□ 1.71
SEC23A-204ENST00000548032 POLA1P09884 1462 aaPredicted RBP25.67■■□□□ 1.7
SEC23A-204ENST00000548032 CUX1P39880 1505 aa25.63■■□□□ 1.69
SEC23A-204ENST00000548032 RAD54L2Q9Y4B4 1467 aa25.6■■□□□ 1.69
SEC23A-204ENST00000548032 SOGA1O94964 1423 aa25.6■■□□□ 1.69
SEC23A-204ENST00000548032 FGD5Q6ZNL6 1462 aa25.6■■□□□ 1.69
SEC23A-204ENST00000548032 TARBP1Q13395 1621 aaKnown RBP25.59■■□□□ 1.69
SEC23A-204ENST00000548032 EIF4G3O43432 1585 aaKnown RBP25.57■■□□□ 1.68
SEC23A-204ENST00000548032 AQRO60306 1485 aaKnown RBP eCLIP25.57■■□□□ 1.682e-7■■■■□ 21.3
SEC23A-204ENST00000548032 TDRD9Q8NDG6 1382 aaKnown RBP25.5■■□□□ 1.67
SEC23A-204ENST00000548032 WRNQ14191 1432 aaPredicted RBP eCLIP25.41■■□□□ 1.66
SEC23A-204ENST00000548032 FBLN2P98095 1184 aa25.38■■□□□ 1.65
SEC23A-204ENST00000548032 WDR97A6NE52 1622 aa25.34■■□□□ 1.65
SEC23A-204ENST00000548032 SYNJ1O43426 1573 aa25.34■■□□□ 1.65
SEC23A-204ENST00000548032 RIMBP3CA6NJZ7 1639 aa25.34■■□□□ 1.65
SEC23A-204ENST00000548032 RIMBP3BA6NNM3 1639 aa25.34■■□□□ 1.65
SEC23A-204ENST00000548032 RIMBP3Q9UFD9 1639 aa25.34■■□□□ 1.65
SEC23A-204ENST00000548032 TOP2BQ02880 1626 aa25.33■■□□□ 1.65
SEC23A-204ENST00000548032 SNAPC4Q5SXM2 1469 aa25.32■■□□□ 1.64
SEC23A-204ENST00000548032 BIVM-ERCC5R4GMW8 1640 aa25.3■■□□□ 1.64
SEC23A-204ENST00000548032 GRIN2BQ13224 1484 aa25.3■■□□□ 1.64
SEC23A-204ENST00000548032 ABCA10Q8WWZ4 1543 aa25.3■■□□□ 1.64
SEC23A-204ENST00000548032 ARHGEF11O15085 1522 aa25.29■■□□□ 1.64
SEC23A-204ENST00000548032 GAPVD1Q14C86 1478 aa25.28■■□□□ 1.64
SEC23A-204ENST00000548032 CHD1O14646 1710 aa25.27■■□□□ 1.64
SEC23A-204ENST00000548032 MAGI1Q96QZ7 1491 aaPredicted RBP25.23■■□□□ 1.63
SEC23A-204ENST00000548032 CHMP7Q8WUX9 453 aaPredicted RBP25.23■■□□□ 1.63
SEC23A-204ENST00000548032 CYB5RLQ6IPT4 315 aa25.21■■□□□ 1.63
SEC23A-204ENST00000548032 ABCA5Q8WWZ7 1642 aa25.2■■□□□ 1.62
SEC23A-204ENST00000548032 PBRM1Q86U86 1689 aa25.18■■□□□ 1.62
SEC23A-204ENST00000548032 SYNJ2O15056 1496 aa25.15■■□□□ 1.62
SEC23A-204ENST00000548032 ARAP1Q96P48 1450 aa25.04■■□□□ 1.6
SEC23A-204ENST00000548032 CLASP1Q7Z460 1538 aa25■■□□□ 1.59
SEC23A-204ENST00000548032 ADAMTS12P58397 1594 aa25■■□□□ 1.59
SEC23A-204ENST00000548032 ERICH3Q5RHP9 1530 aa24.98■■□□□ 1.59
SEC23A-204ENST00000548032 GRIN2AQ12879 1464 aa24.97■■□□□ 1.59
SEC23A-204ENST00000548032 FHAD1B1AJZ9 1412 aa24.97■■□□□ 1.59
SEC23A-204ENST00000548032 TRHP20396 242 aaPredicted RBP24.96■■□□□ 1.59
SEC23A-204ENST00000548032 KIF27Q86VH2 1401 aa24.9■■□□□ 1.58
SEC23A-204ENST00000548032 NUP160Q12769 1436 aa24.85■■□□□ 1.57
SEC23A-204ENST00000548032 CEP170Q5SW79 1584 aa24.84■■□□□ 1.57
SEC23A-204ENST00000548032 IGF1RP08069 1367 aa24.82■■□□□ 1.56
SEC23A-204ENST00000548032 CUL7Q14999 1698 aa24.7■■□□□ 1.54
SEC23A-204ENST00000548032 CARMIL1Q5VZK9 1371 aa24.68■■□□□ 1.54
SEC23A-204ENST00000548032 ERCC6L2Q5T890 1561 aa24.68■■□□□ 1.54
SEC23A-204ENST00000548032 JPH4Q96JJ6 628 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms