Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NANOGP1Q8N7R0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NANOGP1Q8N7R0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NANOGP1Q8N7R0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NANOGP1Q8N7R0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NANOGP1Q8N7R0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NANOGP1Q8N7R0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.28■□□□□ 0.36
NANOGP1Q8N7R0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NANOGP1Q8N7R0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.28■□□□□ 0.36
NANOGP1Q8N7R0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NANOGP1Q8N7R0 AC018553.1-201ENST00000616682 1458 ntBASIC17.28■□□□□ 0.36
NANOGP1Q8N7R0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NANOGP1Q8N7R0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.28■□□□□ 0.36
NANOGP1Q8N7R0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NANOGP1Q8N7R0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NANOGP1Q8N7R0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NANOGP1Q8N7R0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NANOGP1Q8N7R0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.28■□□□□ 0.36
NANOGP1Q8N7R0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
NANOGP1Q8N7R0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NANOGP1Q8N7R0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NANOGP1Q8N7R0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.27■□□□□ 0.36
NANOGP1Q8N7R0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NANOGP1Q8N7R0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.27■□□□□ 0.36
NANOGP1Q8N7R0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.27■□□□□ 0.36
NANOGP1Q8N7R0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NANOGP1Q8N7R0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.27■□□□□ 0.36
NANOGP1Q8N7R0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NANOGP1Q8N7R0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NANOGP1Q8N7R0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.27■□□□□ 0.36
NANOGP1Q8N7R0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
NANOGP1Q8N7R0 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.27■□□□□ 0.36
NANOGP1Q8N7R0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NANOGP1Q8N7R0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NANOGP1Q8N7R0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NANOGP1Q8N7R0 KRT19P1-201ENST00000405746 1186 ntBASIC17.27■□□□□ 0.36
NANOGP1Q8N7R0 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.27■□□□□ 0.36
NANOGP1Q8N7R0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
NANOGP1Q8N7R0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.27■□□□□ 0.35
NANOGP1Q8N7R0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
NANOGP1Q8N7R0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NANOGP1Q8N7R0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.27■□□□□ 0.35
NANOGP1Q8N7R0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
NANOGP1Q8N7R0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.27■□□□□ 0.35
NANOGP1Q8N7R0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 AC010536.3-201ENST00000620306 533 ntBASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 IRX1P1-201ENST00000438849 1838 ntBASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NANOGP1Q8N7R0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NANOGP1Q8N7R0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
NANOGP1Q8N7R0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.25■□□□□ 0.35
NANOGP1Q8N7R0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NANOGP1Q8N7R0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.25■□□□□ 0.35
NANOGP1Q8N7R0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NANOGP1Q8N7R0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NANOGP1Q8N7R0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.25■□□□□ 0.35
NANOGP1Q8N7R0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.25■□□□□ 0.35
NANOGP1Q8N7R0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
NANOGP1Q8N7R0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NANOGP1Q8N7R0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NANOGP1Q8N7R0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
NANOGP1Q8N7R0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NANOGP1Q8N7R0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms