RNA–Protein interactions for RNA: ENST00000216014.8

KDELR3-201, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDELR3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-201ENST00000216014 NISCHQ9Y2I1 1504 aa47.53■■■■■ 5.2
KDELR3-201ENST00000216014 CCDC180Q9P1Z9 1646 aa41.88■■■■■ 4.3
KDELR3-201ENST00000216014 ABCC9O60706 1549 aa40.43■■■■■ 4.06
KDELR3-201ENST00000216014 ZCCHC6Q5VYS8 1495 aaKnown RBP39.75■■■■□ 3.95
KDELR3-201ENST00000216014 DCAF8L2P0C7V8 631 aa39.41■■■■□ 3.9
KDELR3-201ENST00000216014 DCAF1Q9Y4B6 1507 aa39.25■■■■□ 3.87
KDELR3-201ENST00000216014 NACADO15069 1562 aa39.16■■■■□ 3.86
KDELR3-201ENST00000216014 MYO15BQ96JP2 1530 aa39.1■■■■□ 3.85
KDELR3-201ENST00000216014 RB1CC1Q8TDY2 1594 aa39.04■■■■□ 3.84
KDELR3-201ENST00000216014 UNC13AQ9UPW8 1703 aa38.44■■■■□ 3.74
KDELR3-201ENST00000216014 SCRIBQ14160 1630 aa38.43■■■■□ 3.74
KDELR3-201ENST00000216014 SHROOM4Q9ULL8 1493 aa38.12■■■■□ 3.69
KDELR3-201ENST00000216014 BICRAQ9NZM4 1560 aa38.04■■■■□ 3.68
KDELR3-201ENST00000216014 PABPN1Q86U42 306 aaKnown RBP eCLIP37.92■■■■□ 3.66
KDELR3-201ENST00000216014 CECR2Q9BXF3 1484 aa37.07■■■■□ 3.52
KDELR3-201ENST00000216014 EIF4G1Q04637 1599 aaKnown RBP36.89■■■■□ 3.5
KDELR3-201ENST00000216014 SMARCA4P51532 1647 aa36.76■■■■□ 3.48
KDELR3-201ENST00000216014 MROH2BQ7Z745 1585 aa36.74■■■■□ 3.47
KDELR3-201ENST00000216014 BAZ1AQ9NRL2 1556 aaPredicted RBP36.71■■■■□ 3.47
KDELR3-201ENST00000216014 CC2D2AQ9P2K1 1620 aa36.59■■■■□ 3.45
KDELR3-201ENST00000216014 DNAJC5BQ9UF47 199 aa36.57■■■■□ 3.45
KDELR3-201ENST00000216014 RSF1Q96T23 1441 aaPredicted RBP36.52■■■■□ 3.44
KDELR3-201ENST00000216014 WIZO95785 1651 aa36.41■■■■□ 3.42
KDELR3-201ENST00000216014 ATAD2BQ9ULI0 1458 aa36.35■■■■□ 3.41
KDELR3-201ENST00000216014 PEG3Q9GZU2 1588 aa36.33■■■■□ 3.41
KDELR3-201ENST00000216014 SMARCA2P51531 1590 aa36.24■■■■□ 3.39
KDELR3-201ENST00000216014 NCAPD3P42695 1498 aa36.16■■■■□ 3.38
KDELR3-201ENST00000216014 SUPT5HO00267 1087 aaKnown RBP36.14■■■■□ 3.38
KDELR3-201ENST00000216014 HMGXB3Q12766 1538 aa36.05■■■■□ 3.36
KDELR3-201ENST00000216014 BAZ1BQ9UIG0 1483 aaKnown RBP36.04■■■■□ 3.36
KDELR3-201ENST00000216014 TOP2AP11388 1531 aaKnown RBP35.93■■■■□ 3.34
KDELR3-201ENST00000216014 CCDC88BA6NC98 1476 aa35.56■■■■□ 3.28
KDELR3-201ENST00000216014 NESP48681 1621 aa35.27■■■■□ 3.24
KDELR3-201ENST00000216014 CADPSQ9ULU8 1353 aa35.14■■■■□ 3.22
KDELR3-201ENST00000216014 CFTRP13569 1480 aa35.11■■■■□ 3.21
KDELR3-201ENST00000216014 LAMC3Q9Y6N6 1575 aa35.07■■■■□ 3.21
KDELR3-201ENST00000216014 PRDM2Q13029 1718 aa34.96■■■■□ 3.19
KDELR3-201ENST00000216014 KIF21AQ7Z4S6 1674 aa34.86■■■■□ 3.17
KDELR3-201ENST00000216014 FANCD2Q9BXW9 1451 aa34.78■■■■□ 3.16
KDELR3-201ENST00000216014 PDS5BQ9NTI5 1447 aa34.75■■■■□ 3.15
KDELR3-201ENST00000216014 ERCC6Q03468 1493 aa34.65■■■■□ 3.14
KDELR3-201ENST00000216014 CEP164Q9UPV0 1460 aa34.63■■■■□ 3.13
KDELR3-201ENST00000216014 ABCC8Q09428 1581 aa34.58■■■■□ 3.13
KDELR3-201ENST00000216014 THOC2Q8NI27 1593 aaKnown RBP34.51■■■■□ 3.12
KDELR3-201ENST00000216014 URB2Q14146 1524 aaKnown RBP34.48■■■■□ 3.11
KDELR3-201ENST00000216014 MRC2Q9UBG0 1479 aa34.44■■■■□ 3.1
KDELR3-201ENST00000216014 CUX1P39880 1505 aa34.41■■■■□ 3.1
KDELR3-201ENST00000216014 SYNJ1O43426 1573 aa34.37■■■■□ 3.09
KDELR3-201ENST00000216014 WDR62O43379 1518 aa34.34■■■■□ 3.09
KDELR3-201ENST00000216014 WRNQ14191 1432 aaPredicted RBP eCLIP34.34■■■■□ 3.09
KDELR3-201ENST00000216014 TOPBP1Q92547 1522 aa34.33■■■■□ 3.09
KDELR3-201ENST00000216014 DNMBPQ6XZF7 1577 aa34.32■■■■□ 3.08
KDELR3-201ENST00000216014 BIVM-ERCC5R4GMW8 1640 aa34.25■■■■□ 3.07
KDELR3-201ENST00000216014 TOP2BQ02880 1626 aa34.23■■■■□ 3.07
KDELR3-201ENST00000216014 CHIC1Q5VXU3 224 aa34.16■■■■□ 3.06
KDELR3-201ENST00000216014 FGD5Q6ZNL6 1462 aa34.12■■■■□ 3.05
KDELR3-201ENST00000216014 POLA1P09884 1462 aaPredicted RBP34.1■■■■□ 3.05
KDELR3-201ENST00000216014 CUX2O14529 1486 aa34.08■■■■□ 3.05
KDELR3-201ENST00000216014 RAD54L2Q9Y4B4 1467 aa34.01■■■■□ 3.03
KDELR3-201ENST00000216014 TRIM41Q8WV44 630 aa33.99■■■■□ 3.03
KDELR3-201ENST00000216014 TARBP1Q13395 1621 aaKnown RBP33.96■■■■□ 3.03
KDELR3-201ENST00000216014 SOGA1O94964 1423 aa33.91■■■■□ 3.02
KDELR3-201ENST00000216014 WDR97A6NE52 1622 aa33.87■■■■□ 3.01
KDELR3-201ENST00000216014 IFT140Q96RY7 1462 aa33.84■■■■□ 3.01
KDELR3-201ENST00000216014 ZNF608Q9ULD9 1512 aaPredicted RBP33.81■■■■□ 3
KDELR3-201ENST00000216014 ABCA10Q8WWZ4 1543 aa33.77■■■■□ 3
KDELR3-201ENST00000216014 TDRD9Q8NDG6 1382 aaKnown RBP33.71■■■□□ 2.99
KDELR3-201ENST00000216014 RUSC2Q8N2Y8 1516 aa33.69■■■□□ 2.98
KDELR3-201ENST00000216014 AQRO60306 1485 aaKnown RBP eCLIP33.68■■■□□ 2.98
KDELR3-201ENST00000216014 EIF4G3O43432 1585 aaKnown RBP33.67■■■□□ 2.98
KDELR3-201ENST00000216014 ABCA5Q8WWZ7 1642 aa33.65■■■□□ 2.98
KDELR3-201ENST00000216014 GAPVD1Q14C86 1478 aa33.54■■■□□ 2.96
KDELR3-201ENST00000216014 PBRM1Q86U86 1689 aa33.52■■■□□ 2.96
KDELR3-201ENST00000216014 KIF27Q86VH2 1401 aa33.5■■■□□ 2.95
KDELR3-201ENST00000216014 FAM9AQ8IZU1 332 aaPredicted RBP33.42■■■□□ 2.94
KDELR3-201ENST00000216014 GRIN2BQ13224 1484 aa33.4■■■□□ 2.94
KDELR3-201ENST00000216014 IGF1RP08069 1367 aa33.38■■■□□ 2.93
KDELR3-201ENST00000216014 ERICH3Q5RHP9 1530 aa33.35■■■□□ 2.93
KDELR3-201ENST00000216014 SNAPC4Q5SXM2 1469 aa33.34■■■□□ 2.93
KDELR3-201ENST00000216014 ADAMTS12P58397 1594 aa33.26■■■□□ 2.92
KDELR3-201ENST00000216014 EEA1Q15075 1411 aa33.26■■■□□ 2.91
KDELR3-201ENST00000216014 MAGI1Q96QZ7 1491 aaPredicted RBP33.22■■■□□ 2.91
KDELR3-201ENST00000216014 CSRNP3Q8WYN3 585 aa33.22■■■□□ 2.91
KDELR3-201ENST00000216014 CUL7Q14999 1698 aa33.19■■■□□ 2.9
KDELR3-201ENST00000216014 CHD1O14646 1710 aa33.16■■■□□ 2.9
KDELR3-201ENST00000216014 CARMIL1Q5VZK9 1371 aa33.14■■■□□ 2.9
KDELR3-201ENST00000216014 PRXQ9BXM0 1461 aa33.13■■■□□ 2.89
KDELR3-201ENST00000216014 FHAD1B1AJZ9 1412 aa33.13■■■□□ 2.89
KDELR3-201ENST00000216014 SYNJ2O15056 1496 aa33.11■■■□□ 2.89
KDELR3-201ENST00000216014 RAPGEF2Q9Y4G8 1499 aa33.04■■■□□ 2.88
KDELR3-201ENST00000216014 FBLN2P98095 1184 aa33.03■■■□□ 2.88
KDELR3-201ENST00000216014 GRIN2AQ12879 1464 aa33.03■■■□□ 2.88
KDELR3-201ENST00000216014 EHMT2Q96KQ7 1210 aa33.02■■■□□ 2.88
KDELR3-201ENST00000216014 KIF21BO75037 1637 aa33.02■■■□□ 2.88
KDELR3-201ENST00000216014 CHMP7Q8WUX9 453 aaPredicted RBP32.99■■■□□ 2.87
KDELR3-201ENST00000216014 CEP170Q5SW79 1584 aa32.93■■■□□ 2.86
KDELR3-201ENST00000216014 LOC105371045A0A1W2PR82 267 aa32.85■■■□□ 2.85
KDELR3-201ENST00000216014 NUP160Q12769 1436 aa32.84■■■□□ 2.85
KDELR3-201ENST00000216014 GOLGA3Q08378 1498 aa32.83■■■□□ 2.85
KDELR3-201ENST00000216014 CTTNBP2Q8WZ74 1663 aa32.76■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms