RNA–Protein interactions for RNA: ENST00000512788.1

UCHL1-210, Transcript of ubiquitin C-terminal hydrolase L1, humanhuman

TSL 3 BASIC

Gene UCHL1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL1-210ENST00000512788 NISCHQ9Y2I1 1504 aa51.65■■■■■ 5.86
UCHL1-210ENST00000512788 CCDC180Q9P1Z9 1646 aa45.93■■■■■ 4.94
UCHL1-210ENST00000512788 ABCC9O60706 1549 aa45.5■■■■■ 4.87
UCHL1-210ENST00000512788 DCAF8L2P0C7V8 631 aa43.74■■■■■ 4.59
UCHL1-210ENST00000512788 RB1CC1Q8TDY2 1594 aa43.54■■■■■ 4.56
UCHL1-210ENST00000512788 NACADO15069 1562 aa43.39■■■■■ 4.54
UCHL1-210ENST00000512788 MYO15BQ96JP2 1530 aa42.95■■■■■ 4.47
UCHL1-210ENST00000512788 ZCCHC6Q5VYS8 1495 aaKnown RBP42.89■■■■■ 4.46
UCHL1-210ENST00000512788 DCAF1Q9Y4B6 1507 aa42.64■■■■■ 4.42
UCHL1-210ENST00000512788 PABPN1Q86U42 306 aaKnown RBP eCLIP42.6■■■■■ 4.41
UCHL1-210ENST00000512788 UNC13AQ9UPW8 1703 aa42.33■■■■■ 4.37
UCHL1-210ENST00000512788 BICRAQ9NZM4 1560 aa42.1■■■■■ 4.33
UCHL1-210ENST00000512788 DNAJC5BQ9UF47 199 aa42.07■■■■■ 4.33
UCHL1-210ENST00000512788 SCRIBQ14160 1630 aa42.02■■■■■ 4.32
UCHL1-210ENST00000512788 SHROOM4Q9ULL8 1493 aa41.67■■■■■ 4.26
UCHL1-210ENST00000512788 EIF4G1Q04637 1599 aaKnown RBP41.1■■■■■ 4.17
UCHL1-210ENST00000512788 CC2D2AQ9P2K1 1620 aa41.03■■■■■ 4.16
UCHL1-210ENST00000512788 CECR2Q9BXF3 1484 aa40.91■■■■■ 4.14
UCHL1-210ENST00000512788 SMARCA4P51532 1647 aa40.09■■■■■ 4.01
UCHL1-210ENST00000512788 NCAPD3P42695 1498 aa40.07■■■■■ 4.01
UCHL1-210ENST00000512788 BAZ1AQ9NRL2 1556 aaPredicted RBP40.07■■■■■ 4.01
UCHL1-210ENST00000512788 ATAD2BQ9ULI0 1458 aa40.04■■■■■ 4
UCHL1-210ENST00000512788 SMARCA2P51531 1590 aa39.97■■■■□ 3.99
UCHL1-210ENST00000512788 MROH2BQ7Z745 1585 aa39.8■■■■□ 3.96
UCHL1-210ENST00000512788 HMGXB3Q12766 1538 aa39.75■■■■□ 3.95
UCHL1-210ENST00000512788 BAZ1BQ9UIG0 1483 aaKnown RBP39.75■■■■□ 3.95
UCHL1-210ENST00000512788 PEG3Q9GZU2 1588 aa39.65■■■■□ 3.94
UCHL1-210ENST00000512788 WIZO95785 1651 aa39.32■■■■□ 3.89
UCHL1-210ENST00000512788 ERCC6Q03468 1493 aa39.32■■■■□ 3.89
UCHL1-210ENST00000512788 RSF1Q96T23 1441 aaPredicted RBP39.28■■■■□ 3.88
UCHL1-210ENST00000512788 NESP48681 1621 aa39.21■■■■□ 3.87
UCHL1-210ENST00000512788 LAMC3Q9Y6N6 1575 aa39.03■■■■□ 3.84
UCHL1-210ENST00000512788 CADPSQ9ULU8 1353 aa38.97■■■■□ 3.83
UCHL1-210ENST00000512788 PDS5BQ9NTI5 1447 aa38.93■■■■□ 3.82
UCHL1-210ENST00000512788 TOP2AP11388 1531 aaKnown RBP38.89■■■■□ 3.82
UCHL1-210ENST00000512788 CUX2O14529 1486 aa38.88■■■■□ 3.81
UCHL1-210ENST00000512788 KIF21AQ7Z4S6 1674 aa38.62■■■■□ 3.77
UCHL1-210ENST00000512788 CFTRP13569 1480 aa38.58■■■■□ 3.77
UCHL1-210ENST00000512788 THOC2Q8NI27 1593 aaKnown RBP38.54■■■■□ 3.76
UCHL1-210ENST00000512788 CCDC88BA6NC98 1476 aa38.53■■■■□ 3.76
UCHL1-210ENST00000512788 FANCD2Q9BXW9 1451 aa38.48■■■■□ 3.75
UCHL1-210ENST00000512788 CEP164Q9UPV0 1460 aa38.47■■■■□ 3.75
UCHL1-210ENST00000512788 MRC2Q9UBG0 1479 aa38.46■■■■□ 3.75
UCHL1-210ENST00000512788 SUPT5HO00267 1087 aaKnown RBP38.33■■■■□ 3.73
UCHL1-210ENST00000512788 WDR62O43379 1518 aa38.25■■■■□ 3.71
UCHL1-210ENST00000512788 DNAJC5Q9H3Z4 198 aa38.22■■■■□ 3.71
UCHL1-210ENST00000512788 PRDM2Q13029 1718 aa38.06■■■■□ 3.68
UCHL1-210ENST00000512788 URB2Q14146 1524 aaKnown RBP38.04■■■■□ 3.68
UCHL1-210ENST00000512788 ABCC8Q09428 1581 aa37.85■■■■□ 3.65
UCHL1-210ENST00000512788 TOPBP1Q92547 1522 aa37.78■■■■□ 3.64
UCHL1-210ENST00000512788 IFT140Q96RY7 1462 aa37.68■■■■□ 3.62
UCHL1-210ENST00000512788 DNMBPQ6XZF7 1577 aa37.68■■■■□ 3.62
UCHL1-210ENST00000512788 ZNF608Q9ULD9 1512 aaPredicted RBP37.5■■■■□ 3.59
UCHL1-210ENST00000512788 OSCARQ8IYS5 282 aa37.45■■■■□ 3.59
UCHL1-210ENST00000512788 POLA1P09884 1462 aaPredicted RBP37.44■■■■□ 3.58
UCHL1-210ENST00000512788 SOGA1O94964 1423 aa37.42■■■■□ 3.58
UCHL1-210ENST00000512788 CUX1P39880 1505 aa37.35■■■■□ 3.57
UCHL1-210ENST00000512788 RAD54L2Q9Y4B4 1467 aa37.34■■■■□ 3.57
UCHL1-210ENST00000512788 AQRO60306 1485 aaKnown RBP eCLIP37.33■■■■□ 3.57
UCHL1-210ENST00000512788 FGD5Q6ZNL6 1462 aa37.33■■■■□ 3.57
UCHL1-210ENST00000512788 TARBP1Q13395 1621 aaKnown RBP37.3■■■■□ 3.56
UCHL1-210ENST00000512788 TDRD9Q8NDG6 1382 aaKnown RBP37.25■■■■□ 3.55
UCHL1-210ENST00000512788 EIF4G3O43432 1585 aaKnown RBP37.25■■■■□ 3.55
UCHL1-210ENST00000512788 FBLN2P98095 1184 aa37.18■■■■□ 3.54
UCHL1-210ENST00000512788 WRNQ14191 1432 aaPredicted RBP eCLIP37.1■■■■□ 3.53
UCHL1-210ENST00000512788 WDR97A6NE52 1622 aa36.99■■■■□ 3.51
UCHL1-210ENST00000512788 CHMP7Q8WUX9 453 aaPredicted RBP36.97■■■■□ 3.51
UCHL1-210ENST00000512788 TRIM41Q8WV44 630 aa36.97■■■■□ 3.51
UCHL1-210ENST00000512788 GRIN2BQ13224 1484 aa36.95■■■■□ 3.51
UCHL1-210ENST00000512788 ABCA10Q8WWZ4 1543 aa36.92■■■■□ 3.5
UCHL1-210ENST00000512788 GAPVD1Q14C86 1478 aa36.92■■■■□ 3.5
UCHL1-210ENST00000512788 SNAPC4Q5SXM2 1469 aa36.92■■■■□ 3.5
UCHL1-210ENST00000512788 TOP2BQ02880 1626 aa36.92■■■■□ 3.5
UCHL1-210ENST00000512788 SYNJ1O43426 1573 aa36.88■■■■□ 3.49
UCHL1-210ENST00000512788 BIVM-ERCC5R4GMW8 1640 aa36.85■■■■□ 3.49
UCHL1-210ENST00000512788 MAGI1Q96QZ7 1491 aaPredicted RBP36.85■■■■□ 3.49
UCHL1-210ENST00000512788 CHD1O14646 1710 aa36.82■■■■□ 3.48
UCHL1-210ENST00000512788 SYNJ2O15056 1496 aa36.72■■■■□ 3.47
UCHL1-210ENST00000512788 ABCA5Q8WWZ7 1642 aa36.7■■■■□ 3.47
UCHL1-210ENST00000512788 PBRM1Q86U86 1689 aa36.67■■■■□ 3.46
UCHL1-210ENST00000512788 ARHGEF11O15085 1522 aa36.6■■■■□ 3.45
UCHL1-210ENST00000512788 RIMBP3CA6NJZ7 1639 aa36.6■■■■□ 3.45
UCHL1-210ENST00000512788 RIMBP3BA6NNM3 1639 aa36.6■■■■□ 3.45
UCHL1-210ENST00000512788 RIMBP3Q9UFD9 1639 aa36.6■■■■□ 3.45
UCHL1-210ENST00000512788 CYB5RLQ6IPT4 315 aa36.54■■■■□ 3.44
UCHL1-210ENST00000512788 FHAD1B1AJZ9 1412 aa36.49■■■■□ 3.43
UCHL1-210ENST00000512788 ERICH3Q5RHP9 1530 aa36.47■■■■□ 3.43
UCHL1-210ENST00000512788 GRIN2AQ12879 1464 aa36.43■■■■□ 3.42
UCHL1-210ENST00000512788 CLASP1Q7Z460 1538 aa36.42■■■■□ 3.42
UCHL1-210ENST00000512788 ADAMTS12P58397 1594 aa36.4■■■■□ 3.42
UCHL1-210ENST00000512788 KIF27Q86VH2 1401 aa36.4■■■■□ 3.42
UCHL1-210ENST00000512788 ARAP1Q96P48 1450 aa36.26■■■■□ 3.4
UCHL1-210ENST00000512788 IGF1RP08069 1367 aa36.26■■■■□ 3.39
UCHL1-210ENST00000512788 NUP160Q12769 1436 aa36.25■■■■□ 3.39
UCHL1-210ENST00000512788 CEP170Q5SW79 1584 aa36.19■■■■□ 3.38
UCHL1-210ENST00000512788 JPH4Q96JJ6 628 aa36.09■■■■□ 3.37
UCHL1-210ENST00000512788 CARMIL1Q5VZK9 1371 aa36.08■■■■□ 3.37
UCHL1-210ENST00000512788 CUL7Q14999 1698 aa36.03■■■■□ 3.36
UCHL1-210ENST00000512788 TRHP20396 242 aaPredicted RBP36.01■■■■□ 3.36
UCHL1-210ENST00000512788 PRG4Q92954 1404 aaPredicted RBP35.98■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms