RNA–Protein interactions for RNA: ENST00000308964.7

CCDC106-201, Transcript of coiled-coil domain containing 106, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC106, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC106-201ENST00000308964 NISCHQ9Y2I1 1504 aa44.89■■■■■ 4.78
CCDC106-201ENST00000308964 CCDC180Q9P1Z9 1646 aa39.75■■■■□ 3.95
CCDC106-201ENST00000308964 ABCC9O60706 1549 aa39.07■■■■□ 3.85
CCDC106-201ENST00000308964 DCAF8L2P0C7V8 631 aa37.68■■■■□ 3.62
CCDC106-201ENST00000308964 RB1CC1Q8TDY2 1594 aa37.44■■■■□ 3.58
CCDC106-201ENST00000308964 NACADO15069 1562 aa37.41■■■■□ 3.58
CCDC106-201ENST00000308964 ZCCHC6Q5VYS8 1495 aaKnown RBP37.38■■■■□ 3.57
CCDC106-201ENST00000308964 MYO15BQ96JP2 1530 aa37.17■■■■□ 3.54
CCDC106-201ENST00000308964 DCAF1Q9Y4B6 1507 aa37.05■■■■□ 3.52
CCDC106-201ENST00000308964 UNC13AQ9UPW8 1703 aa36.65■■■■□ 3.46
CCDC106-201ENST00000308964 PABPN1Q86U42 306 aaKnown RBP eCLIP36.58■■■■□ 3.45
CCDC106-201ENST00000308964 SCRIBQ14160 1630 aa36.42■■■■□ 3.42
CCDC106-201ENST00000308964 BICRAQ9NZM4 1560 aa36.38■■■■□ 3.41
CCDC106-201ENST00000308964 DNAJC5BQ9UF47 199 aa36.15■■■■□ 3.38
CCDC106-201ENST00000308964 SHROOM4Q9ULL8 1493 aa35.82■■■■□ 3.33
CCDC106-201ENST00000308964 EIF4G1Q04637 1599 aaKnown RBP35.39■■■■□ 3.26
CCDC106-201ENST00000308964 CC2D2AQ9P2K1 1620 aa35.27■■■■□ 3.24
CCDC106-201ENST00000308964 CECR2Q9BXF3 1484 aa35.12■■■■□ 3.21
CCDC106-201ENST00000308964 SMARCA4P51532 1647 aa34.79■■■■□ 3.16
CCDC106-201ENST00000308964 BAZ1AQ9NRL2 1556 aaPredicted RBP34.74■■■■□ 3.15
CCDC106-201ENST00000308964 MROH2BQ7Z745 1585 aa34.65■■■■□ 3.14
CCDC106-201ENST00000308964 ATAD2BQ9ULI0 1458 aa34.63■■■■□ 3.13
CCDC106-201ENST00000308964 NCAPD3P42695 1498 aa34.57■■■■□ 3.13
CCDC106-201ENST00000308964 SMARCA2P51531 1590 aa34.52■■■■□ 3.12
CCDC106-201ENST00000308964 PEG3Q9GZU2 1588 aa34.41■■■■□ 3.1
CCDC106-201ENST00000308964 HMGXB3Q12766 1538 aa34.34■■■■□ 3.09
CCDC106-201ENST00000308964 BAZ1BQ9UIG0 1483 aaKnown RBP34.32■■■■□ 3.08
CCDC106-201ENST00000308964 RSF1Q96T23 1441 aaPredicted RBP34.28■■■■□ 3.08
CCDC106-201ENST00000308964 WIZO95785 1651 aa34.28■■■■□ 3.08
CCDC106-201ENST00000308964 TOP2AP11388 1531 aaKnown RBP33.83■■■■□ 3.01
CCDC106-201ENST00000308964 NESP48681 1621 aa33.82■■■■□ 3
CCDC106-201ENST00000308964 ERCC6Q03468 1493 aa33.71■■■□□ 2.99
CCDC106-201ENST00000308964 CADPSQ9ULU8 1353 aa33.61■■■□□ 2.97
CCDC106-201ENST00000308964 SUPT5HO00267 1087 aaKnown RBP33.6■■■□□ 2.97
CCDC106-201ENST00000308964 LAMC3Q9Y6N6 1575 aa33.6■■■□□ 2.97
CCDC106-201ENST00000308964 CCDC88BA6NC98 1476 aa33.53■■■□□ 2.96
CCDC106-201ENST00000308964 PDS5BQ9NTI5 1447 aa33.42■■■□□ 2.94
CCDC106-201ENST00000308964 CFTRP13569 1480 aa33.4■■■□□ 2.94
CCDC106-201ENST00000308964 CUX2O14529 1486 aa33.35■■■□□ 2.93
CCDC106-201ENST00000308964 KIF21AQ7Z4S6 1674 aa33.34■■■□□ 2.93
CCDC106-201ENST00000308964 FANCD2Q9BXW9 1451 aa33.21■■■□□ 2.91
CCDC106-201ENST00000308964 THOC2Q8NI27 1593 aaKnown RBP33.17■■■□□ 2.9
CCDC106-201ENST00000308964 CEP164Q9UPV0 1460 aa33.11■■■□□ 2.89
CCDC106-201ENST00000308964 MRC2Q9UBG0 1479 aa33.06■■■□□ 2.88
CCDC106-201ENST00000308964 PRDM2Q13029 1718 aa33.05■■■□□ 2.88
CCDC106-201ENST00000308964 WDR62O43379 1518 aa32.93■■■□□ 2.86
CCDC106-201ENST00000308964 URB2Q14146 1524 aaKnown RBP32.89■■■□□ 2.86
CCDC106-201ENST00000308964 DNAJC5Q9H3Z4 198 aa32.77■■■□□ 2.84
CCDC106-201ENST00000308964 TOPBP1Q92547 1522 aa32.69■■■□□ 2.82
CCDC106-201ENST00000308964 ABCC8Q09428 1581 aa32.61■■■□□ 2.81
CCDC106-201ENST00000308964 DNMBPQ6XZF7 1577 aa32.6■■■□□ 2.81
CCDC106-201ENST00000308964 CUX1P39880 1505 aa32.48■■■□□ 2.79
CCDC106-201ENST00000308964 IFT140Q96RY7 1462 aa32.42■■■□□ 2.78
CCDC106-201ENST00000308964 POLA1P09884 1462 aaPredicted RBP32.41■■■□□ 2.78
CCDC106-201ENST00000308964 ZNF608Q9ULD9 1512 aaPredicted RBP32.36■■■□□ 2.77
CCDC106-201ENST00000308964 FGD5Q6ZNL6 1462 aa32.35■■■□□ 2.77
CCDC106-201ENST00000308964 RAD54L2Q9Y4B4 1467 aa32.34■■■□□ 2.77
CCDC106-201ENST00000308964 SOGA1O94964 1423 aa32.32■■■□□ 2.76
CCDC106-201ENST00000308964 TARBP1Q13395 1621 aaKnown RBP32.3■■■□□ 2.76
CCDC106-201ENST00000308964 WRNQ14191 1432 aaPredicted RBP eCLIP32.29■■■□□ 2.76
CCDC106-201ENST00000308964 AQRO60306 1485 aaKnown RBP eCLIP32.21■■■□□ 2.75
CCDC106-201ENST00000308964 SYNJ1O43426 1573 aa32.21■■■□□ 2.75
CCDC106-201ENST00000308964 TDRD9Q8NDG6 1382 aaKnown RBP32.18■■■□□ 2.74
CCDC106-201ENST00000308964 TOP2BQ02880 1626 aa32.17■■■□□ 2.74
CCDC106-201ENST00000308964 EIF4G3O43432 1585 aaKnown RBP32.14■■■□□ 2.74
CCDC106-201ENST00000308964 BIVM-ERCC5R4GMW8 1640 aa32.14■■■□□ 2.74
CCDC106-201ENST00000308964 CHIC1Q5VXU3 224 aa32.05■■■□□ 2.72
CCDC106-201ENST00000308964 OSCARQ8IYS5 282 aa32.05■■■□□ 2.72
CCDC106-201ENST00000308964 ABCA10Q8WWZ4 1543 aa32.01■■■□□ 2.72
CCDC106-201ENST00000308964 WDR97A6NE52 1622 aa32■■■□□ 2.71
CCDC106-201ENST00000308964 GAPVD1Q14C86 1478 aa31.91■■■□□ 2.7
CCDC106-201ENST00000308964 GRIN2BQ13224 1484 aa31.87■■■□□ 2.69
CCDC106-201ENST00000308964 FBLN2P98095 1184 aa31.86■■■□□ 2.69
CCDC106-201ENST00000308964 ABCA5Q8WWZ7 1642 aa31.85■■■□□ 2.69
CCDC106-201ENST00000308964 SNAPC4Q5SXM2 1469 aa31.84■■■□□ 2.69
CCDC106-201ENST00000308964 PBRM1Q86U86 1689 aa31.78■■■□□ 2.68
CCDC106-201ENST00000308964 MAGI1Q96QZ7 1491 aaPredicted RBP31.75■■■□□ 2.67
CCDC106-201ENST00000308964 CHD1O14646 1710 aa31.74■■■□□ 2.67
CCDC106-201ENST00000308964 CHMP7Q8WUX9 453 aaPredicted RBP31.74■■■□□ 2.67
CCDC106-201ENST00000308964 TRIM41Q8WV44 630 aa31.69■■■□□ 2.66
CCDC106-201ENST00000308964 SYNJ2O15056 1496 aa31.65■■■□□ 2.66
CCDC106-201ENST00000308964 ERICH3Q5RHP9 1530 aa31.6■■■□□ 2.65
CCDC106-201ENST00000308964 KIF27Q86VH2 1401 aa31.59■■■□□ 2.65
CCDC106-201ENST00000308964 IGF1RP08069 1367 aa31.54■■■□□ 2.64
CCDC106-201ENST00000308964 ADAMTS12P58397 1594 aa31.53■■■□□ 2.64
CCDC106-201ENST00000308964 FHAD1B1AJZ9 1412 aa31.53■■■□□ 2.64
CCDC106-201ENST00000308964 RIMBP3CA6NJZ7 1639 aa31.47■■■□□ 2.63
CCDC106-201ENST00000308964 RIMBP3BA6NNM3 1639 aa31.47■■■□□ 2.63
CCDC106-201ENST00000308964 RIMBP3Q9UFD9 1639 aa31.47■■■□□ 2.63
CCDC106-201ENST00000308964 GRIN2AQ12879 1464 aa31.46■■■□□ 2.63
CCDC106-201ENST00000308964 RUSC2Q8N2Y8 1516 aa31.46■■■□□ 2.63
CCDC106-201ENST00000308964 ARHGEF11O15085 1522 aa31.45■■■□□ 2.62
CCDC106-201ENST00000308964 CLASP1Q7Z460 1538 aa31.39■■■□□ 2.61
CCDC106-201ENST00000308964 CARMIL1Q5VZK9 1371 aa31.33■■■□□ 2.61
CCDC106-201ENST00000308964 CEP170Q5SW79 1584 aa31.32■■■□□ 2.6
CCDC106-201ENST00000308964 NUP160Q12769 1436 aa31.32■■■□□ 2.6
CCDC106-201ENST00000308964 CYB5RLQ6IPT4 315 aa31.31■■■□□ 2.6
CCDC106-201ENST00000308964 CUL7Q14999 1698 aa31.29■■■□□ 2.6
CCDC106-201ENST00000308964 ARAP1Q96P48 1450 aa31.17■■■□□ 2.58
CCDC106-201ENST00000308964 JPH4Q96JJ6 628 aa31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms