RNA–Protein interactions for RNA: ENST00000413138.7

KCNC4-203, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNC4, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-203ENST00000413138 NISCHQ9Y2I1 1504 aa37.72■■■■□ 3.63
KCNC4-203ENST00000413138 SHROOM4Q9ULL8 1493 aa32.89■■■□□ 2.86
KCNC4-203ENST00000413138 DCAF8L2P0C7V8 631 aa32.33■■■□□ 2.77
KCNC4-203ENST00000413138 SUPT5HO00267 1087 aaKnown RBP32.23■■■□□ 2.75
KCNC4-203ENST00000413138 ZCCHC6Q5VYS8 1495 aaKnown RBP31.8■■■□□ 2.68
KCNC4-203ENST00000413138 CCDC180Q9P1Z9 1646 aa31.73■■■□□ 2.67
KCNC4-203ENST00000413138 CHIC1Q5VXU3 224 aa30.91■■■□□ 2.54
KCNC4-203ENST00000413138 MYO15BQ96JP2 1530 aa30.7■■■□□ 2.51
KCNC4-203ENST00000413138 DCAF1Q9Y4B6 1507 aa30.57■■■□□ 2.48
KCNC4-203ENST00000413138 HRCP23327 699 aa30.55■■■□□ 2.48
KCNC4-203ENST00000413138 SCRIBQ14160 1630 aa30.33■■■□□ 2.45
KCNC4-203ENST00000413138 ABCC9O60706 1549 aa30.31■■■□□ 2.44
KCNC4-203ENST00000413138 LOC105371045A0A1W2PR82 267 aa30.31■■■□□ 2.44
KCNC4-203ENST00000413138 PPARGC1BQ86YN6 1023 aaKnown RBP30.21■■■□□ 2.43
KCNC4-203ENST00000413138 PCGF6Q9BYE7 350 aa30.17■■■□□ 2.42
KCNC4-203ENST00000413138 EHMT2Q96KQ7 1210 aa29.97■■■□□ 2.39
KCNC4-203ENST00000413138 RSF1Q96T23 1441 aaPredicted RBP29.97■■■□□ 2.39
KCNC4-203ENST00000413138 FAM9AQ8IZU1 332 aaPredicted RBP29.92■■■□□ 2.38
KCNC4-203ENST00000413138 TRIM41Q8WV44 630 aa29.8■■■□□ 2.36
KCNC4-203ENST00000413138 CECR2Q9BXF3 1484 aa29.73■■■□□ 2.35
KCNC4-203ENST00000413138 RB1CC1Q8TDY2 1594 aa29.64■■■□□ 2.34
KCNC4-203ENST00000413138 NACADO15069 1562 aa29.56■■■□□ 2.32
KCNC4-203ENST00000413138 MROH2BQ7Z745 1585 aa29.49■■■□□ 2.31
KCNC4-203ENST00000413138 WIZO95785 1651 aa29.31■■■□□ 2.28
KCNC4-203ENST00000413138 PELP1Q8IZL8 1130 aaKnown RBP29.26■■■□□ 2.27
KCNC4-203ENST00000413138 TRIM26Q12899 539 aaPredicted RBP29.24■■■□□ 2.27
KCNC4-203ENST00000413138 PABPN1Q86U42 306 aaKnown RBP eCLIP29.24■■■□□ 2.27
KCNC4-203ENST00000413138 SCAF1Q9H7N4 1312 aaKnown RBP29.01■■■□□ 2.23
KCNC4-203ENST00000413138 BAZ1AQ9NRL2 1556 aaPredicted RBP28.93■■■□□ 2.22
KCNC4-203ENST00000413138 TTBK1Q5TCY1 1321 aaPredicted RBP28.9■■■□□ 2.22
KCNC4-203ENST00000413138 ABCC8Q09428 1581 aa28.77■■■□□ 2.2
KCNC4-203ENST00000413138 CCDC88BA6NC98 1476 aa28.75■■■□□ 2.19
KCNC4-203ENST00000413138 SMARCA4P51532 1647 aa28.71■■■□□ 2.19
KCNC4-203ENST00000413138 UNC13AQ9UPW8 1703 aa28.69■■■□□ 2.18
KCNC4-203ENST00000413138 TOP2AP11388 1531 aaKnown RBP28.63■■■□□ 2.17
KCNC4-203ENST00000413138 ZEB1P37275 1124 aaPredicted RBP28.59■■■□□ 2.17
KCNC4-203ENST00000413138 SMARCA2P51531 1590 aa28.54■■■□□ 2.16
KCNC4-203ENST00000413138 SOGA1O94964 1423 aa28.53■■■□□ 2.16
KCNC4-203ENST00000413138 UBTFP17480 764 aaKnown RBP28.53■■■□□ 2.16
KCNC4-203ENST00000413138 EIF4G1Q04637 1599 aaKnown RBP28.49■■■□□ 2.15
KCNC4-203ENST00000413138 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.45■■■□□ 2.15
KCNC4-203ENST00000413138 BICRAQ9NZM4 1560 aa28.44■■■□□ 2.14
KCNC4-203ENST00000413138 RUSC2Q8N2Y8 1516 aa28.42■■■□□ 2.14
KCNC4-203ENST00000413138 RANGAP1P46060 587 aaPredicted RBP28.4■■■□□ 2.14
KCNC4-203ENST00000413138 CSRNP3Q8WYN3 585 aa28.37■■■□□ 2.13
KCNC4-203ENST00000413138 CCER1Q8TC90 406 aaPredicted RBP28.29■■■□□ 2.12
KCNC4-203ENST00000413138 NEUROD1Q13562 356 aa28.26■■■□□ 2.11
KCNC4-203ENST00000413138 CEP162Q5TB80 1403 aa28.24■■■□□ 2.11
KCNC4-203ENST00000413138 ACIN1Q9UKV3 1341 aaKnown RBP28.22■■■□□ 2.11
KCNC4-203ENST00000413138 WRNQ14191 1432 aaPredicted RBP eCLIP28.19■■■□□ 2.1
KCNC4-203ENST00000413138 ATAD2BQ9ULI0 1458 aa28.13■■■□□ 2.09
KCNC4-203ENST00000413138 GTF3C3Q9Y5Q9 886 aa28.12■■■□□ 2.09
KCNC4-203ENST00000413138 BAZ1BQ9UIG0 1483 aaKnown RBP28.11■■■□□ 2.09
KCNC4-203ENST00000413138 TNIKQ9UKE5 1360 aa28.07■■■□□ 2.08
KCNC4-203ENST00000413138 MYT1Q01538 1121 aa28.01■■■□□ 2.07
KCNC4-203ENST00000413138 SYNJ1O43426 1573 aa27.98■■■□□ 2.07
KCNC4-203ENST00000413138 GOLGA3Q08378 1498 aa27.93■■■□□ 2.06
KCNC4-203ENST00000413138 EEA1Q15075 1411 aa27.93■■■□□ 2.06
KCNC4-203ENST00000413138 HNRNPUL2Q1KMD3 747 aaKnown RBP27.92■■■□□ 2.06
KCNC4-203ENST00000413138 PEG3Q9GZU2 1588 aa27.91■■■□□ 2.06
KCNC4-203ENST00000413138 CENPBP07199 599 aaPredicted RBP27.85■■■□□ 2.05
KCNC4-203ENST00000413138 DIEXFQ68CQ4 756 aaKnown RBP27.82■■■□□ 2.04
KCNC4-203ENST00000413138 APLP2Q06481 763 aa27.77■■■□□ 2.04
KCNC4-203ENST00000413138 CLIP1P30622 1438 aa27.77■■■□□ 2.04
KCNC4-203ENST00000413138 RAPGEF2Q9Y4G8 1499 aa27.76■■■□□ 2.03
KCNC4-203ENST00000413138 CEP164Q9UPV0 1460 aa27.76■■■□□ 2.03
KCNC4-203ENST00000413138 YTHDC1Q96MU7 727 aaKnown RBP27.62■■■□□ 2.01
KCNC4-203ENST00000413138 KIF21BO75037 1637 aa27.51■■□□□ 1.99
KCNC4-203ENST00000413138 VPS8Q8N3P4 1428 aa27.49■■□□□ 1.99
KCNC4-203ENST00000413138 NCAPD3P42695 1498 aa27.48■■□□□ 1.99
KCNC4-203ENST00000413138 TOP2BQ02880 1626 aa27.47■■□□□ 1.99
KCNC4-203ENST00000413138 CUX1P39880 1505 aa27.4■■□□□ 1.98
KCNC4-203ENST00000413138 KANK4Q5T7N3 995 aaPredicted RBP27.4■■□□□ 1.98
KCNC4-203ENST00000413138 ITGAEP38570 1179 aa27.37■■□□□ 1.97
KCNC4-203ENST00000413138 HMGXB3Q12766 1538 aa27.31■■□□□ 1.96
KCNC4-203ENST00000413138 KIF27Q86VH2 1401 aa27.31■■□□□ 1.96
KCNC4-203ENST00000413138 CFTRP13569 1480 aa27.28■■□□□ 1.96
KCNC4-203ENST00000413138 ZNF316A6NFI3 1004 aaPredicted RBP27.27■■□□□ 1.96
KCNC4-203ENST00000413138 PRXQ9BXM0 1461 aa27.27■■□□□ 1.96
KCNC4-203ENST00000413138 P3H3Q8IVL6 736 aa27.25■■□□□ 1.95
KCNC4-203ENST00000413138 BIVM-ERCC5R4GMW8 1640 aa27.25■■□□□ 1.95
KCNC4-203ENST00000413138 ATP1B4Q9UN42 357 aaPredicted RBP27.25■■□□□ 1.95
KCNC4-203ENST00000413138 ARAP1Q96P48 1450 aa27.2■■□□□ 1.95
KCNC4-203ENST00000413138 CUX2O14529 1486 aa27.19■■□□□ 1.94
KCNC4-203ENST00000413138 MIER1Q8N108 512 aa27.15■■□□□ 1.94
KCNC4-203ENST00000413138 CADPSQ9ULU8 1353 aa27.14■■□□□ 1.93
KCNC4-203ENST00000413138 ERICH3Q5RHP9 1530 aa27.08■■□□□ 1.93
KCNC4-203ENST00000413138 IGF1RP08069 1367 aa27.08■■□□□ 1.93
KCNC4-203ENST00000413138 ARHGAP35Q9NRY4 1499 aa27.02■■□□□ 1.92
KCNC4-203ENST00000413138 CARMIL1Q5VZK9 1371 aa27.01■■□□□ 1.92
KCNC4-203ENST00000413138 FGD5Q6ZNL6 1462 aa27.01■■□□□ 1.91
KCNC4-203ENST00000413138 CC2D2AQ9P2K1 1620 aa26.98■■□□□ 1.91
KCNC4-203ENST00000413138 DNAJC5BQ9UF47 199 aa26.94■■□□□ 1.9
KCNC4-203ENST00000413138 NESP48681 1621 aa26.94■■□□□ 1.9
KCNC4-203ENST00000413138 RAD54L2Q9Y4B4 1467 aa26.92■■□□□ 1.9
KCNC4-203ENST00000413138 FAM50AQ14320 339 aaKnown RBP26.91■■□□□ 1.9
KCNC4-203ENST00000413138 FANCD2Q9BXW9 1451 aa26.9■■□□□ 1.9
KCNC4-203ENST00000413138 DHX57Q6P158 1386 aaKnown RBP26.89■■□□□ 1.9
KCNC4-203ENST00000413138 CCNB3Q8WWL7 1395 aa26.85■■□□□ 1.89
KCNC4-203ENST00000413138 FHOD3Q2V2M9 1422 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms