RNA–Protein interactions for RNA: ENST00000332904.7

CDHR1-201, Transcript of cadherin related family member 1, humanhuman

TSL 1 (best) BASIC

Gene CDHR1, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-201ENST00000332904 NISCHQ9Y2I1 1504 aa34.03■■■■□ 3.04
CDHR1-201ENST00000332904 HRCP23327 699 aa30.65■■■□□ 2.5
CDHR1-201ENST00000332904 SHROOM4Q9ULL8 1493 aa30.49■■■□□ 2.47
CDHR1-201ENST00000332904 SUPT5HO00267 1087 aaKnown RBP30.36■■■□□ 2.45
CDHR1-201ENST00000332904 PPARGC1BQ86YN6 1023 aaKnown RBP30.24■■■□□ 2.43
CDHR1-201ENST00000332904 PCGF6Q9BYE7 350 aa30.16■■■□□ 2.42
CDHR1-201ENST00000332904 MYO15BQ96JP2 1530 aa30.03■■■□□ 2.4
CDHR1-201ENST00000332904 CHIC1Q5VXU3 224 aa29.76■■■□□ 2.35
CDHR1-201ENST00000332904 PELP1Q8IZL8 1130 aaKnown RBP29.34■■■□□ 2.29
CDHR1-201ENST00000332904 LOC105371045A0A1W2PR82 267 aa29.22■■■□□ 2.27
CDHR1-201ENST00000332904 DCAF1Q9Y4B6 1507 aa29.16■■■□□ 2.26
CDHR1-201ENST00000332904 SCAF1Q9H7N4 1312 aaKnown RBP29.1■■■□□ 2.25
CDHR1-201ENST00000332904 TRIM26Q12899 539 aaPredicted RBP29.01■■■□□ 2.24
CDHR1-201ENST00000332904 ZCCHC6Q5VYS8 1495 aaKnown RBP28.94■■■□□ 2.22
CDHR1-201ENST00000332904 CCDC180Q9P1Z9 1646 aa28.81■■■□□ 2.2
CDHR1-201ENST00000332904 DCAF8L2P0C7V8 631 aa28.67■■■□□ 2.18
CDHR1-201ENST00000332904 ZEB1P37275 1124 aaPredicted RBP28.65■■■□□ 2.18
CDHR1-201ENST00000332904 NEUROD1Q13562 356 aa28.31■■■□□ 2.12
CDHR1-201ENST00000332904 ACIN1Q9UKV3 1341 aaKnown RBP28.28■■■□□ 2.12
CDHR1-201ENST00000332904 EHMT2Q96KQ7 1210 aa28.15■■■□□ 2.1
CDHR1-201ENST00000332904 GTF3C3Q9Y5Q9 886 aa28.14■■■□□ 2.1
CDHR1-201ENST00000332904 FAM9AQ8IZU1 332 aaPredicted RBP28.13■■■□□ 2.09
CDHR1-201ENST00000332904 MYT1Q01538 1121 aa28.09■■■□□ 2.09
CDHR1-201ENST00000332904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.96■■■□□ 2.07
CDHR1-201ENST00000332904 TRIM41Q8WV44 630 aa27.95■■■□□ 2.07
CDHR1-201ENST00000332904 CENPBP07199 599 aaPredicted RBP27.85■■■□□ 2.05
CDHR1-201ENST00000332904 DIEXFQ68CQ4 756 aaKnown RBP27.84■■■□□ 2.05
CDHR1-201ENST00000332904 CCER1Q8TC90 406 aaPredicted RBP27.83■■■□□ 2.05
CDHR1-201ENST00000332904 YTHDC1Q96MU7 727 aaKnown RBP27.54■■■□□ 2
CDHR1-201ENST00000332904 ABCC9O60706 1549 aa27.51■■□□□ 1.99
CDHR1-201ENST00000332904 RSF1Q96T23 1441 aaPredicted RBP27.49■■□□□ 1.99
CDHR1-201ENST00000332904 TTBK1Q5TCY1 1321 aaPredicted RBP27.47■■□□□ 1.99
CDHR1-201ENST00000332904 RB1CC1Q8TDY2 1594 aa27.45■■□□□ 1.98
CDHR1-201ENST00000332904 ZNF316A6NFI3 1004 aaPredicted RBP27.24■■□□□ 1.95
CDHR1-201ENST00000332904 MIER1Q8N108 512 aa27.19■■□□□ 1.94
CDHR1-201ENST00000332904 SCRIBQ14160 1630 aa27.08■■□□□ 1.93
CDHR1-201ENST00000332904 WRNQ14191 1432 aaPredicted RBP eCLIP26.8■■□□□ 1.88
CDHR1-201ENST00000332904 CEP162Q5TB80 1403 aa26.78■■□□□ 1.88
CDHR1-201ENST00000332904 CECR2Q9BXF3 1484 aa26.78■■□□□ 1.88
CDHR1-201ENST00000332904 SUPT16HQ9Y5B9 1047 aaKnown RBP26.74■■□□□ 1.87
CDHR1-201ENST00000332904 HNRNPUL2Q1KMD3 747 aaKnown RBP26.73■■□□□ 1.87
CDHR1-201ENST00000332904 MROH2BQ7Z745 1585 aa26.69■■□□□ 1.86
CDHR1-201ENST00000332904 BCL11AQ9H165 835 aa26.64■■□□□ 1.86
CDHR1-201ENST00000332904 TSHZ2Q9NRE2 1034 aa26.64■■□□□ 1.86
CDHR1-201ENST00000332904 WIZO95785 1651 aa26.63■■□□□ 1.85
CDHR1-201ENST00000332904 ANP32EQ9BTT0 268 aa26.62■■□□□ 1.85
CDHR1-201ENST00000332904 CCDC88BA6NC98 1476 aa26.58■■□□□ 1.85
CDHR1-201ENST00000332904 UBTFP17480 764 aaKnown RBP26.56■■□□□ 1.84
CDHR1-201ENST00000332904 ABCC8Q09428 1581 aa26.55■■□□□ 1.84
CDHR1-201ENST00000332904 SOGA1O94964 1423 aa26.52■■□□□ 1.84
CDHR1-201ENST00000332904 TNIKQ9UKE5 1360 aa26.51■■□□□ 1.83
CDHR1-201ENST00000332904 EIF4G1Q04637 1599 aaKnown RBP26.48■■□□□ 1.83
CDHR1-201ENST00000332904 CSRNP3Q8WYN3 585 aa26.45■■□□□ 1.83
CDHR1-201ENST00000332904 CLSPNQ9HAW4 1339 aa26.39■■□□□ 1.82
CDHR1-201ENST00000332904 RUSC2Q8N2Y8 1516 aa26.39■■□□□ 1.81
CDHR1-201ENST00000332904 BCANQ96GW7 911 aa26.32■■□□□ 1.8
CDHR1-201ENST00000332904 BAZ1AQ9NRL2 1556 aaPredicted RBP26.3■■□□□ 1.8
CDHR1-201ENST00000332904 KCNH8Q96L42 1107 aa26.22■■□□□ 1.79
CDHR1-201ENST00000332904 GOLGA3Q08378 1498 aa26.17■■□□□ 1.78
CDHR1-201ENST00000332904 RANGAP1P46060 587 aaPredicted RBP26.13■■□□□ 1.77
CDHR1-201ENST00000332904 NACADO15069 1562 aa26.11■■□□□ 1.77
CDHR1-201ENST00000332904 EEA1Q15075 1411 aa26.07■■□□□ 1.76
CDHR1-201ENST00000332904 FKBP8Q14318 412 aa26.07■■□□□ 1.76
CDHR1-201ENST00000332904 DHX57Q6P158 1386 aaKnown RBP26.06■■□□□ 1.76
CDHR1-201ENST00000332904 APLP2Q06481 763 aa26.06■■□□□ 1.76
CDHR1-201ENST00000332904 CLIP1P30622 1438 aa26.04■■□□□ 1.76
CDHR1-201ENST00000332904 RBM19Q9Y4C8 960 aaKnown RBP26■■□□□ 1.75
CDHR1-201ENST00000332904 VPS8Q8N3P4 1428 aa25.97■■□□□ 1.75
CDHR1-201ENST00000332904 SMARCA2P51531 1590 aa25.96■■□□□ 1.75
CDHR1-201ENST00000332904 TOP2AP11388 1531 aaKnown RBP25.96■■□□□ 1.75
CDHR1-201ENST00000332904 ITGAEP38570 1179 aa25.93■■□□□ 1.74
CDHR1-201ENST00000332904 CEP164Q9UPV0 1460 aa25.87■■□□□ 1.73
CDHR1-201ENST00000332904 MSH5O43196 834 aa25.82■■□□□ 1.72
CDHR1-201ENST00000332904 RAPGEF2Q9Y4G8 1499 aa25.75■■□□□ 1.71
CDHR1-201ENST00000332904 DDX10Q13206 875 aaKnown RBP25.75■■□□□ 1.71
CDHR1-201ENST00000332904 KIF21BO75037 1637 aa25.74■■□□□ 1.71
CDHR1-201ENST00000332904 NEFLP07196 543 aa25.74■■□□□ 1.71
CDHR1-201ENST00000332904 KANK4Q5T7N3 995 aaPredicted RBP25.74■■□□□ 1.71
CDHR1-201ENST00000332904 TRIM52Q96A61 297 aa25.73■■□□□ 1.71
CDHR1-201ENST00000332904 SMARCA4P51532 1647 aa25.69■■□□□ 1.7
CDHR1-201ENST00000332904 SYNJ1O43426 1573 aa25.64■■□□□ 1.7
CDHR1-201ENST00000332904 HIRIP3Q9BW71 556 aaPredicted RBP25.59■■□□□ 1.69
CDHR1-201ENST00000332904 BAZ1BQ9UIG0 1483 aaKnown RBP25.58■■□□□ 1.69
CDHR1-201ENST00000332904 IRX6P78412 446 aaPredicted RBP25.5■■□□□ 1.67
CDHR1-201ENST00000332904 ERICH6Q7L0X2 663 aa25.5■■□□□ 1.67
CDHR1-201ENST00000332904 RRBP1Q9P2E9 1410 aaKnown RBP25.47■■□□□ 1.67
CDHR1-201ENST00000332904 PPP1R15AO75807 674 aaPredicted RBP25.47■■□□□ 1.67
CDHR1-201ENST00000332904 SIN3AQ96ST3 1273 aa25.47■■□□□ 1.67
CDHR1-201ENST00000332904 ARAP1Q96P48 1450 aa25.46■■□□□ 1.67
CDHR1-201ENST00000332904 PRKCSHP14314 528 aaPredicted RBP25.45■■□□□ 1.67
CDHR1-201ENST00000332904 WDR97A6NE52 1622 aa25.45■■□□□ 1.66
CDHR1-201ENST00000332904 MAPKBP1O60336 1514 aa25.44■■□□□ 1.66
CDHR1-201ENST00000332904 RAB3GAP2Q9H2M9 1393 aa25.44■■□□□ 1.66
CDHR1-201ENST00000332904 CCNB3Q8WWL7 1395 aa25.43■■□□□ 1.66
CDHR1-201ENST00000332904 FANCIQ9NVI1 1328 aa25.42■■□□□ 1.66
CDHR1-201ENST00000332904 CUX2O14529 1486 aa25.41■■□□□ 1.66
CDHR1-201ENST00000332904 ANP32CO43423 234 aa25.37■■□□□ 1.65
CDHR1-201ENST00000332904 CDK11AQ9UQ88 783 aaPredicted RBP25.36■■□□□ 1.65
CDHR1-201ENST00000332904 CCER2I3L3R5 266 aa25.33■■□□□ 1.65
CDHR1-201ENST00000332904 DEKP35659 375 aaKnown RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms