RNA–Protein interactions for RNA: ENST00000332281.5

SNAI3-201, Transcript of snail family transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI3, Length 1,732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3-201ENST00000332281 NISCHQ9Y2I1 1504 aa42.67■■■■■ 4.42
SNAI3-201ENST00000332281 CCDC180Q9P1Z9 1646 aa37.38■■■■□ 3.57
SNAI3-201ENST00000332281 ZCCHC6Q5VYS8 1495 aaKnown RBP35.89■■■■□ 3.34
SNAI3-201ENST00000332281 ABCC9O60706 1549 aa35.86■■■■□ 3.33
SNAI3-201ENST00000332281 DCAF8L2P0C7V8 631 aa35.55■■■■□ 3.28
SNAI3-201ENST00000332281 DCAF1Q9Y4B6 1507 aa35.34■■■■□ 3.25
SNAI3-201ENST00000332281 MYO15BQ96JP2 1530 aa34.97■■■■□ 3.19
SNAI3-201ENST00000332281 NACADO15069 1562 aa34.96■■■■□ 3.19
SNAI3-201ENST00000332281 SHROOM4Q9ULL8 1493 aa34.81■■■■□ 3.16
SNAI3-201ENST00000332281 RB1CC1Q8TDY2 1594 aa34.78■■■■□ 3.16
SNAI3-201ENST00000332281 SCRIBQ14160 1630 aa34.36■■■■□ 3.09
SNAI3-201ENST00000332281 UNC13AQ9UPW8 1703 aa34.05■■■■□ 3.04
SNAI3-201ENST00000332281 PABPN1Q86U42 306 aaKnown RBP eCLIP33.78■■■■□ 3
SNAI3-201ENST00000332281 BICRAQ9NZM4 1560 aa33.72■■■□□ 2.99
SNAI3-201ENST00000332281 SUPT5HO00267 1087 aaKnown RBP33.59■■■□□ 2.97
SNAI3-201ENST00000332281 CECR2Q9BXF3 1484 aa33.21■■■□□ 2.91
SNAI3-201ENST00000332281 RSF1Q96T23 1441 aaPredicted RBP33.14■■■□□ 2.9
SNAI3-201ENST00000332281 BAZ1AQ9NRL2 1556 aaPredicted RBP32.96■■■□□ 2.87
SNAI3-201ENST00000332281 MROH2BQ7Z745 1585 aa32.94■■■□□ 2.86
SNAI3-201ENST00000332281 SMARCA4P51532 1647 aa32.88■■■□□ 2.85
SNAI3-201ENST00000332281 EIF4G1Q04637 1599 aaKnown RBP32.76■■■□□ 2.83
SNAI3-201ENST00000332281 WIZO95785 1651 aa32.7■■■□□ 2.83
SNAI3-201ENST00000332281 ATAD2BQ9ULI0 1458 aa32.48■■■□□ 2.79
SNAI3-201ENST00000332281 PEG3Q9GZU2 1588 aa32.46■■■□□ 2.79
SNAI3-201ENST00000332281 SMARCA2P51531 1590 aa32.44■■■□□ 2.78
SNAI3-201ENST00000332281 CC2D2AQ9P2K1 1620 aa32.41■■■□□ 2.78
SNAI3-201ENST00000332281 TOP2AP11388 1531 aaKnown RBP32.39■■■□□ 2.78
SNAI3-201ENST00000332281 CHIC1Q5VXU3 224 aa32.29■■■□□ 2.76
SNAI3-201ENST00000332281 BAZ1BQ9UIG0 1483 aaKnown RBP32.28■■■□□ 2.76
SNAI3-201ENST00000332281 NCAPD3P42695 1498 aa32.27■■■□□ 2.76
SNAI3-201ENST00000332281 HMGXB3Q12766 1538 aa32.15■■■□□ 2.74
SNAI3-201ENST00000332281 DNAJC5BQ9UF47 199 aa32.1■■■□□ 2.73
SNAI3-201ENST00000332281 CCDC88BA6NC98 1476 aa32.03■■■□□ 2.72
SNAI3-201ENST00000332281 TRIM41Q8WV44 630 aa31.62■■■□□ 2.65
SNAI3-201ENST00000332281 CADPSQ9ULU8 1353 aa31.44■■■□□ 2.62
SNAI3-201ENST00000332281 CFTRP13569 1480 aa31.42■■■□□ 2.62
SNAI3-201ENST00000332281 ABCC8Q09428 1581 aa31.39■■■□□ 2.62
SNAI3-201ENST00000332281 NESP48681 1621 aa31.32■■■□□ 2.6
SNAI3-201ENST00000332281 LAMC3Q9Y6N6 1575 aa31.25■■■□□ 2.59
SNAI3-201ENST00000332281 WRNQ14191 1432 aaPredicted RBP eCLIP31.21■■■□□ 2.59
SNAI3-201ENST00000332281 PRDM2Q13029 1718 aa31.2■■■□□ 2.59
SNAI3-201ENST00000332281 FANCD2Q9BXW9 1451 aa31.08■■■□□ 2.57
SNAI3-201ENST00000332281 PDS5BQ9NTI5 1447 aa31.06■■■□□ 2.56
SNAI3-201ENST00000332281 SYNJ1O43426 1573 aa31.05■■■□□ 2.56
SNAI3-201ENST00000332281 LOC105371045A0A1W2PR82 267 aa31■■■□□ 2.55
SNAI3-201ENST00000332281 FAM9AQ8IZU1 332 aaPredicted RBP30.98■■■□□ 2.55
SNAI3-201ENST00000332281 TOP2BQ02880 1626 aa30.96■■■□□ 2.55
SNAI3-201ENST00000332281 BIVM-ERCC5R4GMW8 1640 aa30.94■■■□□ 2.54
SNAI3-201ENST00000332281 CEP164Q9UPV0 1460 aa30.93■■■□□ 2.54
SNAI3-201ENST00000332281 KIF21AQ7Z4S6 1674 aa30.92■■■□□ 2.54
SNAI3-201ENST00000332281 EEA1Q15075 1411 aa30.9■■■□□ 2.54
SNAI3-201ENST00000332281 CUX1P39880 1505 aa30.83■■■□□ 2.53
SNAI3-201ENST00000332281 SOGA1O94964 1423 aa30.82■■■□□ 2.53
SNAI3-201ENST00000332281 ERCC6Q03468 1493 aa30.81■■■□□ 2.52
SNAI3-201ENST00000332281 URB2Q14146 1524 aaKnown RBP30.71■■■□□ 2.51
SNAI3-201ENST00000332281 DNMBPQ6XZF7 1577 aa30.69■■■□□ 2.5
SNAI3-201ENST00000332281 RUSC2Q8N2Y8 1516 aa30.69■■■□□ 2.5
SNAI3-201ENST00000332281 TOPBP1Q92547 1522 aa30.68■■■□□ 2.5
SNAI3-201ENST00000332281 MRC2Q9UBG0 1479 aa30.66■■■□□ 2.5
SNAI3-201ENST00000332281 CSRNP3Q8WYN3 585 aa30.64■■■□□ 2.5
SNAI3-201ENST00000332281 FGD5Q6ZNL6 1462 aa30.58■■■□□ 2.49
SNAI3-201ENST00000332281 THOC2Q8NI27 1593 aaKnown RBP30.5■■■□□ 2.47
SNAI3-201ENST00000332281 POLA1P09884 1462 aaPredicted RBP30.5■■■□□ 2.47
SNAI3-201ENST00000332281 WDR62O43379 1518 aa30.49■■■□□ 2.47
SNAI3-201ENST00000332281 EHMT2Q96KQ7 1210 aa30.48■■■□□ 2.47
SNAI3-201ENST00000332281 KIF21BO75037 1637 aa30.48■■■□□ 2.47
SNAI3-201ENST00000332281 GOLGA3Q08378 1498 aa30.44■■■□□ 2.46
SNAI3-201ENST00000332281 RAD54L2Q9Y4B4 1467 aa30.42■■■□□ 2.46
SNAI3-201ENST00000332281 KIF27Q86VH2 1401 aa30.41■■■□□ 2.46
SNAI3-201ENST00000332281 TNIKQ9UKE5 1360 aa30.38■■■□□ 2.45
SNAI3-201ENST00000332281 CUX2O14529 1486 aa30.31■■■□□ 2.44
SNAI3-201ENST00000332281 ABCA10Q8WWZ4 1543 aa30.27■■■□□ 2.44
SNAI3-201ENST00000332281 ERICH3Q5RHP9 1530 aa30.25■■■□□ 2.43
SNAI3-201ENST00000332281 PRXQ9BXM0 1461 aa30.25■■■□□ 2.43
SNAI3-201ENST00000332281 UBTFP17480 764 aaKnown RBP30.25■■■□□ 2.43
SNAI3-201ENST00000332281 TARBP1Q13395 1621 aaKnown RBP30.24■■■□□ 2.43
SNAI3-201ENST00000332281 IFT140Q96RY7 1462 aa30.21■■■□□ 2.43
SNAI3-201ENST00000332281 RAPGEF2Q9Y4G8 1499 aa30.21■■■□□ 2.43
SNAI3-201ENST00000332281 CEP162Q5TB80 1403 aa30.2■■■□□ 2.43
SNAI3-201ENST00000332281 TDRD9Q8NDG6 1382 aaKnown RBP30.2■■■□□ 2.42
SNAI3-201ENST00000332281 WDR97A6NE52 1622 aa30.19■■■□□ 2.42
SNAI3-201ENST00000332281 IGF1RP08069 1367 aa30.09■■■□□ 2.41
SNAI3-201ENST00000332281 ZNF608Q9ULD9 1512 aaPredicted RBP30.08■■■□□ 2.41
SNAI3-201ENST00000332281 AQRO60306 1485 aaKnown RBP eCLIP30.07■■■□□ 2.4
SNAI3-201ENST00000332281 GAPVD1Q14C86 1478 aa30.07■■■□□ 2.4
SNAI3-201ENST00000332281 ABCA5Q8WWZ7 1642 aa30.05■■■□□ 2.4
SNAI3-201ENST00000332281 CARMIL1Q5VZK9 1371 aa29.96■■■□□ 2.39
SNAI3-201ENST00000332281 CLIP1P30622 1438 aa29.94■■■□□ 2.38
SNAI3-201ENST00000332281 EIF4G3O43432 1585 aaKnown RBP29.94■■■□□ 2.38
SNAI3-201ENST00000332281 CUL7Q14999 1698 aa29.93■■■□□ 2.38
SNAI3-201ENST00000332281 PBRM1Q86U86 1689 aa29.9■■■□□ 2.38
SNAI3-201ENST00000332281 GRIN2BQ13224 1484 aa29.9■■■□□ 2.38
SNAI3-201ENST00000332281 TRIM26Q12899 539 aaPredicted RBP29.8■■■□□ 2.36
SNAI3-201ENST00000332281 PCGF6Q9BYE7 350 aa29.77■■■□□ 2.36
SNAI3-201ENST00000332281 SNAPC4Q5SXM2 1469 aa29.75■■■□□ 2.35
SNAI3-201ENST00000332281 FHAD1B1AJZ9 1412 aa29.73■■■□□ 2.35
SNAI3-201ENST00000332281 VPS8Q8N3P4 1428 aa29.72■■■□□ 2.35
SNAI3-201ENST00000332281 ADAMTS12P58397 1594 aa29.7■■■□□ 2.34
SNAI3-201ENST00000332281 MAGI1Q96QZ7 1491 aaPredicted RBP29.68■■■□□ 2.34
SNAI3-201ENST00000332281 FBLN2P98095 1184 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms