RNA–Protein interactions for RNA: ENST00000593209.5

GHDC-212, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-212ENST00000593209 NISCHQ9Y2I1 1504 aa42.48■■■■■ 4.39
GHDC-212ENST00000593209 CCDC180Q9P1Z9 1646 aa37.37■■■■□ 3.57
GHDC-212ENST00000593209 ABCC9O60706 1549 aa36.39■■■■□ 3.42
GHDC-212ENST00000593209 ZCCHC6Q5VYS8 1495 aaKnown RBP35.57■■■■□ 3.28
GHDC-212ENST00000593209 DCAF8L2P0C7V8 631 aa35.34■■■■□ 3.25
GHDC-212ENST00000593209 DCAF1Q9Y4B6 1507 aa35.12■■■■□ 3.21
GHDC-212ENST00000593209 NACADO15069 1562 aa35.04■■■■□ 3.2
GHDC-212ENST00000593209 RB1CC1Q8TDY2 1594 aa35.03■■■■□ 3.2
GHDC-212ENST00000593209 MYO15BQ96JP2 1530 aa34.9■■■■□ 3.18
GHDC-212ENST00000593209 SHROOM4Q9ULL8 1493 aa34.69■■■■□ 3.14
GHDC-212ENST00000593209 UNC13AQ9UPW8 1703 aa34.38■■■■□ 3.09
GHDC-212ENST00000593209 SCRIBQ14160 1630 aa34.29■■■■□ 3.08
GHDC-212ENST00000593209 PABPN1Q86U42 306 aaKnown RBP eCLIP34.09■■■■□ 3.05
GHDC-212ENST00000593209 BICRAQ9NZM4 1560 aa34.02■■■■□ 3.04
GHDC-212ENST00000593209 SUPT5HO00267 1087 aaKnown RBP33.44■■■□□ 2.94
GHDC-212ENST00000593209 DNAJC5BQ9UF47 199 aa33.11■■■□□ 2.89
GHDC-212ENST00000593209 EIF4G1Q04637 1599 aaKnown RBP33.08■■■□□ 2.89
GHDC-212ENST00000593209 CECR2Q9BXF3 1484 aa33.08■■■□□ 2.89
GHDC-212ENST00000593209 CC2D2AQ9P2K1 1620 aa32.89■■■□□ 2.86
GHDC-212ENST00000593209 RSF1Q96T23 1441 aaPredicted RBP32.88■■■□□ 2.85
GHDC-212ENST00000593209 BAZ1AQ9NRL2 1556 aaPredicted RBP32.83■■■□□ 2.85
GHDC-212ENST00000593209 MROH2BQ7Z745 1585 aa32.81■■■□□ 2.84
GHDC-212ENST00000593209 SMARCA4P51532 1647 aa32.78■■■□□ 2.84
GHDC-212ENST00000593209 WIZO95785 1651 aa32.54■■■□□ 2.8
GHDC-212ENST00000593209 ATAD2BQ9ULI0 1458 aa32.45■■■□□ 2.79
GHDC-212ENST00000593209 PEG3Q9GZU2 1588 aa32.4■■■□□ 2.78
GHDC-212ENST00000593209 SMARCA2P51531 1590 aa32.39■■■□□ 2.78
GHDC-212ENST00000593209 NCAPD3P42695 1498 aa32.33■■■□□ 2.77
GHDC-212ENST00000593209 CHIC1Q5VXU3 224 aa32.26■■■□□ 2.75
GHDC-212ENST00000593209 BAZ1BQ9UIG0 1483 aaKnown RBP32.22■■■□□ 2.75
GHDC-212ENST00000593209 HMGXB3Q12766 1538 aa32.21■■■□□ 2.75
GHDC-212ENST00000593209 TOP2AP11388 1531 aaKnown RBP32.14■■■□□ 2.74
GHDC-212ENST00000593209 CCDC88BA6NC98 1476 aa31.82■■■□□ 2.68
GHDC-212ENST00000593209 NESP48681 1621 aa31.61■■■□□ 2.65
GHDC-212ENST00000593209 LAMC3Q9Y6N6 1575 aa31.45■■■□□ 2.62
GHDC-212ENST00000593209 CADPSQ9ULU8 1353 aa31.43■■■□□ 2.62
GHDC-212ENST00000593209 TRIM41Q8WV44 630 aa31.35■■■□□ 2.61
GHDC-212ENST00000593209 CFTRP13569 1480 aa31.32■■■□□ 2.6
GHDC-212ENST00000593209 ERCC6Q03468 1493 aa31.29■■■□□ 2.6
GHDC-212ENST00000593209 ABCC8Q09428 1581 aa31.28■■■□□ 2.6
GHDC-212ENST00000593209 KIF21AQ7Z4S6 1674 aa31.24■■■□□ 2.59
GHDC-212ENST00000593209 PDS5BQ9NTI5 1447 aa31.21■■■□□ 2.59
GHDC-212ENST00000593209 PRDM2Q13029 1718 aa31.17■■■□□ 2.58
GHDC-212ENST00000593209 FANCD2Q9BXW9 1451 aa31.12■■■□□ 2.57
GHDC-212ENST00000593209 LOC105371045A0A1W2PR82 267 aa31.05■■■□□ 2.56
GHDC-212ENST00000593209 CEP164Q9UPV0 1460 aa31.03■■■□□ 2.56
GHDC-212ENST00000593209 THOC2Q8NI27 1593 aaKnown RBP30.99■■■□□ 2.55
GHDC-212ENST00000593209 SYNJ1O43426 1573 aa30.9■■■□□ 2.54
GHDC-212ENST00000593209 MRC2Q9UBG0 1479 aa30.9■■■□□ 2.54
GHDC-212ENST00000593209 WRNQ14191 1432 aaPredicted RBP eCLIP30.89■■■□□ 2.53
GHDC-212ENST00000593209 FAM9AQ8IZU1 332 aaPredicted RBP30.87■■■□□ 2.53
GHDC-212ENST00000593209 URB2Q14146 1524 aaKnown RBP30.81■■■□□ 2.52
GHDC-212ENST00000593209 WDR62O43379 1518 aa30.79■■■□□ 2.52
GHDC-212ENST00000593209 CUX2O14529 1486 aa30.73■■■□□ 2.51
GHDC-212ENST00000593209 CUX1P39880 1505 aa30.71■■■□□ 2.51
GHDC-212ENST00000593209 BIVM-ERCC5R4GMW8 1640 aa30.7■■■□□ 2.5
GHDC-212ENST00000593209 SOGA1O94964 1423 aa30.69■■■□□ 2.5
GHDC-212ENST00000593209 TOP2BQ02880 1626 aa30.69■■■□□ 2.5
GHDC-212ENST00000593209 TOPBP1Q92547 1522 aa30.67■■■□□ 2.5
GHDC-212ENST00000593209 DNMBPQ6XZF7 1577 aa30.64■■■□□ 2.49
GHDC-212ENST00000593209 RUSC2Q8N2Y8 1516 aa30.62■■■□□ 2.49
GHDC-212ENST00000593209 EEA1Q15075 1411 aa30.56■■■□□ 2.48
GHDC-212ENST00000593209 EHMT2Q96KQ7 1210 aa30.46■■■□□ 2.47
GHDC-212ENST00000593209 FGD5Q6ZNL6 1462 aa30.44■■■□□ 2.46
GHDC-212ENST00000593209 POLA1P09884 1462 aaPredicted RBP30.42■■■□□ 2.46
GHDC-212ENST00000593209 RAD54L2Q9Y4B4 1467 aa30.36■■■□□ 2.45
GHDC-212ENST00000593209 CSRNP3Q8WYN3 585 aa30.35■■■□□ 2.45
GHDC-212ENST00000593209 IFT140Q96RY7 1462 aa30.33■■■□□ 2.45
GHDC-212ENST00000593209 KIF21BO75037 1637 aa30.31■■■□□ 2.44
GHDC-212ENST00000593209 TARBP1Q13395 1621 aaKnown RBP30.31■■■□□ 2.44
GHDC-212ENST00000593209 ZNF608Q9ULD9 1512 aaPredicted RBP30.28■■■□□ 2.44
GHDC-212ENST00000593209 GOLGA3Q08378 1498 aa30.23■■■□□ 2.43
GHDC-212ENST00000593209 TNIKQ9UKE5 1360 aa30.18■■■□□ 2.42
GHDC-212ENST00000593209 ABCA10Q8WWZ4 1543 aa30.16■■■□□ 2.42
GHDC-212ENST00000593209 EIF4G3O43432 1585 aaKnown RBP30.16■■■□□ 2.42
GHDC-212ENST00000593209 WDR97A6NE52 1622 aa30.15■■■□□ 2.42
GHDC-212ENST00000593209 TDRD9Q8NDG6 1382 aaKnown RBP30.15■■■□□ 2.42
GHDC-212ENST00000593209 AQRO60306 1485 aaKnown RBP eCLIP30.15■■■□□ 2.42
GHDC-212ENST00000593209 CEP162Q5TB80 1403 aa30.09■■■□□ 2.41
GHDC-212ENST00000593209 KIF27Q86VH2 1401 aa30.07■■■□□ 2.4
GHDC-212ENST00000593209 RAPGEF2Q9Y4G8 1499 aa30.05■■■□□ 2.4
GHDC-212ENST00000593209 PRXQ9BXM0 1461 aa30.01■■■□□ 2.39
GHDC-212ENST00000593209 ERICH3Q5RHP9 1530 aa29.99■■■□□ 2.39
GHDC-212ENST00000593209 ABCA5Q8WWZ7 1642 aa29.98■■■□□ 2.39
GHDC-212ENST00000593209 GAPVD1Q14C86 1478 aa29.95■■■□□ 2.39
GHDC-212ENST00000593209 UBTFP17480 764 aaKnown RBP29.95■■■□□ 2.39
GHDC-212ENST00000593209 PCGF6Q9BYE7 350 aa29.94■■■□□ 2.38
GHDC-212ENST00000593209 PBRM1Q86U86 1689 aa29.93■■■□□ 2.38
GHDC-212ENST00000593209 IGF1RP08069 1367 aa29.9■■■□□ 2.38
GHDC-212ENST00000593209 GRIN2BQ13224 1484 aa29.88■■■□□ 2.37
GHDC-212ENST00000593209 SNAPC4Q5SXM2 1469 aa29.85■■■□□ 2.37
GHDC-212ENST00000593209 TRIM26Q12899 539 aaPredicted RBP29.8■■■□□ 2.36
GHDC-212ENST00000593209 FBLN2P98095 1184 aa29.75■■■□□ 2.35
GHDC-212ENST00000593209 CHD1O14646 1710 aa29.75■■■□□ 2.35
GHDC-212ENST00000593209 CLIP1P30622 1438 aa29.74■■■□□ 2.35
GHDC-212ENST00000593209 MAGI1Q96QZ7 1491 aaPredicted RBP29.74■■■□□ 2.35
GHDC-212ENST00000593209 CARMIL1Q5VZK9 1371 aa29.72■■■□□ 2.35
GHDC-212ENST00000593209 CUL7Q14999 1698 aa29.71■■■□□ 2.35
GHDC-212ENST00000593209 ADAMTS12P58397 1594 aa29.67■■■□□ 2.34
GHDC-212ENST00000593209 SYNJ2O15056 1496 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms