Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
MRM3Q9HC36 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.76■■□□□ 1.72
MRM3Q9HC36 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
MRM3Q9HC36 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
MRM3Q9HC36 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
MRM3Q9HC36 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
MRM3Q9HC36 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
MRM3Q9HC36 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
MRM3Q9HC36 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.75■■□□□ 1.71
MRM3Q9HC36 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
MRM3Q9HC36 AC100797.4-201ENST00000631653 1827 ntBASIC25.74■■□□□ 1.71
MRM3Q9HC36 AC135983.2-203ENST00000454486 1613 ntBASIC25.74■■□□□ 1.71
MRM3Q9HC36 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
MRM3Q9HC36 AC087741.3-201ENST00000624270 1347 ntBASIC25.74■■□□□ 1.71
MRM3Q9HC36 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
MRM3Q9HC36 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.73■■□□□ 1.71
MRM3Q9HC36 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
MRM3Q9HC36 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.72■■□□□ 1.71
MRM3Q9HC36 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
MRM3Q9HC36 AL162393.1-201ENST00000437852 946 ntBASIC25.72■■□□□ 1.71
MRM3Q9HC36 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
MRM3Q9HC36 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.72■■□□□ 1.71
MRM3Q9HC36 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
MRM3Q9HC36 LINC00273-201ENST00000539813 1452 ntBASIC25.72■■□□□ 1.71
MRM3Q9HC36 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.71■■□□□ 1.71
MRM3Q9HC36 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
MRM3Q9HC36 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
MRM3Q9HC36 RPS2P35-201ENST00000443417 897 ntBASIC25.71■■□□□ 1.71
MRM3Q9HC36 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
MRM3Q9HC36 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
MRM3Q9HC36 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
MRM3Q9HC36 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.7■■□□□ 1.7
MRM3Q9HC36 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
MRM3Q9HC36 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
MRM3Q9HC36 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
MRM3Q9HC36 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
MRM3Q9HC36 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.69■■□□□ 1.7
MRM3Q9HC36 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
MRM3Q9HC36 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
MRM3Q9HC36 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
MRM3Q9HC36 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
MRM3Q9HC36 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.68■■□□□ 1.7
MRM3Q9HC36 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
MRM3Q9HC36 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
MRM3Q9HC36 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.67■■□□□ 1.7
MRM3Q9HC36 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.67■■□□□ 1.7
MRM3Q9HC36 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
MRM3Q9HC36 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
MRM3Q9HC36 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.66■■□□□ 1.7
MRM3Q9HC36 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
MRM3Q9HC36 WHAMMP2-203ENST00000563942 1603 ntBASIC25.66■■□□□ 1.7
MRM3Q9HC36 BX255925.1-201ENST00000566954 1854 ntBASIC25.66■■□□□ 1.7
MRM3Q9HC36 AP002414.2-202ENST00000590929 1450 ntBASIC25.66■■□□□ 1.7
MRM3Q9HC36 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
MRM3Q9HC36 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
MRM3Q9HC36 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
MRM3Q9HC36 AC044849.2-201ENST00000606596 710 ntBASIC25.64■■□□□ 1.7
MRM3Q9HC36 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.63■■□□□ 1.69
MRM3Q9HC36 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
MRM3Q9HC36 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
MRM3Q9HC36 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
MRM3Q9HC36 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.61■■□□□ 1.69
MRM3Q9HC36 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.6■■□□□ 1.69
MRM3Q9HC36 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
MRM3Q9HC36 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
MRM3Q9HC36 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.6■■□□□ 1.69
MRM3Q9HC36 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
MRM3Q9HC36 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
MRM3Q9HC36 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
MRM3Q9HC36 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
MRM3Q9HC36 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.59■■□□□ 1.69
MRM3Q9HC36 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
MRM3Q9HC36 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
MRM3Q9HC36 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.58■■□□□ 1.69
MRM3Q9HC36 LINC01003-201ENST00000564834 1764 ntBASIC25.58■■□□□ 1.69
MRM3Q9HC36 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
MRM3Q9HC36 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
MRM3Q9HC36 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
MRM3Q9HC36 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.57■■□□□ 1.68
MRM3Q9HC36 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.57■■□□□ 1.68
MRM3Q9HC36 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
MRM3Q9HC36 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
MRM3Q9HC36 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
MRM3Q9HC36 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
MRM3Q9HC36 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.56■■□□□ 1.68
MRM3Q9HC36 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
MRM3Q9HC36 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.55■■□□□ 1.68
MRM3Q9HC36 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
MRM3Q9HC36 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.54■■□□□ 1.68
MRM3Q9HC36 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
MRM3Q9HC36 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
MRM3Q9HC36 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.53■■□□□ 1.68
MRM3Q9HC36 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.53■■□□□ 1.68
MRM3Q9HC36 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.53■■□□□ 1.68
MRM3Q9HC36 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
MRM3Q9HC36 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
MRM3Q9HC36 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.53■■□□□ 1.68
MRM3Q9HC36 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.52■■□□□ 1.68
MRM3Q9HC36 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
MRM3Q9HC36 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms