Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.7■■■□□ 2.34
USH1GQ495M9 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.69■■■□□ 2.34
USH1GQ495M9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC29.69■■■□□ 2.34
USH1GQ495M9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
USH1GQ495M9 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
USH1GQ495M9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
USH1GQ495M9 ABCB10P1-201ENST00000614297 2181 ntBASIC29.64■■■□□ 2.34
USH1GQ495M9 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
USH1GQ495M9 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
USH1GQ495M9 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
USH1GQ495M9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.62■■■□□ 2.33
USH1GQ495M9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
USH1GQ495M9 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.61■■■□□ 2.33
USH1GQ495M9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29.6■■■□□ 2.33
USH1GQ495M9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
USH1GQ495M9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC29.59■■■□□ 2.33
USH1GQ495M9 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.59■■■□□ 2.33
USH1GQ495M9 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.59■■■□□ 2.33
USH1GQ495M9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.59■■■□□ 2.33
USH1GQ495M9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
USH1GQ495M9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC29.59■■■□□ 2.33
USH1GQ495M9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
USH1GQ495M9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
USH1GQ495M9 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
USH1GQ495M9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC29.58■■■□□ 2.33
USH1GQ495M9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
USH1GQ495M9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.57■■■□□ 2.32
USH1GQ495M9 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
USH1GQ495M9 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
USH1GQ495M9 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
USH1GQ495M9 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
USH1GQ495M9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
USH1GQ495M9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
USH1GQ495M9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
USH1GQ495M9 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
USH1GQ495M9 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
USH1GQ495M9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
USH1GQ495M9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
USH1GQ495M9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
USH1GQ495M9 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
USH1GQ495M9 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
USH1GQ495M9 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
USH1GQ495M9 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
USH1GQ495M9 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
USH1GQ495M9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
USH1GQ495M9 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
USH1GQ495M9 AC110285.7-201ENST00000624417 1536 ntBASIC29.52■■■□□ 2.32
USH1GQ495M9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.32
USH1GQ495M9 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.51■■■□□ 2.31
USH1GQ495M9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.51■■■□□ 2.31
USH1GQ495M9 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.51■■■□□ 2.31
USH1GQ495M9 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
USH1GQ495M9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
USH1GQ495M9 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC29.49■■■□□ 2.31
USH1GQ495M9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
USH1GQ495M9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
USH1GQ495M9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
USH1GQ495M9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
USH1GQ495M9 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.48■■■□□ 2.31
USH1GQ495M9 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.48■■■□□ 2.31
USH1GQ495M9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
USH1GQ495M9 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
USH1GQ495M9 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.47■■■□□ 2.31
USH1GQ495M9 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.47■■■□□ 2.31
USH1GQ495M9 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
USH1GQ495M9 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
USH1GQ495M9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
USH1GQ495M9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC29.46■■■□□ 2.31
USH1GQ495M9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.46■■■□□ 2.31
USH1GQ495M9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.46■■■□□ 2.31
USH1GQ495M9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
USH1GQ495M9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
USH1GQ495M9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
USH1GQ495M9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC29.45■■■□□ 2.31
USH1GQ495M9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
USH1GQ495M9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
USH1GQ495M9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
USH1GQ495M9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
USH1GQ495M9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
USH1GQ495M9 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
USH1GQ495M9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
USH1GQ495M9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC29.44■■■□□ 2.3
USH1GQ495M9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC29.44■■■□□ 2.3
USH1GQ495M9 AL139393.2-201ENST00000608721 2025 ntBASIC29.44■■■□□ 2.3
USH1GQ495M9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
USH1GQ495M9 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.43■■■□□ 2.3
USH1GQ495M9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
USH1GQ495M9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
USH1GQ495M9 AC100797.4-201ENST00000631653 1827 ntBASIC29.42■■■□□ 2.3
USH1GQ495M9 AP004833.2-201ENST00000532228 1454 ntBASIC29.42■■■□□ 2.3
USH1GQ495M9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
USH1GQ495M9 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
USH1GQ495M9 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
USH1GQ495M9 HSD17B1P1-201ENST00000590052 955 ntBASIC29.41■■■□□ 2.3
USH1GQ495M9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
USH1GQ495M9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
USH1GQ495M9 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
USH1GQ495M9 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
USH1GQ495M9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.4■■■□□ 2.3
USH1GQ495M9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms