Protein–RNA interactions for Protein: O60882

MMP20, Matrix metalloproteinase-20, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP20O60882 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
MMP20O60882 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
MMP20O60882 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.72■■□□□ 1.71
MMP20O60882 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
MMP20O60882 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.71■■□□□ 1.71
MMP20O60882 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
MMP20O60882 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.71■■□□□ 1.71
MMP20O60882 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
MMP20O60882 ABCB10P1-201ENST00000614297 2181 ntBASIC25.69■■□□□ 1.7
MMP20O60882 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
MMP20O60882 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
MMP20O60882 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
MMP20O60882 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.68■■□□□ 1.7
MMP20O60882 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
MMP20O60882 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.66■■□□□ 1.7
MMP20O60882 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
MMP20O60882 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.65■■□□□ 1.7
MMP20O60882 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
MMP20O60882 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.64■■□□□ 1.7
MMP20O60882 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.64■■□□□ 1.7
MMP20O60882 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.64■■□□□ 1.7
MMP20O60882 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.64■■□□□ 1.7
MMP20O60882 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
MMP20O60882 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
MMP20O60882 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
MMP20O60882 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
MMP20O60882 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
MMP20O60882 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
MMP20O60882 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.63■■□□□ 1.69
MMP20O60882 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
MMP20O60882 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
MMP20O60882 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
MMP20O60882 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
MMP20O60882 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
MMP20O60882 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.62■■□□□ 1.69
MMP20O60882 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
MMP20O60882 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
MMP20O60882 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.61■■□□□ 1.69
MMP20O60882 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
MMP20O60882 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.6■■□□□ 1.69
MMP20O60882 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.6■■□□□ 1.69
MMP20O60882 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
MMP20O60882 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
MMP20O60882 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
MMP20O60882 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
MMP20O60882 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
MMP20O60882 AC110285.7-201ENST00000624417 1536 ntBASIC25.58■■□□□ 1.69
MMP20O60882 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.58■■□□□ 1.69
MMP20O60882 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
MMP20O60882 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
MMP20O60882 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.57■■□□□ 1.68
MMP20O60882 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
MMP20O60882 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
MMP20O60882 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.57■■□□□ 1.68
MMP20O60882 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
MMP20O60882 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
MMP20O60882 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.56■■□□□ 1.68
MMP20O60882 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
MMP20O60882 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.56■■□□□ 1.68
MMP20O60882 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
MMP20O60882 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
MMP20O60882 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
MMP20O60882 AP004833.2-201ENST00000532228 1454 ntBASIC25.54■■□□□ 1.68
MMP20O60882 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.54■■□□□ 1.68
MMP20O60882 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
MMP20O60882 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
MMP20O60882 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.54■■□□□ 1.68
MMP20O60882 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
MMP20O60882 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
MMP20O60882 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
MMP20O60882 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
MMP20O60882 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.53■■□□□ 1.68
MMP20O60882 AL139393.2-201ENST00000608721 2025 ntBASIC25.53■■□□□ 1.68
MMP20O60882 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
MMP20O60882 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
MMP20O60882 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
MMP20O60882 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
MMP20O60882 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
MMP20O60882 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.51■■□□□ 1.67
MMP20O60882 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
MMP20O60882 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
MMP20O60882 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.5■■□□□ 1.67
MMP20O60882 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
MMP20O60882 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.49■■□□□ 1.67
MMP20O60882 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
MMP20O60882 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
MMP20O60882 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
MMP20O60882 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
MMP20O60882 AC100797.4-201ENST00000631653 1827 ntBASIC25.49■■□□□ 1.67
MMP20O60882 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
MMP20O60882 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
MMP20O60882 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
MMP20O60882 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
MMP20O60882 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
MMP20O60882 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
MMP20O60882 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
MMP20O60882 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
MMP20O60882 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.47■■□□□ 1.67
MMP20O60882 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
MMP20O60882 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms