Protein–RNA interactions for Protein: A6NFQ2

TCAF2, TRPM8 channel-associated factor 2, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF2A6NFQ2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TCAF2A6NFQ2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TCAF2A6NFQ2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.49■■□□□ 1.83
TCAF2A6NFQ2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TCAF2A6NFQ2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TCAF2A6NFQ2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.48■■□□□ 1.83
TCAF2A6NFQ2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TCAF2A6NFQ2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TCAF2A6NFQ2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.48■■□□□ 1.83
TCAF2A6NFQ2 CR559946.2-201ENST00000623684 991 ntBASIC26.48■■□□□ 1.83
TCAF2A6NFQ2 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.48■■□□□ 1.83
TCAF2A6NFQ2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.48■■□□□ 1.83
TCAF2A6NFQ2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TCAF2A6NFQ2 MIR3648-2-201ENST00000581792 180 ntBASIC26.47■■□□□ 1.83
TCAF2A6NFQ2 MIR3648-1-201ENST00000615959 180 ntBASIC26.47■■□□□ 1.83
TCAF2A6NFQ2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.47■■□□□ 1.83
TCAF2A6NFQ2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TCAF2A6NFQ2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
TCAF2A6NFQ2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
TCAF2A6NFQ2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TCAF2A6NFQ2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
TCAF2A6NFQ2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TCAF2A6NFQ2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
TCAF2A6NFQ2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.46■■□□□ 1.83
TCAF2A6NFQ2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TCAF2A6NFQ2 HLA-V-202ENST00000446817 847 ntBASIC26.45■■□□□ 1.82
TCAF2A6NFQ2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
TCAF2A6NFQ2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
TCAF2A6NFQ2 ABCB10P3-201ENST00000561950 2166 ntBASIC26.44■■□□□ 1.82
TCAF2A6NFQ2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
TCAF2A6NFQ2 AP004833.2-201ENST00000532228 1454 ntBASIC26.44■■□□□ 1.82
TCAF2A6NFQ2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TCAF2A6NFQ2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TCAF2A6NFQ2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TCAF2A6NFQ2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TCAF2A6NFQ2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TCAF2A6NFQ2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
TCAF2A6NFQ2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TCAF2A6NFQ2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
TCAF2A6NFQ2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TCAF2A6NFQ2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.42■■□□□ 1.82
TCAF2A6NFQ2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.42■■□□□ 1.82
TCAF2A6NFQ2 AC016575.1-201ENST00000607026 382 ntBASIC26.42■■□□□ 1.82
TCAF2A6NFQ2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TCAF2A6NFQ2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
TCAF2A6NFQ2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TCAF2A6NFQ2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TCAF2A6NFQ2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.41■■□□□ 1.82
TCAF2A6NFQ2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TCAF2A6NFQ2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TCAF2A6NFQ2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
TCAF2A6NFQ2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TCAF2A6NFQ2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
TCAF2A6NFQ2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.39■■□□□ 1.82
TCAF2A6NFQ2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
TCAF2A6NFQ2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TCAF2A6NFQ2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TCAF2A6NFQ2 AL139393.2-201ENST00000608721 2025 ntBASIC26.39■■□□□ 1.81
TCAF2A6NFQ2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.39■■□□□ 1.81
TCAF2A6NFQ2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.38■■□□□ 1.81
TCAF2A6NFQ2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TCAF2A6NFQ2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.37■■□□□ 1.81
TCAF2A6NFQ2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.37■■□□□ 1.81
TCAF2A6NFQ2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.36■■□□□ 1.81
TCAF2A6NFQ2 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.36■■□□□ 1.81
TCAF2A6NFQ2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.36■■□□□ 1.81
TCAF2A6NFQ2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.36■■□□□ 1.81
TCAF2A6NFQ2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TCAF2A6NFQ2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
TCAF2A6NFQ2 MIR639-201ENST00000384974 98 ntBASIC26.35■■□□□ 1.81
TCAF2A6NFQ2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TCAF2A6NFQ2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TCAF2A6NFQ2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TCAF2A6NFQ2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TCAF2A6NFQ2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.32■■□□□ 1.8
TCAF2A6NFQ2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TCAF2A6NFQ2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TCAF2A6NFQ2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.3■■□□□ 1.8
TCAF2A6NFQ2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
TCAF2A6NFQ2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TCAF2A6NFQ2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.29■■□□□ 1.8
TCAF2A6NFQ2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.29■■□□□ 1.8
TCAF2A6NFQ2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.29■■□□□ 1.8
TCAF2A6NFQ2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TCAF2A6NFQ2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
TCAF2A6NFQ2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.29■■□□□ 1.8
TCAF2A6NFQ2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
TCAF2A6NFQ2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TCAF2A6NFQ2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.28■■□□□ 1.8
TCAF2A6NFQ2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TCAF2A6NFQ2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.27■■□□□ 1.8
TCAF2A6NFQ2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TCAF2A6NFQ2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.26■■□□□ 1.79
TCAF2A6NFQ2 AC110285.7-201ENST00000624417 1536 ntBASIC26.26■■□□□ 1.79
TCAF2A6NFQ2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TCAF2A6NFQ2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
TCAF2A6NFQ2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TCAF2A6NFQ2 MIR4449-201ENST00000578365 66 ntBASIC26.24■■□□□ 1.79
TCAF2A6NFQ2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.24■■□□□ 1.79
TCAF2A6NFQ2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms