Protein–RNA interactions for Protein: A6NFQ2

TCAF2, TRPM8 channel-associated factor 2, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF2A6NFQ2 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.31■■■■□ 3.24
TCAF2A6NFQ2 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
TCAF2A6NFQ2 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.27■■■■□ 3.08
TCAF2A6NFQ2 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
TCAF2A6NFQ2 AL356512.1-201ENST00000607453 1739 ntBASIC34.23■■■■□ 3.07
TCAF2A6NFQ2 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
TCAF2A6NFQ2 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.14■■■■□ 3.06
TCAF2A6NFQ2 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.6■■■□□ 2.97
TCAF2A6NFQ2 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.48■■■□□ 2.95
TCAF2A6NFQ2 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.34■■■□□ 2.93
TCAF2A6NFQ2 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.27■■■□□ 2.92
TCAF2A6NFQ2 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.03■■■□□ 2.88
TCAF2A6NFQ2 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.02■■■□□ 2.88
TCAF2A6NFQ2 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.82■■■□□ 2.85
TCAF2A6NFQ2 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.82■■■□□ 2.84
TCAF2A6NFQ2 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.78■■■□□ 2.84
TCAF2A6NFQ2 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
TCAF2A6NFQ2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.67■■■□□ 2.82
TCAF2A6NFQ2 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.58■■■□□ 2.81
TCAF2A6NFQ2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.56■■■□□ 2.8
TCAF2A6NFQ2 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.77
TCAF2A6NFQ2 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
TCAF2A6NFQ2 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
TCAF2A6NFQ2 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TCAF2A6NFQ2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
TCAF2A6NFQ2 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
TCAF2A6NFQ2 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
TCAF2A6NFQ2 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
TCAF2A6NFQ2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
TCAF2A6NFQ2 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
TCAF2A6NFQ2 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
TCAF2A6NFQ2 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TCAF2A6NFQ2 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.59■■■□□ 2.65
TCAF2A6NFQ2 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.57■■■□□ 2.65
TCAF2A6NFQ2 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.51■■■□□ 2.63
TCAF2A6NFQ2 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.5■■■□□ 2.63
TCAF2A6NFQ2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TCAF2A6NFQ2 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.45■■■□□ 2.63
TCAF2A6NFQ2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
TCAF2A6NFQ2 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TCAF2A6NFQ2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
TCAF2A6NFQ2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TCAF2A6NFQ2 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.24■■■□□ 2.59
TCAF2A6NFQ2 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TCAF2A6NFQ2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
TCAF2A6NFQ2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
TCAF2A6NFQ2 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.15■■■□□ 2.58
TCAF2A6NFQ2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TCAF2A6NFQ2 AC015813.7-201ENST00000623294 581 ntBASIC31.1■■■□□ 2.57
TCAF2A6NFQ2 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
TCAF2A6NFQ2 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
TCAF2A6NFQ2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.91■■■□□ 2.54
TCAF2A6NFQ2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.89■■■□□ 2.54
TCAF2A6NFQ2 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.89■■■□□ 2.54
TCAF2A6NFQ2 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
TCAF2A6NFQ2 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
TCAF2A6NFQ2 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
TCAF2A6NFQ2 AC006077.2-201ENST00000623591 457 ntBASIC30.77■■■□□ 2.52
TCAF2A6NFQ2 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.77■■■□□ 2.52
TCAF2A6NFQ2 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.76■■■□□ 2.51
TCAF2A6NFQ2 ZNRF2P1-201ENST00000441407 443 ntBASIC30.65■■■□□ 2.5
TCAF2A6NFQ2 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TCAF2A6NFQ2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
TCAF2A6NFQ2 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
TCAF2A6NFQ2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
TCAF2A6NFQ2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
TCAF2A6NFQ2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
TCAF2A6NFQ2 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.47■■■□□ 2.47
TCAF2A6NFQ2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
TCAF2A6NFQ2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
TCAF2A6NFQ2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
TCAF2A6NFQ2 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
TCAF2A6NFQ2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.33■■■□□ 2.45
TCAF2A6NFQ2 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.45
TCAF2A6NFQ2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
TCAF2A6NFQ2 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
TCAF2A6NFQ2 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TCAF2A6NFQ2 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
TCAF2A6NFQ2 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
TCAF2A6NFQ2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
TCAF2A6NFQ2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
TCAF2A6NFQ2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.11■■■□□ 2.41
TCAF2A6NFQ2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
TCAF2A6NFQ2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
TCAF2A6NFQ2 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
TCAF2A6NFQ2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
TCAF2A6NFQ2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.03■■■□□ 2.4
TCAF2A6NFQ2 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
TCAF2A6NFQ2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
TCAF2A6NFQ2 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
TCAF2A6NFQ2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.94■■■□□ 2.38
TCAF2A6NFQ2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.92■■■□□ 2.38
TCAF2A6NFQ2 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.91■■■□□ 2.38
TCAF2A6NFQ2 AP002365.1-201ENST00000603448 772 ntBASIC29.91■■■□□ 2.38
TCAF2A6NFQ2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
TCAF2A6NFQ2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
TCAF2A6NFQ2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.78■■■□□ 2.36
TCAF2A6NFQ2 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
TCAF2A6NFQ2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
TCAF2A6NFQ2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.77■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms