Protein–RNA interactions for Protein: Q9BYP9

KRTAP9-9, Keratin-associated protein 9-9, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-9Q9BYP9 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
KRTAP9-9Q9BYP9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
KRTAP9-9Q9BYP9 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
KRTAP9-9Q9BYP9 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC3.02□□□□□ -1.93
KRTAP9-9Q9BYP9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 GRAMD1B-203ENST00000456860 2805 ntTSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 SPIDR-206ENST00000518074 2819 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 C2-209ENST00000452323 1999 ntTSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 TRIM29-201ENST00000341846 3328 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 ZNF561-201ENST00000302851 4693 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 SLC36A3-201ENST00000335230 2456 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 TMEM139-204ENST00000409541 1907 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 CSPG4P11-201ENST00000560634 4910 ntBASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 WHRN-204ENST00000374059 3278 ntTSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 VWA5A-202ENST00000392744 2691 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 SLC6A4-201ENST00000261707 6604 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 NR2E1-201ENST00000368983 2612 ntTSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 NCDN-202ENST00000373243 3683 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 AKAP4-202ENST00000376064 2864 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 KDM5D-201ENST00000317961 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 CCDC148-201ENST00000283233 3122 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 ERCC1-204ENST00000423698 3119 ntTSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 TAF1C-218ENST00000567759 3879 ntAPPRIS P3 TSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 RCC1-203ENST00000373833 2844 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 USHBP1-201ENST00000252597 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 LINC00547-201ENST00000612438 3314 ntTSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 SLC39A9-202ENST00000336643 3560 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 MRPL55-203ENST00000336520 744 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 SNORA63.1-201ENST00000362493 131 ntBASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 SNORA27.1-201ENST00000362604 124 ntBASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 SNORD45.1-201ENST00000363181 77 ntBASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 Y_RNA.173-201ENST00000363776 113 ntBASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 LAMTOR2-201ENST00000368302 587 ntTSL 3 BASIC3.01□□□□□ -1.93
KRTAP9-9Q9BYP9 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 150.9 ms