RNA–Protein interactions for RNA: ENST00000317961.8

KDM5D-201, Transcript of lysine demethylase 5D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM5D, Length 5,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5D-201ENST00000317961 NISCHQ9Y2I1 1504 aa21.53■■□□□ 1.04
KDM5D-201ENST00000317961 DCAF8L2P0C7V8 631 aa20.33■□□□□ 0.84
KDM5D-201ENST00000317961 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
KDM5D-201ENST00000317961 SUPT5HO00267 1087 aaKnown RBP19.15■□□□□ 0.66
KDM5D-201ENST00000317961 CCDC180Q9P1Z9 1646 aa18.28■□□□□ 0.52
KDM5D-201ENST00000317961 FAM9AQ8IZU1 332 aaPredicted RBP18.25■□□□□ 0.51
KDM5D-201ENST00000317961 ABCC9O60706 1549 aa18.1■□□□□ 0.49
KDM5D-201ENST00000317961 TRIM41Q8WV44 630 aa17.99■□□□□ 0.47
KDM5D-201ENST00000317961 EHMT2Q96KQ7 1210 aa17.96■□□□□ 0.47
KDM5D-201ENST00000317961 ZCCHC6Q5VYS8 1495 aaKnown RBP17.94■□□□□ 0.46
KDM5D-201ENST00000317961 APLP2Q06481 763 aa17.91■□□□□ 0.46
KDM5D-201ENST00000317961 PABPN1Q86U42 306 aaKnown RBP eCLIP17.61■□□□□ 0.412e-6■■■□□ 15.7
KDM5D-201ENST00000317961 SCRIBQ14160 1630 aa17.57■□□□□ 0.4
KDM5D-201ENST00000317961 UBTFP17480 764 aaKnown RBP17.55■□□□□ 0.4
KDM5D-201ENST00000317961 CHIC1Q5VXU3 224 aa17.52■□□□□ 0.4
KDM5D-201ENST00000317961 RB1CC1Q8TDY2 1594 aa17.49■□□□□ 0.39
KDM5D-201ENST00000317961 NACADO15069 1562 aa17.45■□□□□ 0.38
KDM5D-201ENST00000317961 PCGF6Q9BYE7 350 aa17.44■□□□□ 0.38
KDM5D-201ENST00000317961 DCAF1Q9Y4B6 1507 aa17.42■□□□□ 0.38
KDM5D-201ENST00000317961 RANGAP1P46060 587 aaPredicted RBP17.4■□□□□ 0.38
KDM5D-201ENST00000317961 ZEB1P37275 1124 aaPredicted RBP17.36■□□□□ 0.37
KDM5D-201ENST00000317961 TTBK1Q5TCY1 1321 aaPredicted RBP17.33■□□□□ 0.36
KDM5D-201ENST00000317961 ATP1B4Q9UN42 357 aaPredicted RBP17.27■□□□□ 0.36
KDM5D-201ENST00000317961 PELP1Q8IZL8 1130 aaKnown RBP17.19■□□□□ 0.34
KDM5D-201ENST00000317961 TRIM26Q12899 539 aaPredicted RBP17.17■□□□□ 0.34
KDM5D-201ENST00000317961 CCER1Q8TC90 406 aaPredicted RBP17.15■□□□□ 0.34
KDM5D-201ENST00000317961 LOC105371045A0A1W2PR82 267 aa17.13■□□□□ 0.33
KDM5D-201ENST00000317961 MYO15BQ96JP2 1530 aa17.04■□□□□ 0.32
KDM5D-201ENST00000317961 MYT1LQ9UL68 1186 aa16.99■□□□□ 0.31
KDM5D-201ENST00000317961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.97■□□□□ 0.31
KDM5D-201ENST00000317961 HNRNPUL2Q1KMD3 747 aaKnown RBP16.97■□□□□ 0.31
KDM5D-201ENST00000317961 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.31
KDM5D-201ENST00000317961 PPARGC1BQ86YN6 1023 aaKnown RBP16.93■□□□□ 0.3
KDM5D-201ENST00000317961 BAZ1AQ9NRL2 1556 aaPredicted RBP16.9■□□□□ 0.3
KDM5D-201ENST00000317961 FBLN2P98095 1184 aa16.88■□□□□ 0.29
KDM5D-201ENST00000317961 CSRNP3Q8WYN3 585 aa16.83■□□□□ 0.28
KDM5D-201ENST00000317961 BAZ1BQ9UIG0 1483 aaKnown RBP16.79■□□□□ 0.28
KDM5D-201ENST00000317961 HRCP23327 699 aa16.74■□□□□ 0.27
KDM5D-201ENST00000317961 CENPBP07199 599 aaPredicted RBP16.7■□□□□ 0.26
KDM5D-201ENST00000317961 ITGAEP38570 1179 aa16.69■□□□□ 0.26
KDM5D-201ENST00000317961 CECR2Q9BXF3 1484 aa16.66■□□□□ 0.26
KDM5D-201ENST00000317961 EEA1Q15075 1411 aa16.63■□□□□ 0.25
KDM5D-201ENST00000317961 NPM1P06748 294 aaKnown RBP eCLIP16.61■□□□□ 0.25
KDM5D-201ENST00000317961 SMARCA2P51531 1590 aa16.59■□□□□ 0.25
KDM5D-201ENST00000317961 MROH2BQ7Z745 1585 aa16.56■□□□□ 0.24
KDM5D-201ENST00000317961 FAM50AQ14320 339 aaKnown RBP16.55■□□□□ 0.24
KDM5D-201ENST00000317961 ERICH6Q7L0X2 663 aa16.55■□□□□ 0.24
KDM5D-201ENST00000317961 WRNQ14191 1432 aaPredicted RBP eCLIP16.55■□□□□ 0.24
KDM5D-201ENST00000317961 ERCC6Q03468 1493 aa16.52■□□□□ 0.23
KDM5D-201ENST00000317961 TOP2AP11388 1531 aaKnown RBP16.48■□□□□ 0.23
KDM5D-201ENST00000317961 GOLGA3Q08378 1498 aa16.45■□□□□ 0.22
KDM5D-201ENST00000317961 CCDC88BA6NC98 1476 aa16.41■□□□□ 0.22
KDM5D-201ENST00000317961 SMARCA4P51532 1647 aa16.4■□□□□ 0.22
KDM5D-201ENST00000317961 CDK11AQ9UQ88 783 aaPredicted RBP16.4■□□□□ 0.22
KDM5D-201ENST00000317961 P3H3Q8IVL6 736 aa16.39■□□□□ 0.22
KDM5D-201ENST00000317961 WIZO95785 1651 aa16.39■□□□□ 0.21
KDM5D-201ENST00000317961 KIF27Q86VH2 1401 aa16.39■□□□□ 0.21
KDM5D-201ENST00000317961 CEP164Q9UPV0 1460 aa16.36■□□□□ 0.21
KDM5D-201ENST00000317961 CHMP7Q8WUX9 453 aaPredicted RBP16.36■□□□□ 0.21
KDM5D-201ENST00000317961 TRIM52Q96A61 297 aa16.34■□□□□ 0.21
KDM5D-201ENST00000317961 CLIP1P30622 1438 aa16.34■□□□□ 0.21
KDM5D-201ENST00000317961 ESF1Q9H501 851 aaKnown RBP16.32■□□□□ 0.2
KDM5D-201ENST00000317961 TNIKQ9UKE5 1360 aa16.29■□□□□ 0.2
KDM5D-201ENST00000317961 NEFLP07196 543 aa16.28■□□□□ 0.2
KDM5D-201ENST00000317961 CEP162Q5TB80 1403 aa16.27■□□□□ 0.2
KDM5D-201ENST00000317961 ATAD2BQ9ULI0 1458 aa16.26■□□□□ 0.19
KDM5D-201ENST00000317961 YTHDC1Q96MU7 727 aaKnown RBP16.26■□□□□ 0.19
KDM5D-201ENST00000317961 MYT1Q01538 1121 aa16.2■□□□□ 0.18
KDM5D-201ENST00000317961 PDS5BQ9NTI5 1447 aa16.18■□□□□ 0.18
KDM5D-201ENST00000317961 NEUROD1Q13562 356 aa16.18■□□□□ 0.18
KDM5D-201ENST00000317961 POLR3GLQ9BT43 218 aa16.17■□□□□ 0.18
KDM5D-201ENST00000317961 ARID3CA6NKF2 412 aa16.16■□□□□ 0.18
KDM5D-201ENST00000317961 DIEXFQ68CQ4 756 aaKnown RBP16.16■□□□□ 0.18
KDM5D-201ENST00000317961 ABCC8Q09428 1581 aa16.16■□□□□ 0.18
KDM5D-201ENST00000317961 CUX2O14529 1486 aa16.12■□□□□ 0.17
KDM5D-201ENST00000317961 MTUS2Q5JR59 1369 aa16.12■□□□□ 0.17
KDM5D-201ENST00000317961 CADPSQ9ULU8 1353 aa16.11■□□□□ 0.17
KDM5D-201ENST00000317961 ZNF777Q9ULD5 760 aaPredicted RBP16.11■□□□□ 0.17
KDM5D-201ENST00000317961 SOGA1O94964 1423 aa16.1■□□□□ 0.17
KDM5D-201ENST00000317961 TRHP20396 242 aaPredicted RBP16.08■□□□□ 0.16
KDM5D-201ENST00000317961 CARMIL1Q5VZK9 1371 aa16.07■□□□□ 0.16
KDM5D-201ENST00000317961 ZNF316A6NFI3 1004 aaPredicted RBP16.05■□□□□ 0.16
KDM5D-201ENST00000317961 BCANQ96GW7 911 aa16.05■□□□□ 0.16
KDM5D-201ENST00000317961 ACIN1Q9UKV3 1341 aaKnown RBP16.04■□□□□ 0.16
KDM5D-201ENST00000317961 FHAD1B1AJZ9 1412 aa16.03■□□□□ 0.16
KDM5D-201ENST00000317961 NCAPD3P42695 1498 aa16■□□□□ 0.15
KDM5D-201ENST00000317961 EIF4G1Q04637 1599 aaKnown RBP16■□□□□ 0.15
KDM5D-201ENST00000317961 TONSLQ96HA7 1378 aa15.95■□□□□ 0.14
KDM5D-201ENST00000317961 ANP32CO43423 234 aa15.94■□□□□ 0.14
KDM5D-201ENST00000317961 ZNF326Q5BKZ1 582 aaKnown RBP15.94■□□□□ 0.14
KDM5D-201ENST00000317961 PLPPR3Q6T4P5 718 aa15.92■□□□□ 0.14
KDM5D-201ENST00000317961 PLEKHD1A6NEE1 506 aa15.92■□□□□ 0.14
KDM5D-201ENST00000317961 FANCD2Q9BXW9 1451 aa15.91■□□□□ 0.14
KDM5D-201ENST00000317961 TSPY4P0CV99 314 aa15.91■□□□□ 0.14
KDM5D-201ENST00000317961 TSPY10P0CW01 314 aa15.91■□□□□ 0.14
KDM5D-201ENST00000317961 STAG3Q9UJ98 1225 aa15.91■□□□□ 0.14
KDM5D-201ENST00000317961 VPS8Q8N3P4 1428 aa15.9■□□□□ 0.14
KDM5D-201ENST00000317961 SLC4A1APQ9BWU0 796 aaKnown RBP15.9■□□□□ 0.14
KDM5D-201ENST00000317961 RAPGEF2Q9Y4G8 1499 aa15.88■□□□□ 0.13
KDM5D-201ENST00000317961 HMGXB3Q12766 1538 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms