RNA–Protein interactions for RNA: ENST00000456860.6

GRAMD1B-203, Transcript of GRAM domain containing 1B, humanhuman

TSL 2 BASIC

Gene GRAMD1B, Length 2,805 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-203ENST00000456860 NISCHQ9Y2I1 1504 aa27.08■■□□□ 1.93
GRAMD1B-203ENST00000456860 CCDC180Q9P1Z9 1646 aa23.53■■□□□ 1.36
GRAMD1B-203ENST00000456860 ZCCHC6Q5VYS8 1495 aaKnown RBP22.78■■□□□ 1.24
GRAMD1B-203ENST00000456860 SHROOM4Q9ULL8 1493 aa22.55■■□□□ 1.2
GRAMD1B-203ENST00000456860 DCAF1Q9Y4B6 1507 aa22.41■■□□□ 1.18
GRAMD1B-203ENST00000456860 DCAF8L2P0C7V8 631 aa22.33■■□□□ 1.16
GRAMD1B-203ENST00000456860 MYO15BQ96JP2 1530 aa22.09■■□□□ 1.13
GRAMD1B-203ENST00000456860 ABCC9O60706 1549 aa22.08■■□□□ 1.12
GRAMD1B-203ENST00000456860 SUPT5HO00267 1087 aaKnown RBP22.01■■□□□ 1.11
GRAMD1B-203ENST00000456860 NACADO15069 1562 aa21.89■■□□□ 1.1
GRAMD1B-203ENST00000456860 RB1CC1Q8TDY2 1594 aa21.65■■□□□ 1.06
GRAMD1B-203ENST00000456860 SCRIBQ14160 1630 aa21.64■■□□□ 1.05
GRAMD1B-203ENST00000456860 CHIC1Q5VXU3 224 aa21.26■□□□□ 0.99
GRAMD1B-203ENST00000456860 UNC13AQ9UPW8 1703 aa21.2■□□□□ 0.98
GRAMD1B-203ENST00000456860 RSF1Q96T23 1441 aaPredicted RBP21.08■□□□□ 0.97
GRAMD1B-203ENST00000456860 CECR2Q9BXF3 1484 aa21.01■□□□□ 0.95
GRAMD1B-203ENST00000456860 BICRAQ9NZM4 1560 aa20.97■□□□□ 0.95
GRAMD1B-203ENST00000456860 MROH2BQ7Z745 1585 aa20.91■□□□□ 0.94
GRAMD1B-203ENST00000456860 BAZ1AQ9NRL2 1556 aaPredicted RBP20.91■□□□□ 0.94
GRAMD1B-203ENST00000456860 PABPN1Q86U42 306 aaKnown RBP eCLIP20.86■□□□□ 0.93
GRAMD1B-203ENST00000456860 SMARCA4P51532 1647 aa20.77■□□□□ 0.92
GRAMD1B-203ENST00000456860 WIZO95785 1651 aa20.75■□□□□ 0.91
GRAMD1B-203ENST00000456860 LOC105371045A0A1W2PR82 267 aa20.6■□□□□ 0.89
GRAMD1B-203ENST00000456860 TOP2AP11388 1531 aaKnown RBP20.55■□□□□ 0.88
GRAMD1B-203ENST00000456860 TRIM41Q8WV44 630 aa20.54■□□□□ 0.88
GRAMD1B-203ENST00000456860 PEG3Q9GZU2 1588 aa20.53■□□□□ 0.88
GRAMD1B-203ENST00000456860 SMARCA2P51531 1590 aa20.41■□□□□ 0.86
GRAMD1B-203ENST00000456860 ATAD2BQ9ULI0 1458 aa20.4■□□□□ 0.86
GRAMD1B-203ENST00000456860 PCGF6Q9BYE7 350 aa20.35■□□□□ 0.85
GRAMD1B-203ENST00000456860 CCDC88BA6NC98 1476 aa20.35■□□□□ 0.85
GRAMD1B-203ENST00000456860 FAM9AQ8IZU1 332 aaPredicted RBP20.34■□□□□ 0.85
GRAMD1B-203ENST00000456860 EIF4G1Q04637 1599 aaKnown RBP20.34■□□□□ 0.85
GRAMD1B-203ENST00000456860 BAZ1BQ9UIG0 1483 aaKnown RBP20.29■□□□□ 0.84
GRAMD1B-203ENST00000456860 NCAPD3P42695 1498 aa20.21■□□□□ 0.83
GRAMD1B-203ENST00000456860 HMGXB3Q12766 1538 aa20.18■□□□□ 0.82
GRAMD1B-203ENST00000456860 HRCP23327 699 aa20.17■□□□□ 0.82
GRAMD1B-203ENST00000456860 EHMT2Q96KQ7 1210 aa20.17■□□□□ 0.82
GRAMD1B-203ENST00000456860 ABCC8Q09428 1581 aa20.04■□□□□ 0.8
GRAMD1B-203ENST00000456860 TRIM26Q12899 539 aaPredicted RBP20.03■□□□□ 0.8
GRAMD1B-203ENST00000456860 CC2D2AQ9P2K1 1620 aa19.99■□□□□ 0.79
GRAMD1B-203ENST00000456860 WRNQ14191 1432 aaPredicted RBP eCLIP19.84■□□□□ 0.77
GRAMD1B-203ENST00000456860 SOGA1O94964 1423 aa19.81■□□□□ 0.76
GRAMD1B-203ENST00000456860 CFTRP13569 1480 aa19.8■□□□□ 0.76
GRAMD1B-203ENST00000456860 PPARGC1BQ86YN6 1023 aaKnown RBP19.77■□□□□ 0.76
GRAMD1B-203ENST00000456860 SYNJ1O43426 1573 aa19.72■□□□□ 0.75
GRAMD1B-203ENST00000456860 CADPSQ9ULU8 1353 aa19.71■□□□□ 0.75
GRAMD1B-203ENST00000456860 EEA1Q15075 1411 aa19.71■□□□□ 0.75
GRAMD1B-203ENST00000456860 RUSC2Q8N2Y8 1516 aa19.7■□□□□ 0.74
GRAMD1B-203ENST00000456860 PRDM2Q13029 1718 aa19.7■□□□□ 0.74
GRAMD1B-203ENST00000456860 CSRNP3Q8WYN3 585 aa19.69■□□□□ 0.74
GRAMD1B-203ENST00000456860 TOP2BQ02880 1626 aa19.65■□□□□ 0.74
GRAMD1B-203ENST00000456860 BIVM-ERCC5R4GMW8 1640 aa19.62■□□□□ 0.73
GRAMD1B-203ENST00000456860 CEP162Q5TB80 1403 aa19.62■□□□□ 0.73
GRAMD1B-203ENST00000456860 UBTFP17480 764 aaKnown RBP19.61■□□□□ 0.73
GRAMD1B-203ENST00000456860 TNIKQ9UKE5 1360 aa19.6■□□□□ 0.73
GRAMD1B-203ENST00000456860 GOLGA3Q08378 1498 aa19.55■□□□□ 0.72
GRAMD1B-203ENST00000456860 CUX1P39880 1505 aa19.54■□□□□ 0.72
GRAMD1B-203ENST00000456860 ZEB1P37275 1124 aaPredicted RBP19.5■□□□□ 0.71
GRAMD1B-203ENST00000456860 DNAJC5BQ9UF47 199 aa19.49■□□□□ 0.71
GRAMD1B-203ENST00000456860 LAMC3Q9Y6N6 1575 aa19.48■□□□□ 0.71
GRAMD1B-203ENST00000456860 FANCD2Q9BXW9 1451 aa19.47■□□□□ 0.71
GRAMD1B-203ENST00000456860 CEP164Q9UPV0 1460 aa19.47■□□□□ 0.71
GRAMD1B-203ENST00000456860 TTBK1Q5TCY1 1321 aaPredicted RBP19.46■□□□□ 0.71
GRAMD1B-203ENST00000456860 NESP48681 1621 aa19.43■□□□□ 0.7
GRAMD1B-203ENST00000456860 KIF21BO75037 1637 aa19.42■□□□□ 0.7
GRAMD1B-203ENST00000456860 PDS5BQ9NTI5 1447 aa19.35■□□□□ 0.69
GRAMD1B-203ENST00000456860 RAPGEF2Q9Y4G8 1499 aa19.35■□□□□ 0.69
GRAMD1B-203ENST00000456860 KIF27Q86VH2 1401 aa19.34■□□□□ 0.69
GRAMD1B-203ENST00000456860 DNMBPQ6XZF7 1577 aa19.32■□□□□ 0.68
GRAMD1B-203ENST00000456860 CLIP1P30622 1438 aa19.32■□□□□ 0.68
GRAMD1B-203ENST00000456860 FGD5Q6ZNL6 1462 aa19.31■□□□□ 0.68
GRAMD1B-203ENST00000456860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.28■□□□□ 0.68
GRAMD1B-203ENST00000456860 TOPBP1Q92547 1522 aa19.28■□□□□ 0.68
GRAMD1B-203ENST00000456860 RANGAP1P46060 587 aaPredicted RBP19.27■□□□□ 0.67
GRAMD1B-203ENST00000456860 CCER1Q8TC90 406 aaPredicted RBP19.24■□□□□ 0.67
GRAMD1B-203ENST00000456860 PRXQ9BXM0 1461 aa19.24■□□□□ 0.67
GRAMD1B-203ENST00000456860 ERICH3Q5RHP9 1530 aa19.23■□□□□ 0.67
GRAMD1B-203ENST00000456860 CUX2O14529 1486 aa19.23■□□□□ 0.67
GRAMD1B-203ENST00000456860 URB2Q14146 1524 aaKnown RBP19.2■□□□□ 0.66
GRAMD1B-203ENST00000456860 POLA1P09884 1462 aaPredicted RBP19.2■□□□□ 0.66
GRAMD1B-203ENST00000456860 VPS8Q8N3P4 1428 aa19.2■□□□□ 0.66
GRAMD1B-203ENST00000456860 KIF21AQ7Z4S6 1674 aa19.2■□□□□ 0.66
GRAMD1B-203ENST00000456860 ABCA10Q8WWZ4 1543 aa19.16■□□□□ 0.66
GRAMD1B-203ENST00000456860 IGF1RP08069 1367 aa19.14■□□□□ 0.65
GRAMD1B-203ENST00000456860 APLP2Q06481 763 aa19.14■□□□□ 0.65
GRAMD1B-203ENST00000456860 RAD54L2Q9Y4B4 1467 aa19.12■□□□□ 0.65
GRAMD1B-203ENST00000456860 MRC2Q9UBG0 1479 aa19.06■□□□□ 0.64
GRAMD1B-203ENST00000456860 CARMIL1Q5VZK9 1371 aa19.05■□□□□ 0.64
GRAMD1B-203ENST00000456860 WDR97A6NE52 1622 aa19.05■□□□□ 0.64
GRAMD1B-203ENST00000456860 ARAP1Q96P48 1450 aa19.02■□□□□ 0.63
GRAMD1B-203ENST00000456860 HNRNPUL2Q1KMD3 747 aaKnown RBP19.01■□□□□ 0.63
GRAMD1B-203ENST00000456860 CUL7Q14999 1698 aa18.97■□□□□ 0.63
GRAMD1B-203ENST00000456860 TARBP1Q13395 1621 aaKnown RBP18.97■□□□□ 0.63
GRAMD1B-203ENST00000456860 ABCA5Q8WWZ7 1642 aa18.97■□□□□ 0.63
GRAMD1B-203ENST00000456860 WDR62O43379 1518 aa18.95■□□□□ 0.62
GRAMD1B-203ENST00000456860 GAPVD1Q14C86 1478 aa18.94■□□□□ 0.62
GRAMD1B-203ENST00000456860 TDRD9Q8NDG6 1382 aaKnown RBP18.94■□□□□ 0.62
GRAMD1B-203ENST00000456860 ERCC6Q03468 1493 aa18.94■□□□□ 0.62
GRAMD1B-203ENST00000456860 ARHGAP35Q9NRY4 1499 aa18.9■□□□□ 0.62
GRAMD1B-203ENST00000456860 KANK4Q5T7N3 995 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 233.8 ms