RNA–Protein interactions for RNA: ENST00000302851.7

ZNF561-201, Transcript of zinc finger protein 561, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF561, Length 4,693 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-201ENST00000302851 NISCHQ9Y2I1 1504 aa19.47■□□□□ 0.71
ZNF561-201ENST00000302851 DCAF8L2P0C7V8 631 aa18.39■□□□□ 0.53
ZNF561-201ENST00000302851 ABCC9O60706 1549 aa16.9■□□□□ 0.3
ZNF561-201ENST00000302851 SHROOM4Q9ULL8 1493 aa16.86■□□□□ 0.29
ZNF561-201ENST00000302851 CCDC180Q9P1Z9 1646 aa16.75■□□□□ 0.27
ZNF561-201ENST00000302851 SUPT5HO00267 1087 aaKnown RBP16.73■□□□□ 0.27
ZNF561-201ENST00000302851 FAM9AQ8IZU1 332 aaPredicted RBP16.48■□□□□ 0.23
ZNF561-201ENST00000302851 RB1CC1Q8TDY2 1594 aa16.27■□□□□ 0.19
ZNF561-201ENST00000302851 PABPN1Q86U42 306 aaKnown RBP eCLIP16.26■□□□□ 0.19
ZNF561-201ENST00000302851 NACADO15069 1562 aa16.17■□□□□ 0.18
ZNF561-201ENST00000302851 ZCCHC6Q5VYS8 1495 aaKnown RBP16.1■□□□□ 0.17
ZNF561-201ENST00000302851 SCRIBQ14160 1630 aa15.91■□□□□ 0.14
ZNF561-201ENST00000302851 APLP2Q06481 763 aa15.91■□□□□ 0.14
ZNF561-201ENST00000302851 DCAF1Q9Y4B6 1507 aa15.88■□□□□ 0.13
ZNF561-201ENST00000302851 TRIM41Q8WV44 630 aa15.86■□□□□ 0.13
ZNF561-201ENST00000302851 MYO15BQ96JP2 1530 aa15.77■□□□□ 0.11
ZNF561-201ENST00000302851 UBTFP17480 764 aaKnown RBP15.56■□□□□ 0.08
ZNF561-201ENST00000302851 EHMT2Q96KQ7 1210 aa15.53■□□□□ 0.08
ZNF561-201ENST00000302851 ATP1B4Q9UN42 357 aaPredicted RBP15.44■□□□□ 0.06
ZNF561-201ENST00000302851 BAZ1AQ9NRL2 1556 aaPredicted RBP15.38■□□□□ 0.05
ZNF561-201ENST00000302851 BAZ1BQ9UIG0 1483 aaKnown RBP15.38■□□□□ 0.05
ZNF561-201ENST00000302851 RANGAP1P46060 587 aaPredicted RBP15.35■□□□□ 0.05
ZNF561-201ENST00000302851 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.29■□□□□ 0.04
ZNF561-201ENST00000302851 FBLN2P98095 1184 aa15.29■□□□□ 0.04
ZNF561-201ENST00000302851 HNRNPUL2Q1KMD3 747 aaKnown RBP15.29■□□□□ 0.04
ZNF561-201ENST00000302851 SMARCA2P51531 1590 aa15.27■□□□□ 0.03
ZNF561-201ENST00000302851 ERCC6Q03468 1493 aa15.25■□□□□ 0.03
ZNF561-201ENST00000302851 CECR2Q9BXF3 1484 aa15.15■□□□□ 0.02
ZNF561-201ENST00000302851 TTBK1Q5TCY1 1321 aaPredicted RBP15.14■□□□□ 0.01
ZNF561-201ENST00000302851 MYT1LQ9UL68 1186 aa15.14■□□□□ 0.01
ZNF561-201ENST00000302851 RSF1Q96T23 1441 aaPredicted RBP15.14■□□□□ 0.01
ZNF561-201ENST00000302851 PDS5BQ9NTI5 1447 aa15.13■□□□□ 0.01
ZNF561-201ENST00000302851 NPM1P06748 294 aaKnown RBP eCLIP15.11■□□□□ 0.01
ZNF561-201ENST00000302851 CHIC1Q5VXU3 224 aa15.1■□□□□ 0.01
ZNF561-201ENST00000302851 CHMP7Q8WUX9 453 aaPredicted RBP15.04■□□□□ -0
ZNF561-201ENST00000302851 CDK11AQ9UQ88 783 aaPredicted RBP15□□□□□ -0.01
ZNF561-201ENST00000302851 CSRNP3Q8WYN3 585 aa14.99□□□□□ -0.01
ZNF561-201ENST00000302851 ATAD2BQ9ULI0 1458 aa14.93□□□□□ -0.02
ZNF561-201ENST00000302851 CADPSQ9ULU8 1353 aa14.9□□□□□ -0.02
ZNF561-201ENST00000302851 EEA1Q15075 1411 aa14.86□□□□□ -0.03
ZNF561-201ENST00000302851 MROH2BQ7Z745 1585 aa14.86□□□□□ -0.03
ZNF561-201ENST00000302851 WRNQ14191 1432 aaPredicted RBP eCLIP14.86□□□□□ -0.03
ZNF561-201ENST00000302851 NCAPD3P42695 1498 aa14.85□□□□□ -0.03
ZNF561-201ENST00000302851 SMARCA4P51532 1647 aa14.85□□□□□ -0.03
ZNF561-201ENST00000302851 EIF4G1Q04637 1599 aaKnown RBP14.85□□□□□ -0.03
ZNF561-201ENST00000302851 ABCC8Q09428 1581 aa14.83□□□□□ -0.04
ZNF561-201ENST00000302851 KIF27Q86VH2 1401 aa14.82□□□□□ -0.04
ZNF561-201ENST00000302851 TOP2AP11388 1531 aaKnown RBP14.81□□□□□ -0.04
ZNF561-201ENST00000302851 CEP164Q9UPV0 1460 aa14.76□□□□□ -0.05
ZNF561-201ENST00000302851 CCDC88BA6NC98 1476 aa14.71□□□□□ -0.05
ZNF561-201ENST00000302851 ESF1Q9H501 851 aaKnown RBP14.69□□□□□ -0.06
ZNF561-201ENST00000302851 CC2D2AQ9P2K1 1620 aa14.65□□□□□ -0.06
ZNF561-201ENST00000302851 SOGA1O94964 1423 aa14.65□□□□□ -0.06
ZNF561-201ENST00000302851 P3H3Q8IVL6 736 aa14.65□□□□□ -0.06
ZNF561-201ENST00000302851 HMGXB3Q12766 1538 aa14.64□□□□□ -0.07
ZNF561-201ENST00000302851 ZEB1P37275 1124 aaPredicted RBP14.64□□□□□ -0.07
ZNF561-201ENST00000302851 FANCD2Q9BXW9 1451 aa14.63□□□□□ -0.07
ZNF561-201ENST00000302851 LOC105371045A0A1W2PR82 267 aa14.61□□□□□ -0.07
ZNF561-201ENST00000302851 FAM50AQ14320 339 aaKnown RBP14.59□□□□□ -0.07
ZNF561-201ENST00000302851 ITGAEP38570 1179 aa14.59□□□□□ -0.07
ZNF561-201ENST00000302851 CUX2O14529 1486 aa14.59□□□□□ -0.07
ZNF561-201ENST00000302851 CCER1Q8TC90 406 aaPredicted RBP14.58□□□□□ -0.07
ZNF561-201ENST00000302851 WIZO95785 1651 aa14.58□□□□□ -0.08
ZNF561-201ENST00000302851 PCGF6Q9BYE7 350 aa14.58□□□□□ -0.08
ZNF561-201ENST00000302851 PLEKHD1A6NEE1 506 aa14.57□□□□□ -0.08
ZNF561-201ENST00000302851 CARMIL2Q6F5E8 1435 aa14.57□□□□□ -0.08
ZNF561-201ENST00000302851 BICRAQ9NZM4 1560 aa14.56□□□□□ -0.08
ZNF561-201ENST00000302851 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
ZNF561-201ENST00000302851 CARMIL1Q5VZK9 1371 aa14.53□□□□□ -0.08
ZNF561-201ENST00000302851 TRIM26Q12899 539 aaPredicted RBP14.51□□□□□ -0.09
ZNF561-201ENST00000302851 GOLGA3Q08378 1498 aa14.51□□□□□ -0.09
ZNF561-201ENST00000302851 ACIN1Q9UKV3 1341 aaKnown RBP14.5□□□□□ -0.09
ZNF561-201ENST00000302851 ZNF777Q9ULD5 760 aaPredicted RBP14.48□□□□□ -0.09
ZNF561-201ENST00000302851 ARID3CA6NKF2 412 aa14.48□□□□□ -0.09
ZNF561-201ENST00000302851 TRIM52Q96A61 297 aa14.46□□□□□ -0.09
ZNF561-201ENST00000302851 TDRD9Q8NDG6 1382 aaKnown RBP14.46□□□□□ -0.09
ZNF561-201ENST00000302851 TSPY4P0CV99 314 aa14.45□□□□□ -0.1
ZNF561-201ENST00000302851 TSPY10P0CW01 314 aa14.45□□□□□ -0.1
ZNF561-201ENST00000302851 MRC2Q9UBG0 1479 aa14.45□□□□□ -0.1
ZNF561-201ENST00000302851 MTUS2Q5JR59 1369 aa14.45□□□□□ -0.1
ZNF561-201ENST00000302851 TRHP20396 242 aaPredicted RBP14.44□□□□□ -0.1
ZNF561-201ENST00000302851 PPARGC1BQ86YN6 1023 aaKnown RBP14.42□□□□□ -0.1
ZNF561-201ENST00000302851 CFTRP13569 1480 aa14.41□□□□□ -0.1
ZNF561-201ENST00000302851 CLIP1P30622 1438 aa14.41□□□□□ -0.1
ZNF561-201ENST00000302851 LAMC3Q9Y6N6 1575 aa14.41□□□□□ -0.1
ZNF561-201ENST00000302851 FHAD1B1AJZ9 1412 aa14.38□□□□□ -0.11
ZNF561-201ENST00000302851 DNAJC5BQ9UF47 199 aa14.38□□□□□ -0.11
ZNF561-201ENST00000302851 KCNH8Q96L42 1107 aa14.37□□□□□ -0.11
ZNF561-201ENST00000302851 IFT140Q96RY7 1462 aa14.36□□□□□ -0.11
ZNF561-201ENST00000302851 STAG3Q9UJ98 1225 aa14.33□□□□□ -0.12
ZNF561-201ENST00000302851 TNIKQ9UKE5 1360 aa14.32□□□□□ -0.12
ZNF561-201ENST00000302851 BCANQ96GW7 911 aa14.31□□□□□ -0.12
ZNF561-201ENST00000302851 JPH4Q96JJ6 628 aa14.3□□□□□ -0.12
ZNF561-201ENST00000302851 GAPVD1Q14C86 1478 aa14.3□□□□□ -0.12
ZNF561-201ENST00000302851 RAPGEF2Q9Y4G8 1499 aa14.29□□□□□ -0.12
ZNF561-201ENST00000302851 UNC13AQ9UPW8 1703 aa14.28□□□□□ -0.12
ZNF561-201ENST00000302851 PEG3Q9GZU2 1588 aa14.28□□□□□ -0.12
ZNF561-201ENST00000302851 GRIN2BQ13224 1484 aa14.27□□□□□ -0.13
ZNF561-201ENST00000302851 FGD5Q6ZNL6 1462 aa14.27□□□□□ -0.13
ZNF561-201ENST00000302851 FMN1Q68DA7 1419 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms