RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 NISCHQ9Y2I1 1504 aa27.77■■■□□ 2.04
MRPL55-203ENST00000336520 CCDC180Q9P1Z9 1646 aa24.76■■□□□ 1.55
MRPL55-203ENST00000336520 ABCC9O60706 1549 aa24.43■■□□□ 1.5
MRPL55-203ENST00000336520 RB1CC1Q8TDY2 1594 aa23.41■■□□□ 1.34
MRPL55-203ENST00000336520 DCAF8L2P0C7V8 631 aa23.34■■□□□ 1.33
MRPL55-203ENST00000336520 NACADO15069 1562 aa23.33■■□□□ 1.33
MRPL55-203ENST00000336520 MYO15BQ96JP2 1530 aa23.1■■□□□ 1.29
MRPL55-203ENST00000336520 ZCCHC6Q5VYS8 1495 aaKnown RBP23.09■■□□□ 1.29
MRPL55-203ENST00000336520 DCAF1Q9Y4B6 1507 aa22.94■■□□□ 1.26
MRPL55-203ENST00000336520 UNC13AQ9UPW8 1703 aa22.84■■□□□ 1.25
MRPL55-203ENST00000336520 PABPN1Q86U42 306 aaKnown RBP eCLIP22.8■■□□□ 1.24
MRPL55-203ENST00000336520 BICRAQ9NZM4 1560 aa22.67■■□□□ 1.22
MRPL55-203ENST00000336520 SCRIBQ14160 1630 aa22.61■■□□□ 1.21
MRPL55-203ENST00000336520 DNAJC5BQ9UF47 199 aa22.53■■□□□ 1.2
MRPL55-203ENST00000336520 SHROOM4Q9ULL8 1493 aa22.43■■□□□ 1.18
MRPL55-203ENST00000336520 EIF4G1Q04637 1599 aaKnown RBP22.11■■□□□ 1.13
MRPL55-203ENST00000336520 CC2D2AQ9P2K1 1620 aa22.06■■□□□ 1.12
MRPL55-203ENST00000336520 CECR2Q9BXF3 1484 aa21.96■■□□□ 1.11
MRPL55-203ENST00000336520 SMARCA4P51532 1647 aa21.59■■□□□ 1.05
MRPL55-203ENST00000336520 BAZ1AQ9NRL2 1556 aaPredicted RBP21.54■■□□□ 1.04
MRPL55-203ENST00000336520 NCAPD3P42695 1498 aa21.52■■□□□ 1.03
MRPL55-203ENST00000336520 ATAD2BQ9ULI0 1458 aa21.51■■□□□ 1.03
MRPL55-203ENST00000336520 SMARCA2P51531 1590 aa21.49■■□□□ 1.03
MRPL55-203ENST00000336520 HMGXB3Q12766 1538 aa21.4■■□□□ 1.02
MRPL55-203ENST00000336520 MROH2BQ7Z745 1585 aa21.4■■□□□ 1.02
MRPL55-203ENST00000336520 BAZ1BQ9UIG0 1483 aaKnown RBP21.35■■□□□ 1.01
MRPL55-203ENST00000336520 PEG3Q9GZU2 1588 aa21.35■■□□□ 1.01
MRPL55-203ENST00000336520 WIZO95785 1651 aa21.16■□□□□ 0.98
MRPL55-203ENST00000336520 ERCC6Q03468 1493 aa21.1■□□□□ 0.97
MRPL55-203ENST00000336520 RSF1Q96T23 1441 aaPredicted RBP21.09■□□□□ 0.97
MRPL55-203ENST00000336520 NESP48681 1621 aa21.07■□□□□ 0.96
MRPL55-203ENST00000336520 LAMC3Q9Y6N6 1575 aa20.99■□□□□ 0.95
MRPL55-203ENST00000336520 TOP2AP11388 1531 aaKnown RBP20.94■□□□□ 0.94
MRPL55-203ENST00000336520 CUX2O14529 1486 aa20.89■□□□□ 0.94
MRPL55-203ENST00000336520 CADPSQ9ULU8 1353 aa20.89■□□□□ 0.93
MRPL55-203ENST00000336520 PDS5BQ9NTI5 1447 aa20.87■□□□□ 0.93
MRPL55-203ENST00000336520 KIF21AQ7Z4S6 1674 aa20.81■□□□□ 0.92
MRPL55-203ENST00000336520 THOC2Q8NI27 1593 aaKnown RBP20.77■□□□□ 0.92
MRPL55-203ENST00000336520 CFTRP13569 1480 aa20.72■□□□□ 0.91
MRPL55-203ENST00000336520 CCDC88BA6NC98 1476 aa20.69■□□□□ 0.9
MRPL55-203ENST00000336520 FANCD2Q9BXW9 1451 aa20.67■□□□□ 0.9
MRPL55-203ENST00000336520 MRC2Q9UBG0 1479 aa20.67■□□□□ 0.9
MRPL55-203ENST00000336520 CEP164Q9UPV0 1460 aa20.67■□□□□ 0.9
MRPL55-203ENST00000336520 WDR62O43379 1518 aa20.58■□□□□ 0.89
MRPL55-203ENST00000336520 PRDM2Q13029 1718 aa20.55■□□□□ 0.88
MRPL55-203ENST00000336520 SUPT5HO00267 1087 aaKnown RBP20.49■□□□□ 0.87
MRPL55-203ENST00000336520 URB2Q14146 1524 aaKnown RBP20.46■□□□□ 0.87
MRPL55-203ENST00000336520 DNAJC5Q9H3Z4 198 aa20.44■□□□□ 0.86
MRPL55-203ENST00000336520 TOPBP1Q92547 1522 aa20.32■□□□□ 0.84
MRPL55-203ENST00000336520 ABCC8Q09428 1581 aa20.3■□□□□ 0.84
MRPL55-203ENST00000336520 DNMBPQ6XZF7 1577 aa20.28■□□□□ 0.84
MRPL55-203ENST00000336520 IFT140Q96RY7 1462 aa20.24■□□□□ 0.83
MRPL55-203ENST00000336520 ZNF608Q9ULD9 1512 aaPredicted RBP20.15■□□□□ 0.82
MRPL55-203ENST00000336520 POLA1P09884 1462 aaPredicted RBP20.12■□□□□ 0.81
MRPL55-203ENST00000336520 CUX1P39880 1505 aa20.09■□□□□ 0.81
MRPL55-203ENST00000336520 TARBP1Q13395 1621 aaKnown RBP20.09■□□□□ 0.81
MRPL55-203ENST00000336520 EIF4G3O43432 1585 aaKnown RBP20.07■□□□□ 0.8
MRPL55-203ENST00000336520 FGD5Q6ZNL6 1462 aa20.06■□□□□ 0.8
MRPL55-203ENST00000336520 SOGA1O94964 1423 aa20.05■□□□□ 0.8
MRPL55-203ENST00000336520 RAD54L2Q9Y4B4 1467 aa20.05■□□□□ 0.8
MRPL55-203ENST00000336520 AQRO60306 1485 aaKnown RBP eCLIP20.02■□□□□ 0.88e-7■■■■■ 27.9
MRPL55-203ENST00000336520 OSCARQ8IYS5 282 aa20.01■□□□□ 0.79
MRPL55-203ENST00000336520 TDRD9Q8NDG6 1382 aaKnown RBP19.96■□□□□ 0.79
MRPL55-203ENST00000336520 WDR97A6NE52 1622 aa19.92■□□□□ 0.78
MRPL55-203ENST00000336520 WRNQ14191 1432 aaPredicted RBP eCLIP19.92■□□□□ 0.78
MRPL55-203ENST00000336520 TOP2BQ02880 1626 aa19.87■□□□□ 0.77
MRPL55-203ENST00000336520 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
MRPL55-203ENST00000336520 FBLN2P98095 1184 aa19.86■□□□□ 0.77
MRPL55-203ENST00000336520 BIVM-ERCC5R4GMW8 1640 aa19.86■□□□□ 0.77
MRPL55-203ENST00000336520 ABCA10Q8WWZ4 1543 aa19.85■□□□□ 0.77
MRPL55-203ENST00000336520 CHD1O14646 1710 aa19.85■□□□□ 0.77
MRPL55-203ENST00000336520 GRIN2BQ13224 1484 aa19.84■□□□□ 0.77
MRPL55-203ENST00000336520 SNAPC4Q5SXM2 1469 aa19.84■□□□□ 0.77
MRPL55-203ENST00000336520 GAPVD1Q14C86 1478 aa19.82■□□□□ 0.76
MRPL55-203ENST00000336520 MAGI1Q96QZ7 1491 aaPredicted RBP19.8■□□□□ 0.76
MRPL55-203ENST00000336520 ABCA5Q8WWZ7 1642 aa19.78■□□□□ 0.76
MRPL55-203ENST00000336520 PBRM1Q86U86 1689 aa19.78■□□□□ 0.76
MRPL55-203ENST00000336520 CHMP7Q8WUX9 453 aaPredicted RBP19.76■□□□□ 0.75
MRPL55-203ENST00000336520 TRIM41Q8WV44 630 aa19.76■□□□□ 0.75
MRPL55-203ENST00000336520 SYNJ2O15056 1496 aa19.73■□□□□ 0.75
MRPL55-203ENST00000336520 RIMBP3CA6NJZ7 1639 aa19.69■□□□□ 0.74
MRPL55-203ENST00000336520 RIMBP3BA6NNM3 1639 aa19.69■□□□□ 0.74
MRPL55-203ENST00000336520 RIMBP3Q9UFD9 1639 aa19.69■□□□□ 0.74
MRPL55-203ENST00000336520 ARHGEF11O15085 1522 aa19.68■□□□□ 0.74
MRPL55-203ENST00000336520 ADAMTS12P58397 1594 aa19.62■□□□□ 0.73
MRPL55-203ENST00000336520 CLASP1Q7Z460 1538 aa19.61■□□□□ 0.73
MRPL55-203ENST00000336520 ERICH3Q5RHP9 1530 aa19.61■□□□□ 0.73
MRPL55-203ENST00000336520 GRIN2AQ12879 1464 aa19.58■□□□□ 0.72
MRPL55-203ENST00000336520 FHAD1B1AJZ9 1412 aa19.58■□□□□ 0.72
MRPL55-203ENST00000336520 KIF27Q86VH2 1401 aa19.52■□□□□ 0.72
MRPL55-203ENST00000336520 CYB5RLQ6IPT4 315 aa19.52■□□□□ 0.72
MRPL55-203ENST00000336520 ARAP1Q96P48 1450 aa19.5■□□□□ 0.71
MRPL55-203ENST00000336520 NUP160Q12769 1436 aa19.48■□□□□ 0.71
MRPL55-203ENST00000336520 CEP170Q5SW79 1584 aa19.48■□□□□ 0.71
MRPL55-203ENST00000336520 IGF1RP08069 1367 aa19.43■□□□□ 0.7
MRPL55-203ENST00000336520 CUL7Q14999 1698 aa19.4■□□□□ 0.7
MRPL55-203ENST00000336520 SHROOM2Q13796 1616 aa19.35■□□□□ 0.69
MRPL55-203ENST00000336520 ERCC6L2Q5T890 1561 aa19.34■□□□□ 0.69
MRPL55-203ENST00000336520 CARMIL1Q5VZK9 1371 aa19.33■□□□□ 0.69
MRPL55-203ENST00000336520 RUSC2Q8N2Y8 1516 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms