RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 DCAF8L2P0C7V8 631 aa22.81■■□□□ 1.24
TARDBP-201ENST00000240185 PELP1Q8IZL8 1130 aaKnown RBP22.7■■□□□ 1.22
TARDBP-201ENST00000240185 SUPT5HO00267 1087 aaKnown RBP22.1■■□□□ 1.13
TARDBP-201ENST00000240185 ERICH6Q7L0X2 663 aa21.86■■□□□ 1.09
TARDBP-201ENST00000240185 MYT1Q01538 1121 aa21.76■■□□□ 1.07
TARDBP-201ENST00000240185 EHMT2Q96KQ7 1210 aa21.72■■□□□ 1.07
TARDBP-201ENST00000240185 CCER1Q8TC90 406 aaPredicted RBP21.64■■□□□ 1.05
TARDBP-201ENST00000240185 CENPBP07199 599 aaPredicted RBP21.61■■□□□ 1.05
TARDBP-201ENST00000240185 NISCHQ9Y2I1 1504 aa21.52■■□□□ 1.04
TARDBP-201ENST00000240185 APLP2Q06481 763 aa21.4■■□□□ 1.02
TARDBP-201ENST00000240185 PCGF6Q9BYE7 350 aa21.38■■□□□ 1.01
TARDBP-201ENST00000240185 SHROOM4Q9ULL8 1493 aa21.23■□□□□ 0.99
TARDBP-201ENST00000240185 ZEB1P37275 1124 aaPredicted RBP21.15■□□□□ 0.98
TARDBP-201ENST00000240185 TTBK1Q5TCY1 1321 aaPredicted RBP21.12■□□□□ 0.97
TARDBP-201ENST00000240185 NEFLP07196 543 aa21.1■□□□□ 0.97
TARDBP-201ENST00000240185 YTHDC1Q96MU7 727 aaKnown RBP20.98■□□□□ 0.95
TARDBP-201ENST00000240185 FAM9AQ8IZU1 332 aaPredicted RBP20.97■□□□□ 0.95
TARDBP-201ENST00000240185 DAXXQ9UER7 740 aaPredicted RBP20.66■□□□□ 0.9
TARDBP-201ENST00000240185 RANGAP1P46060 587 aaPredicted RBP20.55■□□□□ 0.88
TARDBP-201ENST00000240185 ATP1B4Q9UN42 357 aaPredicted RBP20.39■□□□□ 0.85
TARDBP-201ENST00000240185 RTL5Q5HYW3 569 aaPredicted RBP20.36■□□□□ 0.85
TARDBP-201ENST00000240185 TRIM41Q8WV44 630 aa20.34■□□□□ 0.85
TARDBP-201ENST00000240185 HRCP23327 699 aa20.33■□□□□ 0.85
TARDBP-201ENST00000240185 UBTFP17480 764 aaKnown RBP20.23■□□□□ 0.83
TARDBP-201ENST00000240185 TRIM26Q12899 539 aaPredicted RBP20.18■□□□□ 0.82
TARDBP-201ENST00000240185 PPARGC1BQ86YN6 1023 aaKnown RBP20.17■□□□□ 0.82
TARDBP-201ENST00000240185 ZNF316A6NFI3 1004 aaPredicted RBP20.14■□□□□ 0.81
TARDBP-201ENST00000240185 POLR3GLQ9BT43 218 aa20.04■□□□□ 0.8
TARDBP-201ENST00000240185 CLSPNQ9HAW4 1339 aa19.97■□□□□ 0.79
TARDBP-201ENST00000240185 CNGB1Q14028 1251 aaPredicted RBP19.93■□□□□ 0.78
TARDBP-201ENST00000240185 DIEXFQ68CQ4 756 aaKnown RBP19.86■□□□□ 0.77
TARDBP-201ENST00000240185 ITGAEP38570 1179 aa19.84■□□□□ 0.77
TARDBP-201ENST00000240185 GTF3C3Q9Y5Q9 886 aa19.8■□□□□ 0.76
TARDBP-201ENST00000240185 BCANQ96GW7 911 aa19.77■□□□□ 0.76
TARDBP-201ENST00000240185 HNRNPUL2Q1KMD3 747 aaKnown RBP19.74■□□□□ 0.75
TARDBP-201ENST00000240185 CDK11AQ9UQ88 783 aaPredicted RBP19.68■□□□□ 0.74
TARDBP-201ENST00000240185 EIF5BO60841 1220 aaKnown RBP19.67■□□□□ 0.74
TARDBP-201ENST00000240185 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.61■□□□□ 0.73
TARDBP-201ENST00000240185 LOC105371045A0A1W2PR82 267 aa19.55■□□□□ 0.72
TARDBP-201ENST00000240185 SLC4A1APQ9BWU0 796 aaKnown RBP19.54■□□□□ 0.72
TARDBP-201ENST00000240185 MYT1LQ9UL68 1186 aa19.53■□□□□ 0.72
TARDBP-201ENST00000240185 GLIPR1L2Q4G1C9 344 aa19.47■□□□□ 0.71
TARDBP-201ENST00000240185 ANP32AP39687 249 aaKnown RBP19.42■□□□□ 0.7
TARDBP-201ENST00000240185 ZBTB47Q9UFB7 747 aaPredicted RBP19.38■□□□□ 0.69
TARDBP-201ENST00000240185 ACIN1Q9UKV3 1341 aaKnown RBP19.37■□□□□ 0.69
TARDBP-201ENST00000240185 ANP32CO43423 234 aa19.34■□□□□ 0.69
TARDBP-201ENST00000240185 CHIC1Q5VXU3 224 aa19.28■□□□□ 0.68
TARDBP-201ENST00000240185 NPM2Q86SE8 214 aaKnown RBP19.27■□□□□ 0.68
TARDBP-201ENST00000240185 ANP32BQ92688 251 aaKnown RBP19.26■□□□□ 0.67
TARDBP-201ENST00000240185 NEUROD1Q13562 356 aa19.23■□□□□ 0.67
TARDBP-201ENST00000240185 BCL11AQ9H165 835 aa19.22■□□□□ 0.67
TARDBP-201ENST00000240185 CANXP27824 592 aaKnown RBP19.2■□□□□ 0.66
TARDBP-201ENST00000240185 FAM50AQ14320 339 aaKnown RBP19.14■□□□□ 0.65
TARDBP-201ENST00000240185 TRIM52Q96A61 297 aa19.13■□□□□ 0.65
TARDBP-201ENST00000240185 FKBP8Q14318 412 aa19.06■□□□□ 0.64
TARDBP-201ENST00000240185 ZNF326Q5BKZ1 582 aaKnown RBP19.05■□□□□ 0.64
TARDBP-201ENST00000240185 NBR1Q14596 966 aa19.04■□□□□ 0.64
TARDBP-201ENST00000240185 HSP90AA1P07900 732 aaKnown RBP19.03■□□□□ 0.64
TARDBP-201ENST00000240185 SLC24A1O60721 1099 aa18.94■□□□□ 0.62
TARDBP-201ENST00000240185 ARXQ96QS3 562 aa18.93■□□□□ 0.62
TARDBP-201ENST00000240185 UPF2Q9HAU5 1272 aaKnown RBP18.93■□□□□ 0.62
TARDBP-201ENST00000240185 NEFMP07197 916 aa18.89■□□□□ 0.61
TARDBP-201ENST00000240185 HNRNPUQ00839 825 aaKnown RBP eCLIP18.78■□□□□ 0.6
TARDBP-201ENST00000240185 CCDC136Q96JN2 1154 aa18.76■□□□□ 0.59
TARDBP-201ENST00000240185 TNNT2P45379 298 aaPredicted RBP18.73■□□□□ 0.59
TARDBP-201ENST00000240185 SCAF1Q9H7N4 1312 aaKnown RBP18.71■□□□□ 0.59
TARDBP-201ENST00000240185 TRIM44Q96DX7 344 aaPredicted RBP18.67■□□□□ 0.58
TARDBP-201ENST00000240185 FAM9BQ8IZU0 186 aa18.66■□□□□ 0.58
TARDBP-201ENST00000240185 ANP32EQ9BTT0 268 aa18.64■□□□□ 0.57
TARDBP-201ENST00000240185 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.62■□□□□ 0.57
TARDBP-201ENST00000240185 SALL2Q9Y467 1007 aaPredicted RBP18.6■□□□□ 0.57
TARDBP-201ENST00000240185 DDX10Q13206 875 aaKnown RBP18.59■□□□□ 0.57
TARDBP-201ENST00000240185 ERICH6BQ5W0A0 696 aa18.55■□□□□ 0.56
TARDBP-201ENST00000240185 IRX6P78412 446 aaPredicted RBP18.53■□□□□ 0.56
TARDBP-201ENST00000240185 RTN4Q9NQC3 1192 aaKnown RBP18.52■□□□□ 0.56
TARDBP-201ENST00000240185 DDRGK1Q96HY6 314 aa18.5■□□□□ 0.55
TARDBP-201ENST00000240185 NAP1L5Q96NT1 182 aaPredicted RBP18.49■□□□□ 0.55
TARDBP-201ENST00000240185 CDK11BP21127 795 aaKnown RBP18.49■□□□□ 0.55
TARDBP-201ENST00000240185 BECN1Q14457 450 aa18.47■□□□□ 0.55
TARDBP-201ENST00000240185 TMC1Q8TDI8 760 aa18.46■□□□□ 0.55
TARDBP-201ENST00000240185 TONSLQ96HA7 1378 aa18.45■□□□□ 0.54
TARDBP-201ENST00000240185 DNTTIP2Q5QJE6 756 aaKnown RBP18.44■□□□□ 0.54
TARDBP-201ENST00000240185 GOLGA6L22H0YM25 854 aa18.43■□□□□ 0.54
TARDBP-201ENST00000240185 NCLP19338 710 aaKnown RBP18.43■□□□□ 0.54
TARDBP-201ENST00000240185 PTMAP06454 111 aaKnown RBP18.43■□□□□ 0.54
TARDBP-201ENST00000240185 MRS2Q9HD23 443 aa18.4■□□□□ 0.54
TARDBP-201ENST00000240185 MIER1Q8N108 512 aa18.39■□□□□ 0.53
TARDBP-201ENST00000240185 PPM1GO15355 546 aaPredicted RBP18.38■□□□□ 0.53
TARDBP-201ENST00000240185 WDR43Q15061 677 aaKnown RBP eCLIP18.33■□□□□ 0.52
TARDBP-201ENST00000240185 MYH16Q9H6N6 1097 aa18.31■□□□□ 0.52
TARDBP-201ENST00000240185 LAS1LQ9Y4W2 734 aaKnown RBP18.28■□□□□ 0.52
TARDBP-201ENST00000240185 P3H3Q8IVL6 736 aa18.27■□□□□ 0.52
TARDBP-201ENST00000240185 ZNF777Q9ULD5 760 aaPredicted RBP18.27■□□□□ 0.51
TARDBP-201ENST00000240185 ARID3CA6NKF2 412 aa18.26■□□□□ 0.51
TARDBP-201ENST00000240185 AMER1Q5JTC6 1135 aaPredicted RBP18.26■□□□□ 0.51
TARDBP-201ENST00000240185 ZRSR1Q15695 479 aaKnown RBP18.24■□□□□ 0.51
TARDBP-201ENST00000240185 NOP58Q9Y2X3 529 aaKnown RBP18.22■□□□□ 0.51
TARDBP-201ENST00000240185 CCDC180Q9P1Z9 1646 aa18.21■□□□□ 0.51
TARDBP-201ENST00000240185 TPRNQ4KMQ1 711 aa18.18■□□□□ 0.5
TARDBP-201ENST00000240185 CHGAP10645 457 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms