RNA–Protein interactions for RNA: ENST00000617462.4

CPEB1-213, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-213ENST00000617462 NISCHQ9Y2I1 1504 aa30.72■■■□□ 2.51
CPEB1-213ENST00000617462 CCDC180Q9P1Z9 1646 aa26.53■■□□□ 1.84
CPEB1-213ENST00000617462 ZCCHC6Q5VYS8 1495 aaKnown RBP25.87■■□□□ 1.73
CPEB1-213ENST00000617462 SHROOM4Q9ULL8 1493 aa25.55■■□□□ 1.68
CPEB1-213ENST00000617462 DCAF8L2P0C7V8 631 aa25.45■■□□□ 1.66
CPEB1-213ENST00000617462 DCAF1Q9Y4B6 1507 aa25.24■■□□□ 1.63
CPEB1-213ENST00000617462 ABCC9O60706 1549 aa25.07■■□□□ 1.6
CPEB1-213ENST00000617462 MYO15BQ96JP2 1530 aa24.77■■□□□ 1.56
CPEB1-213ENST00000617462 SCRIBQ14160 1630 aa24.68■■□□□ 1.54
CPEB1-213ENST00000617462 SUPT5HO00267 1087 aaKnown RBP24.66■■□□□ 1.54
CPEB1-213ENST00000617462 NACADO15069 1562 aa24.62■■□□□ 1.53
CPEB1-213ENST00000617462 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
CPEB1-213ENST00000617462 UNC13AQ9UPW8 1703 aa24.14■■□□□ 1.46
CPEB1-213ENST00000617462 CECR2Q9BXF3 1484 aa24.01■■□□□ 1.43
CPEB1-213ENST00000617462 RSF1Q96T23 1441 aaPredicted RBP24.01■■□□□ 1.43
CPEB1-213ENST00000617462 MROH2BQ7Z745 1585 aa23.86■■□□□ 1.41
CPEB1-213ENST00000617462 BICRAQ9NZM4 1560 aa23.82■■□□□ 1.4
CPEB1-213ENST00000617462 PABPN1Q86U42 306 aaKnown RBP eCLIP23.77■■□□□ 1.4
CPEB1-213ENST00000617462 WIZO95785 1651 aa23.72■■□□□ 1.39
CPEB1-213ENST00000617462 CHIC1Q5VXU3 224 aa23.69■■□□□ 1.38
CPEB1-213ENST00000617462 BAZ1AQ9NRL2 1556 aaPredicted RBP23.63■■□□□ 1.37
CPEB1-213ENST00000617462 SMARCA4P51532 1647 aa23.58■■□□□ 1.37
CPEB1-213ENST00000617462 TOP2AP11388 1531 aaKnown RBP23.31■■□□□ 1.32
CPEB1-213ENST00000617462 SMARCA2P51531 1590 aa23.19■■□□□ 1.3
CPEB1-213ENST00000617462 PEG3Q9GZU2 1588 aa23.18■■□□□ 1.3
CPEB1-213ENST00000617462 CCDC88BA6NC98 1476 aa23.17■■□□□ 1.3
CPEB1-213ENST00000617462 EIF4G1Q04637 1599 aaKnown RBP23.16■■□□□ 1.3
CPEB1-213ENST00000617462 ATAD2BQ9ULI0 1458 aa23.1■■□□□ 1.29
CPEB1-213ENST00000617462 TRIM41Q8WV44 630 aa23.01■■□□□ 1.27
CPEB1-213ENST00000617462 BAZ1BQ9UIG0 1483 aaKnown RBP22.97■■□□□ 1.27
CPEB1-213ENST00000617462 LOC105371045A0A1W2PR82 267 aa22.95■■□□□ 1.26
CPEB1-213ENST00000617462 ABCC8Q09428 1581 aa22.9■■□□□ 1.26
CPEB1-213ENST00000617462 FAM9AQ8IZU1 332 aaPredicted RBP22.8■■□□□ 1.24
CPEB1-213ENST00000617462 NCAPD3P42695 1498 aa22.77■■□□□ 1.24
CPEB1-213ENST00000617462 HMGXB3Q12766 1538 aa22.75■■□□□ 1.23
CPEB1-213ENST00000617462 CC2D2AQ9P2K1 1620 aa22.64■■□□□ 1.21
CPEB1-213ENST00000617462 EHMT2Q96KQ7 1210 aa22.62■■□□□ 1.21
CPEB1-213ENST00000617462 SYNJ1O43426 1573 aa22.55■■□□□ 1.2
CPEB1-213ENST00000617462 WRNQ14191 1432 aaPredicted RBP eCLIP22.54■■□□□ 1.2
CPEB1-213ENST00000617462 SOGA1O94964 1423 aa22.5■■□□□ 1.19
CPEB1-213ENST00000617462 RUSC2Q8N2Y8 1516 aa22.47■■□□□ 1.19
CPEB1-213ENST00000617462 CFTRP13569 1480 aa22.39■■□□□ 1.18
CPEB1-213ENST00000617462 TOP2BQ02880 1626 aa22.31■■□□□ 1.16
CPEB1-213ENST00000617462 PRDM2Q13029 1718 aa22.29■■□□□ 1.16
CPEB1-213ENST00000617462 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
CPEB1-213ENST00000617462 CUX1P39880 1505 aa22.27■■□□□ 1.16
CPEB1-213ENST00000617462 DNAJC5BQ9UF47 199 aa22.27■■□□□ 1.16
CPEB1-213ENST00000617462 CADPSQ9ULU8 1353 aa22.24■■□□□ 1.15
CPEB1-213ENST00000617462 CSRNP3Q8WYN3 585 aa22.21■■□□□ 1.15
CPEB1-213ENST00000617462 EEA1Q15075 1411 aa22.19■■□□□ 1.14
CPEB1-213ENST00000617462 NESP48681 1621 aa22.17■■□□□ 1.14
CPEB1-213ENST00000617462 PCGF6Q9BYE7 350 aa22.15■■□□□ 1.14
CPEB1-213ENST00000617462 FANCD2Q9BXW9 1451 aa22.05■■□□□ 1.12
CPEB1-213ENST00000617462 GOLGA3Q08378 1498 aa22.04■■□□□ 1.12
CPEB1-213ENST00000617462 KIF21BO75037 1637 aa22.03■■□□□ 1.12
CPEB1-213ENST00000617462 TNIKQ9UKE5 1360 aa22.03■■□□□ 1.12
CPEB1-213ENST00000617462 CEP162Q5TB80 1403 aa22.02■■□□□ 1.12
CPEB1-213ENST00000617462 UBTFP17480 764 aaKnown RBP22■■□□□ 1.11
CPEB1-213ENST00000617462 RAPGEF2Q9Y4G8 1499 aa21.99■■□□□ 1.11
CPEB1-213ENST00000617462 CEP164Q9UPV0 1460 aa21.99■■□□□ 1.11
CPEB1-213ENST00000617462 FGD5Q6ZNL6 1462 aa21.95■■□□□ 1.1
CPEB1-213ENST00000617462 PPARGC1BQ86YN6 1023 aaKnown RBP21.94■■□□□ 1.1
CPEB1-213ENST00000617462 LAMC3Q9Y6N6 1575 aa21.93■■□□□ 1.1
CPEB1-213ENST00000617462 TRIM26Q12899 539 aaPredicted RBP21.89■■□□□ 1.09
CPEB1-213ENST00000617462 KIF27Q86VH2 1401 aa21.88■■□□□ 1.09
CPEB1-213ENST00000617462 PRXQ9BXM0 1461 aa21.87■■□□□ 1.09
CPEB1-213ENST00000617462 DNMBPQ6XZF7 1577 aa21.86■■□□□ 1.09
CPEB1-213ENST00000617462 TOPBP1Q92547 1522 aa21.85■■□□□ 1.09
CPEB1-213ENST00000617462 CUX2O14529 1486 aa21.85■■□□□ 1.09
CPEB1-213ENST00000617462 KIF21AQ7Z4S6 1674 aa21.85■■□□□ 1.09
CPEB1-213ENST00000617462 URB2Q14146 1524 aaKnown RBP21.82■■□□□ 1.08
CPEB1-213ENST00000617462 RAD54L2Q9Y4B4 1467 aa21.81■■□□□ 1.08
CPEB1-213ENST00000617462 POLA1P09884 1462 aaPredicted RBP21.79■■□□□ 1.08
CPEB1-213ENST00000617462 ERICH3Q5RHP9 1530 aa21.78■■□□□ 1.08
CPEB1-213ENST00000617462 RANGAP1P46060 587 aaPredicted RBP21.77■■□□□ 1.08
CPEB1-213ENST00000617462 CLIP1P30622 1438 aa21.74■■□□□ 1.07
CPEB1-213ENST00000617462 IGF1RP08069 1367 aa21.74■■□□□ 1.07
CPEB1-213ENST00000617462 PDS5BQ9NTI5 1447 aa21.73■■□□□ 1.07
CPEB1-213ENST00000617462 TTBK1Q5TCY1 1321 aaPredicted RBP21.69■■□□□ 1.06
CPEB1-213ENST00000617462 ABCA10Q8WWZ4 1543 aa21.68■■□□□ 1.06
CPEB1-213ENST00000617462 HRCP23327 699 aa21.66■■□□□ 1.06
CPEB1-213ENST00000617462 WDR97A6NE52 1622 aa21.66■■□□□ 1.06
CPEB1-213ENST00000617462 CARMIL1Q5VZK9 1371 aa21.61■■□□□ 1.05
CPEB1-213ENST00000617462 ARAP1Q96P48 1450 aa21.58■■□□□ 1.04
CPEB1-213ENST00000617462 VPS8Q8N3P4 1428 aa21.57■■□□□ 1.04
CPEB1-213ENST00000617462 TDRD9Q8NDG6 1382 aaKnown RBP21.54■■□□□ 1.04
CPEB1-213ENST00000617462 TARBP1Q13395 1621 aaKnown RBP21.53■■□□□ 1.04
CPEB1-213ENST00000617462 ABCA5Q8WWZ7 1642 aa21.53■■□□□ 1.04
CPEB1-213ENST00000617462 ARHGAP35Q9NRY4 1499 aa21.5■■□□□ 1.03
CPEB1-213ENST00000617462 MRC2Q9UBG0 1479 aa21.5■■□□□ 1.03
CPEB1-213ENST00000617462 CUL7Q14999 1698 aa21.45■■□□□ 1.02
CPEB1-213ENST00000617462 GAPVD1Q14C86 1478 aa21.44■■□□□ 1.02
CPEB1-213ENST00000617462 WDR62O43379 1518 aa21.39■■□□□ 1.01
CPEB1-213ENST00000617462 AQRO60306 1485 aaKnown RBP eCLIP21.37■■□□□ 1.011e-6■■■■□ 20
CPEB1-213ENST00000617462 PBRM1Q86U86 1689 aa21.36■■□□□ 1.01
CPEB1-213ENST00000617462 CTTNBP2Q8WZ74 1663 aa21.34■■□□□ 1.01
CPEB1-213ENST00000617462 ERCC6Q03468 1493 aa21.34■■□□□ 1.01
CPEB1-213ENST00000617462 ZNF608Q9ULD9 1512 aaPredicted RBP21.34■■□□□ 1.01
CPEB1-213ENST00000617462 THOC2Q8NI27 1593 aaKnown RBP21.33■■□□□ 1.01
CPEB1-213ENST00000617462 KANK4Q5T7N3 995 aaPredicted RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms