RNA–Protein interactions for RNA: ENST00000489426.5

SRPK3-208, Transcript of SRSF protein kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SRPK3, Length 4,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK3-208ENST00000489426 NISCHQ9Y2I1 1504 aa22.87■■□□□ 1.25
SRPK3-208ENST00000489426 DCAF8L2P0C7V8 631 aa22.29■■□□□ 1.16
SRPK3-208ENST00000489426 SHROOM4Q9ULL8 1493 aa21.12■□□□□ 0.97
SRPK3-208ENST00000489426 SUPT5HO00267 1087 aaKnown RBP21.02■□□□□ 0.96
SRPK3-208ENST00000489426 PCGF6Q9BYE7 350 aa20.12■□□□□ 0.81
SRPK3-208ENST00000489426 PELP1Q8IZL8 1130 aaKnown RBP20.11■□□□□ 0.81
SRPK3-208ENST00000489426 EHMT2Q96KQ7 1210 aa20.08■□□□□ 0.8
SRPK3-208ENST00000489426 MYT1Q01538 1121 aa19.77■□□□□ 0.76
SRPK3-208ENST00000489426 FAM9AQ8IZU1 332 aaPredicted RBP19.74■□□□□ 0.75
SRPK3-208ENST00000489426 CENPBP07199 599 aaPredicted RBP19.72■□□□□ 0.75
SRPK3-208ENST00000489426 ABCC9O60706 1549 aa19.7■□□□□ 0.74
SRPK3-208ENST00000489426 ZEB1P37275 1124 aaPredicted RBP19.57■□□□□ 0.72
SRPK3-208ENST00000489426 HRCP23327 699 aa19.46■□□□□ 0.71
SRPK3-208ENST00000489426 TRIM41Q8WV44 630 aa19.45■□□□□ 0.7
SRPK3-208ENST00000489426 TTBK1Q5TCY1 1321 aaPredicted RBP19.41■□□□□ 0.7
SRPK3-208ENST00000489426 ERICH6Q7L0X2 663 aa19.37■□□□□ 0.69
SRPK3-208ENST00000489426 CCER1Q8TC90 406 aaPredicted RBP19.37■□□□□ 0.69
SRPK3-208ENST00000489426 PABPN1Q86U42 306 aaKnown RBP eCLIP19.33■□□□□ 0.69
SRPK3-208ENST00000489426 RANGAP1P46060 587 aaPredicted RBP19.29■□□□□ 0.68
SRPK3-208ENST00000489426 YTHDC1Q96MU7 727 aaKnown RBP19.28■□□□□ 0.68
SRPK3-208ENST00000489426 APLP2Q06481 763 aa19.27■□□□□ 0.68
SRPK3-208ENST00000489426 PPARGC1BQ86YN6 1023 aaKnown RBP19.16■□□□□ 0.66
SRPK3-208ENST00000489426 UBTFP17480 764 aaKnown RBP19.06■□□□□ 0.64
SRPK3-208ENST00000489426 TRIM26Q12899 539 aaPredicted RBP19.05■□□□□ 0.64
SRPK3-208ENST00000489426 CHIC1Q5VXU3 224 aa18.99■□□□□ 0.63
SRPK3-208ENST00000489426 CCDC180Q9P1Z9 1646 aa18.97■□□□□ 0.63
SRPK3-208ENST00000489426 ZCCHC6Q5VYS8 1495 aaKnown RBP18.97■□□□□ 0.63
SRPK3-208ENST00000489426 NEFLP07196 543 aa18.97■□□□□ 0.63
SRPK3-208ENST00000489426 ATP1B4Q9UN42 357 aaPredicted RBP18.92■□□□□ 0.62
SRPK3-208ENST00000489426 LOC105371045A0A1W2PR82 267 aa18.86■□□□□ 0.61
SRPK3-208ENST00000489426 SCRIBQ14160 1630 aa18.82■□□□□ 0.6
SRPK3-208ENST00000489426 GTF3C3Q9Y5Q9 886 aa18.63■□□□□ 0.57
SRPK3-208ENST00000489426 DIEXFQ68CQ4 756 aaKnown RBP18.62■□□□□ 0.57
SRPK3-208ENST00000489426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.51■□□□□ 0.55
SRPK3-208ENST00000489426 RB1CC1Q8TDY2 1594 aa18.42■□□□□ 0.54
SRPK3-208ENST00000489426 ACIN1Q9UKV3 1341 aaKnown RBP18.37■□□□□ 0.53
SRPK3-208ENST00000489426 HNRNPUL2Q1KMD3 747 aaKnown RBP18.37■□□□□ 0.53
SRPK3-208ENST00000489426 ITGAEP38570 1179 aa18.35■□□□□ 0.53
SRPK3-208ENST00000489426 NACADO15069 1562 aa18.31■□□□□ 0.52
SRPK3-208ENST00000489426 DAXXQ9UER7 740 aaPredicted RBP18.28■□□□□ 0.52
SRPK3-208ENST00000489426 RTL5Q5HYW3 569 aaPredicted RBP18.26■□□□□ 0.51
SRPK3-208ENST00000489426 BCANQ96GW7 911 aa18.25■□□□□ 0.51
SRPK3-208ENST00000489426 RSF1Q96T23 1441 aaPredicted RBP18.18■□□□□ 0.5
SRPK3-208ENST00000489426 FBLN2P98095 1184 aa18.16■□□□□ 0.5
SRPK3-208ENST00000489426 CSRNP3Q8WYN3 585 aa18.13■□□□□ 0.49
SRPK3-208ENST00000489426 DCAF1Q9Y4B6 1507 aa18.13■□□□□ 0.49
SRPK3-208ENST00000489426 SCAF1Q9H7N4 1312 aaKnown RBP18.1■□□□□ 0.49
SRPK3-208ENST00000489426 CNGB1Q14028 1251 aaPredicted RBP18.08■□□□□ 0.48
SRPK3-208ENST00000489426 CECR2Q9BXF3 1484 aa18.07■□□□□ 0.48
SRPK3-208ENST00000489426 POLR3GLQ9BT43 218 aa18.05■□□□□ 0.48
SRPK3-208ENST00000489426 MYT1LQ9UL68 1186 aa18.05■□□□□ 0.48
SRPK3-208ENST00000489426 ZNF316A6NFI3 1004 aaPredicted RBP18.04■□□□□ 0.48
SRPK3-208ENST00000489426 P3H3Q8IVL6 736 aa18.04■□□□□ 0.48
SRPK3-208ENST00000489426 NEUROD1Q13562 356 aa18.02■□□□□ 0.48
SRPK3-208ENST00000489426 CDK11AQ9UQ88 783 aaPredicted RBP17.96■□□□□ 0.47
SRPK3-208ENST00000489426 FAM50AQ14320 339 aaKnown RBP17.96■□□□□ 0.46
SRPK3-208ENST00000489426 ARID3CA6NKF2 412 aa17.94■□□□□ 0.46
SRPK3-208ENST00000489426 BAZ1BQ9UIG0 1483 aaKnown RBP17.89■□□□□ 0.45
SRPK3-208ENST00000489426 BAZ1AQ9NRL2 1556 aaPredicted RBP17.85■□□□□ 0.45
SRPK3-208ENST00000489426 CLSPNQ9HAW4 1339 aa17.8■□□□□ 0.44
SRPK3-208ENST00000489426 MROH2BQ7Z745 1585 aa17.79■□□□□ 0.44
SRPK3-208ENST00000489426 ANP32CO43423 234 aa17.77■□□□□ 0.43
SRPK3-208ENST00000489426 EIF5BO60841 1220 aaKnown RBP17.75■□□□□ 0.43
SRPK3-208ENST00000489426 MYO15BQ96JP2 1530 aa17.74■□□□□ 0.43
SRPK3-208ENST00000489426 FKBP8Q14318 412 aa17.73■□□□□ 0.43
SRPK3-208ENST00000489426 TRIM52Q96A61 297 aa17.7■□□□□ 0.42
SRPK3-208ENST00000489426 WRNQ14191 1432 aaPredicted RBP eCLIP17.7■□□□□ 0.42
SRPK3-208ENST00000489426 ANP32AP39687 249 aaKnown RBP17.64■□□□□ 0.41
SRPK3-208ENST00000489426 ZNF777Q9ULD5 760 aaPredicted RBP17.59■□□□□ 0.41
SRPK3-208ENST00000489426 CCDC88BA6NC98 1476 aa17.56■□□□□ 0.4
SRPK3-208ENST00000489426 CHMP7Q8WUX9 453 aaPredicted RBP17.56■□□□□ 0.4
SRPK3-208ENST00000489426 NPM2Q86SE8 214 aaKnown RBP17.55■□□□□ 0.4
SRPK3-208ENST00000489426 WIZO95785 1651 aa17.55■□□□□ 0.4
SRPK3-208ENST00000489426 MIER1Q8N108 512 aa17.55■□□□□ 0.4
SRPK3-208ENST00000489426 ANP32EQ9BTT0 268 aa17.52■□□□□ 0.4
SRPK3-208ENST00000489426 NBR1Q14596 966 aa17.52■□□□□ 0.39
SRPK3-208ENST00000489426 CLIP1P30622 1438 aa17.5■□□□□ 0.39
SRPK3-208ENST00000489426 SMARCA2P51531 1590 aa17.45■□□□□ 0.38
SRPK3-208ENST00000489426 ZNF326Q5BKZ1 582 aaKnown RBP17.45■□□□□ 0.38
SRPK3-208ENST00000489426 EEA1Q15075 1411 aa17.45■□□□□ 0.38
SRPK3-208ENST00000489426 KIF27Q86VH2 1401 aa17.44■□□□□ 0.38
SRPK3-208ENST00000489426 ABCC8Q09428 1581 aa17.44■□□□□ 0.38
SRPK3-208ENST00000489426 SOGA1O94964 1423 aa17.44■□□□□ 0.38
SRPK3-208ENST00000489426 ERCC6Q03468 1493 aa17.43■□□□□ 0.38
SRPK3-208ENST00000489426 GOLGA3Q08378 1498 aa17.43■□□□□ 0.38
SRPK3-208ENST00000489426 CEP162Q5TB80 1403 aa17.42■□□□□ 0.38
SRPK3-208ENST00000489426 HNRNPUQ00839 825 aaKnown RBP eCLIP17.41■□□□□ 0.38
SRPK3-208ENST00000489426 DDX10Q13206 875 aaKnown RBP17.41■□□□□ 0.38
SRPK3-208ENST00000489426 ATAD2BQ9ULI0 1458 aa17.38■□□□□ 0.37
SRPK3-208ENST00000489426 CHIC2Q9UKJ5 165 aa17.37■□□□□ 0.37
SRPK3-208ENST00000489426 TOP2AP11388 1531 aaKnown RBP17.36■□□□□ 0.37
SRPK3-208ENST00000489426 GLIPR1L2Q4G1C9 344 aa17.35■□□□□ 0.37
SRPK3-208ENST00000489426 BCL11AQ9H165 835 aa17.35■□□□□ 0.37
SRPK3-208ENST00000489426 SMARCA4P51532 1647 aa17.35■□□□□ 0.37
SRPK3-208ENST00000489426 ZBTB47Q9UFB7 747 aaPredicted RBP17.35■□□□□ 0.37
SRPK3-208ENST00000489426 SLC4A1APQ9BWU0 796 aaKnown RBP17.34■□□□□ 0.37
SRPK3-208ENST00000489426 MTUS2Q5JR59 1369 aa17.33■□□□□ 0.36
SRPK3-208ENST00000489426 CUX2O14529 1486 aa17.33■□□□□ 0.36
SRPK3-208ENST00000489426 CEP164Q9UPV0 1460 aa17.32■□□□□ 0.36
SRPK3-208ENST00000489426 NPM1P06748 294 aaKnown RBP eCLIP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms