RNA–Protein interactions for RNA: ENST00000543771.5

KDM4C-215, Transcript of lysine demethylase 4C, humanhuman

TSL 2 BASIC

Gene KDM4C, Length 3,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-215ENST00000543771 NISCHQ9Y2I1 1504 aa16.31■□□□□ 0.2
KDM4C-215ENST00000543771 CCDC180Q9P1Z9 1646 aa14.06□□□□□ -0.16
KDM4C-215ENST00000543771 ZCCHC6Q5VYS8 1495 aaKnown RBP13.71□□□□□ -0.21
KDM4C-215ENST00000543771 DCAF8L2P0C7V8 631 aa13.56□□□□□ -0.24
KDM4C-215ENST00000543771 SHROOM4Q9ULL8 1493 aa13.54□□□□□ -0.24
KDM4C-215ENST00000543771 DCAF1Q9Y4B6 1507 aa13.4□□□□□ -0.26
KDM4C-215ENST00000543771 ABCC9O60706 1549 aa13.33□□□□□ -0.28
KDM4C-215ENST00000543771 MYO15BQ96JP2 1530 aa13.17□□□□□ -0.3
KDM4C-215ENST00000543771 SUPT5HO00267 1087 aaKnown RBP13.09□□□□□ -0.31
KDM4C-215ENST00000543771 NACADO15069 1562 aa13.09□□□□□ -0.31
KDM4C-215ENST00000543771 SCRIBQ14160 1630 aa13.07□□□□□ -0.32
KDM4C-215ENST00000543771 RB1CC1Q8TDY2 1594 aa12.95□□□□□ -0.34
KDM4C-215ENST00000543771 UNC13AQ9UPW8 1703 aa12.78□□□□□ -0.36
KDM4C-215ENST00000543771 CECR2Q9BXF3 1484 aa12.74□□□□□ -0.37
KDM4C-215ENST00000543771 RSF1Q96T23 1441 aaPredicted RBP12.74□□□□□ -0.37
KDM4C-215ENST00000543771 PABPN1Q86U42 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
KDM4C-215ENST00000543771 MROH2BQ7Z745 1585 aa12.66□□□□□ -0.38
KDM4C-215ENST00000543771 BICRAQ9NZM4 1560 aa12.64□□□□□ -0.39
KDM4C-215ENST00000543771 CHIC1Q5VXU3 224 aa12.57□□□□□ -0.4
KDM4C-215ENST00000543771 WIZO95785 1651 aa12.56□□□□□ -0.4
KDM4C-215ENST00000543771 BAZ1AQ9NRL2 1556 aaPredicted RBP12.54□□□□□ -0.4
KDM4C-215ENST00000543771 SMARCA4P51532 1647 aa12.5□□□□□ -0.41
KDM4C-215ENST00000543771 AEBP2Q6ZN18 517 aaPredicted RBP12.39□□□□□ -0.43
KDM4C-215ENST00000543771 TOP2AP11388 1531 aaKnown RBP12.35□□□□□ -0.43
KDM4C-215ENST00000543771 PEG3Q9GZU2 1588 aa12.3□□□□□ -0.44
KDM4C-215ENST00000543771 CCDC88BA6NC98 1476 aa12.3□□□□□ -0.44
KDM4C-215ENST00000543771 SMARCA2P51531 1590 aa12.28□□□□□ -0.44
KDM4C-215ENST00000543771 ATAD2BQ9ULI0 1458 aa12.28□□□□□ -0.44
KDM4C-215ENST00000543771 TRIM41Q8WV44 630 aa12.24□□□□□ -0.45
KDM4C-215ENST00000543771 EIF4G1Q04637 1599 aaKnown RBP12.23□□□□□ -0.45
KDM4C-215ENST00000543771 BAZ1BQ9UIG0 1483 aaKnown RBP12.19□□□□□ -0.46
KDM4C-215ENST00000543771 LOC105371045A0A1W2PR82 267 aa12.17□□□□□ -0.46
KDM4C-215ENST00000543771 ABCC8Q09428 1581 aa12.12□□□□□ -0.47
KDM4C-215ENST00000543771 NCAPD3P42695 1498 aa12.12□□□□□ -0.47
KDM4C-215ENST00000543771 FAM9AQ8IZU1 332 aaPredicted RBP12.1□□□□□ -0.47
KDM4C-215ENST00000543771 HMGXB3Q12766 1538 aa12.07□□□□□ -0.48
KDM4C-215ENST00000543771 CC2D2AQ9P2K1 1620 aa12.03□□□□□ -0.48
KDM4C-215ENST00000543771 EHMT2Q96KQ7 1210 aa11.99□□□□□ -0.49
KDM4C-215ENST00000543771 WRNQ14191 1432 aaPredicted RBP eCLIP11.96□□□□□ -0.49
KDM4C-215ENST00000543771 SYNJ1O43426 1573 aa11.93□□□□□ -0.5
KDM4C-215ENST00000543771 SOGA1O94964 1423 aa11.93□□□□□ -0.5
KDM4C-215ENST00000543771 RUSC2Q8N2Y8 1516 aa11.91□□□□□ -0.5
KDM4C-215ENST00000543771 CFTRP13569 1480 aa11.9□□□□□ -0.5
KDM4C-215ENST00000543771 DNAJC5BQ9UF47 199 aa11.86□□□□□ -0.51
KDM4C-215ENST00000543771 CADPSQ9ULU8 1353 aa11.84□□□□□ -0.51
KDM4C-215ENST00000543771 TOP2BQ02880 1626 aa11.82□□□□□ -0.52
KDM4C-215ENST00000543771 CSRNP3Q8WYN3 585 aa11.82□□□□□ -0.52
KDM4C-215ENST00000543771 CUX1P39880 1505 aa11.8□□□□□ -0.52
KDM4C-215ENST00000543771 BIVM-ERCC5R4GMW8 1640 aa11.79□□□□□ -0.52
KDM4C-215ENST00000543771 PRDM2Q13029 1718 aa11.78□□□□□ -0.52
KDM4C-215ENST00000543771 EEA1Q15075 1411 aa11.78□□□□□ -0.52
KDM4C-215ENST00000543771 NESP48681 1621 aa11.77□□□□□ -0.52
KDM4C-215ENST00000543771 PCGF6Q9BYE7 350 aa11.73□□□□□ -0.53
KDM4C-215ENST00000543771 FANCD2Q9BXW9 1451 aa11.71□□□□□ -0.53
KDM4C-215ENST00000543771 UBTFP17480 764 aaKnown RBP11.7□□□□□ -0.54
KDM4C-215ENST00000543771 TNIKQ9UKE5 1360 aa11.69□□□□□ -0.54
KDM4C-215ENST00000543771 GOLGA3Q08378 1498 aa11.68□□□□□ -0.54
KDM4C-215ENST00000543771 CEP162Q5TB80 1403 aa11.66□□□□□ -0.54
KDM4C-215ENST00000543771 CEP164Q9UPV0 1460 aa11.66□□□□□ -0.54
KDM4C-215ENST00000543771 KIF21BO75037 1637 aa11.66□□□□□ -0.54
KDM4C-215ENST00000543771 RAPGEF2Q9Y4G8 1499 aa11.65□□□□□ -0.54
KDM4C-215ENST00000543771 LAMC3Q9Y6N6 1575 aa11.65□□□□□ -0.54
KDM4C-215ENST00000543771 FGD5Q6ZNL6 1462 aa11.64□□□□□ -0.55
KDM4C-215ENST00000543771 PPARGC1BQ86YN6 1023 aaKnown RBP11.63□□□□□ -0.55
KDM4C-215ENST00000543771 KIF27Q86VH2 1401 aa11.62□□□□□ -0.55
KDM4C-215ENST00000543771 TRIM26Q12899 539 aaPredicted RBP11.61□□□□□ -0.55
KDM4C-215ENST00000543771 TOPBP1Q92547 1522 aa11.6□□□□□ -0.55
KDM4C-215ENST00000543771 PRXQ9BXM0 1461 aa11.6□□□□□ -0.55
KDM4C-215ENST00000543771 CUX2O14529 1486 aa11.6□□□□□ -0.55
KDM4C-215ENST00000543771 DNMBPQ6XZF7 1577 aa11.59□□□□□ -0.55
KDM4C-215ENST00000543771 URB2Q14146 1524 aaKnown RBP11.58□□□□□ -0.56
KDM4C-215ENST00000543771 RAD54L2Q9Y4B4 1467 aa11.58□□□□□ -0.56
KDM4C-215ENST00000543771 PDS5BQ9NTI5 1447 aa11.58□□□□□ -0.56
KDM4C-215ENST00000543771 KIF21AQ7Z4S6 1674 aa11.57□□□□□ -0.56
KDM4C-215ENST00000543771 POLA1P09884 1462 aaPredicted RBP11.57□□□□□ -0.56
KDM4C-215ENST00000543771 IGF1RP08069 1367 aa11.57□□□□□ -0.56
KDM4C-215ENST00000543771 RANGAP1P46060 587 aaPredicted RBP11.56□□□□□ -0.56
KDM4C-215ENST00000543771 ERICH3Q5RHP9 1530 aa11.54□□□□□ -0.56
KDM4C-215ENST00000543771 CLIP1P30622 1438 aa11.53□□□□□ -0.56
KDM4C-215ENST00000543771 ABCA10Q8WWZ4 1543 aa11.51□□□□□ -0.57
KDM4C-215ENST00000543771 CARMIL1Q5VZK9 1371 aa11.49□□□□□ -0.57
KDM4C-215ENST00000543771 TTBK1Q5TCY1 1321 aaPredicted RBP11.49□□□□□ -0.57
KDM4C-215ENST00000543771 TDRD9Q8NDG6 1382 aaKnown RBP11.46□□□□□ -0.57
KDM4C-215ENST00000543771 WDR97A6NE52 1622 aa11.45□□□□□ -0.58
KDM4C-215ENST00000543771 HRCP23327 699 aa11.45□□□□□ -0.58
KDM4C-215ENST00000543771 VPS8Q8N3P4 1428 aa11.43□□□□□ -0.58
KDM4C-215ENST00000543771 MRC2Q9UBG0 1479 aa11.42□□□□□ -0.58
KDM4C-215ENST00000543771 TARBP1Q13395 1621 aaKnown RBP11.42□□□□□ -0.58
KDM4C-215ENST00000543771 ARAP1Q96P48 1450 aa11.41□□□□□ -0.58
KDM4C-215ENST00000543771 ABCA5Q8WWZ7 1642 aa11.4□□□□□ -0.58
KDM4C-215ENST00000543771 GAPVD1Q14C86 1478 aa11.4□□□□□ -0.59
KDM4C-215ENST00000543771 ARHGAP35Q9NRY4 1499 aa11.39□□□□□ -0.59
KDM4C-215ENST00000543771 AQRO60306 1485 aaKnown RBP eCLIP11.36□□□□□ -0.593e-7■■■■■ 36.6
KDM4C-215ENST00000543771 CUL7Q14999 1698 aa11.36□□□□□ -0.59
KDM4C-215ENST00000543771 WDR62O43379 1518 aa11.36□□□□□ -0.59
KDM4C-215ENST00000543771 ERCC6Q03468 1493 aa11.35□□□□□ -0.59
KDM4C-215ENST00000543771 ZNF608Q9ULD9 1512 aaPredicted RBP11.33□□□□□ -0.6
KDM4C-215ENST00000543771 P3H3Q8IVL6 736 aa11.32□□□□□ -0.6
KDM4C-215ENST00000543771 APLP2Q06481 763 aa11.32□□□□□ -0.6
KDM4C-215ENST00000543771 THOC2Q8NI27 1593 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms