RNA–Protein interactions for RNA: ENST00000341846.9

TRIM29-201, Transcript of tripartite motif containing 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM29, Length 3,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-201ENST00000341846 NISCHQ9Y2I1 1504 aa23.64■■□□□ 1.37
TRIM29-201ENST00000341846 SHROOM4Q9ULL8 1493 aa20.27■□□□□ 0.84
TRIM29-201ENST00000341846 DCAF8L2P0C7V8 631 aa20.27■□□□□ 0.84
TRIM29-201ENST00000341846 CCDC180Q9P1Z9 1646 aa20.08■□□□□ 0.8
TRIM29-201ENST00000341846 ZCCHC6Q5VYS8 1495 aaKnown RBP19.86■□□□□ 0.77
TRIM29-201ENST00000341846 SUPT5HO00267 1087 aaKnown RBP19.71■□□□□ 0.75
TRIM29-201ENST00000341846 ABCC9O60706 1549 aa19.39■□□□□ 0.7
TRIM29-201ENST00000341846 DCAF1Q9Y4B6 1507 aa19.21■□□□□ 0.67
TRIM29-201ENST00000341846 SCRIBQ14160 1630 aa19.06■□□□□ 0.64
TRIM29-201ENST00000341846 NACADO15069 1562 aa18.77■□□□□ 0.6
TRIM29-201ENST00000341846 MYO15BQ96JP2 1530 aa18.77■□□□□ 0.6
TRIM29-201ENST00000341846 CHIC1Q5VXU3 224 aa18.76■□□□□ 0.59
TRIM29-201ENST00000341846 RSF1Q96T23 1441 aaPredicted RBP18.63■□□□□ 0.57
TRIM29-201ENST00000341846 CECR2Q9BXF3 1484 aa18.61■□□□□ 0.57
TRIM29-201ENST00000341846 PABPN1Q86U42 306 aaKnown RBP eCLIP18.61■□□□□ 0.57
TRIM29-201ENST00000341846 RB1CC1Q8TDY2 1594 aa18.61■□□□□ 0.57
TRIM29-201ENST00000341846 MROH2BQ7Z745 1585 aa18.44■□□□□ 0.54
TRIM29-201ENST00000341846 LOC105371045A0A1W2PR82 267 aa18.36■□□□□ 0.53
TRIM29-201ENST00000341846 EHMT2Q96KQ7 1210 aa18.31■□□□□ 0.52
TRIM29-201ENST00000341846 FAM9AQ8IZU1 332 aaPredicted RBP18.29■□□□□ 0.52
TRIM29-201ENST00000341846 WIZO95785 1651 aa18.29■□□□□ 0.52
TRIM29-201ENST00000341846 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
TRIM29-201ENST00000341846 UNC13AQ9UPW8 1703 aa18.24■□□□□ 0.51
TRIM29-201ENST00000341846 BAZ1AQ9NRL2 1556 aaPredicted RBP18.16■□□□□ 0.5
TRIM29-201ENST00000341846 BICRAQ9NZM4 1560 aa18.11■□□□□ 0.49
TRIM29-201ENST00000341846 SMARCA4P51532 1647 aa18.06■□□□□ 0.48
TRIM29-201ENST00000341846 CCDC88BA6NC98 1476 aa17.95■□□□□ 0.46
TRIM29-201ENST00000341846 PCGF6Q9BYE7 350 aa17.92■□□□□ 0.46
TRIM29-201ENST00000341846 TOP2AP11388 1531 aaKnown RBP17.9■□□□□ 0.46
TRIM29-201ENST00000341846 HRCP23327 699 aa17.85■□□□□ 0.45
TRIM29-201ENST00000341846 ABCC8Q09428 1581 aa17.82■□□□□ 0.44
TRIM29-201ENST00000341846 SMARCA2P51531 1590 aa17.82■□□□□ 0.44
TRIM29-201ENST00000341846 ATAD2BQ9ULI0 1458 aa17.78■□□□□ 0.44
TRIM29-201ENST00000341846 BAZ1BQ9UIG0 1483 aaKnown RBP17.74■□□□□ 0.43
TRIM29-201ENST00000341846 PPARGC1BQ86YN6 1023 aaKnown RBP17.73■□□□□ 0.43
TRIM29-201ENST00000341846 EIF4G1Q04637 1599 aaKnown RBP17.66■□□□□ 0.42
TRIM29-201ENST00000341846 SOGA1O94964 1423 aa17.62■□□□□ 0.41
TRIM29-201ENST00000341846 PEG3Q9GZU2 1588 aa17.6■□□□□ 0.41
TRIM29-201ENST00000341846 TTBK1Q5TCY1 1321 aaPredicted RBP17.56■□□□□ 0.4
TRIM29-201ENST00000341846 RUSC2Q8N2Y8 1516 aa17.55■□□□□ 0.4
TRIM29-201ENST00000341846 WRNQ14191 1432 aaPredicted RBP eCLIP17.54■□□□□ 0.4
TRIM29-201ENST00000341846 UBTFP17480 764 aaKnown RBP17.54■□□□□ 0.4
TRIM29-201ENST00000341846 RANGAP1P46060 587 aaPredicted RBP17.51■□□□□ 0.39
TRIM29-201ENST00000341846 CSRNP3Q8WYN3 585 aa17.49■□□□□ 0.39
TRIM29-201ENST00000341846 TRIM26Q12899 539 aaPredicted RBP17.49■□□□□ 0.39
TRIM29-201ENST00000341846 PELP1Q8IZL8 1130 aaKnown RBP17.49■□□□□ 0.39
TRIM29-201ENST00000341846 NCAPD3P42695 1498 aa17.45■□□□□ 0.38
TRIM29-201ENST00000341846 SYNJ1O43426 1573 aa17.4■□□□□ 0.38
TRIM29-201ENST00000341846 HMGXB3Q12766 1538 aa17.32■□□□□ 0.36
TRIM29-201ENST00000341846 DNAJC5BQ9UF47 199 aa17.3■□□□□ 0.36
TRIM29-201ENST00000341846 CC2D2AQ9P2K1 1620 aa17.28■□□□□ 0.36
TRIM29-201ENST00000341846 CEP162Q5TB80 1403 aa17.28■□□□□ 0.36
TRIM29-201ENST00000341846 EEA1Q15075 1411 aa17.23■□□□□ 0.35
TRIM29-201ENST00000341846 TNIKQ9UKE5 1360 aa17.21■□□□□ 0.35
TRIM29-201ENST00000341846 CFTRP13569 1480 aa17.21■□□□□ 0.35
TRIM29-201ENST00000341846 GOLGA3Q08378 1498 aa17.19■□□□□ 0.34
TRIM29-201ENST00000341846 CADPSQ9ULU8 1353 aa17.18■□□□□ 0.34
TRIM29-201ENST00000341846 RAPGEF2Q9Y4G8 1499 aa17.16■□□□□ 0.34
TRIM29-201ENST00000341846 CUX1P39880 1505 aa17.16■□□□□ 0.34
TRIM29-201ENST00000341846 SCAF1Q9H7N4 1312 aaKnown RBP17.15■□□□□ 0.34
TRIM29-201ENST00000341846 TOP2BQ02880 1626 aa17.14■□□□□ 0.33
TRIM29-201ENST00000341846 CEP164Q9UPV0 1460 aa17.13■□□□□ 0.33
TRIM29-201ENST00000341846 NESP48681 1621 aa17.12■□□□□ 0.33
TRIM29-201ENST00000341846 CLIP1P30622 1438 aa17.07■□□□□ 0.32
TRIM29-201ENST00000341846 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.07■□□□□ 0.32
TRIM29-201ENST00000341846 KIF27Q86VH2 1401 aa17.03■□□□□ 0.32
TRIM29-201ENST00000341846 FANCD2Q9BXW9 1451 aa17.01■□□□□ 0.31
TRIM29-201ENST00000341846 CUX2O14529 1486 aa17.01■□□□□ 0.31
TRIM29-201ENST00000341846 BIVM-ERCC5R4GMW8 1640 aa17.01■□□□□ 0.31
TRIM29-201ENST00000341846 APLP2Q06481 763 aa17.01■□□□□ 0.31
TRIM29-201ENST00000341846 KIF21BO75037 1637 aa16.97■□□□□ 0.31
TRIM29-201ENST00000341846 FGD5Q6ZNL6 1462 aa16.96■□□□□ 0.31
TRIM29-201ENST00000341846 CCER1Q8TC90 406 aaPredicted RBP16.95■□□□□ 0.3
TRIM29-201ENST00000341846 HNRNPUL2Q1KMD3 747 aaKnown RBP16.94■□□□□ 0.3
TRIM29-201ENST00000341846 RAD54L2Q9Y4B4 1467 aa16.93■□□□□ 0.3
TRIM29-201ENST00000341846 PRXQ9BXM0 1461 aa16.92■□□□□ 0.3
TRIM29-201ENST00000341846 P3H3Q8IVL6 736 aa16.92■□□□□ 0.3
TRIM29-201ENST00000341846 IGF1RP08069 1367 aa16.91■□□□□ 0.3
TRIM29-201ENST00000341846 ATP1B4Q9UN42 357 aaPredicted RBP16.87■□□□□ 0.29
TRIM29-201ENST00000341846 VPS8Q8N3P4 1428 aa16.86■□□□□ 0.29
TRIM29-201ENST00000341846 CARMIL1Q5VZK9 1371 aa16.86■□□□□ 0.29
TRIM29-201ENST00000341846 TDRD9Q8NDG6 1382 aaKnown RBP16.84■□□□□ 0.29
TRIM29-201ENST00000341846 KANK4Q5T7N3 995 aaPredicted RBP16.82■□□□□ 0.28
TRIM29-201ENST00000341846 TOPBP1Q92547 1522 aa16.82■□□□□ 0.28
TRIM29-201ENST00000341846 ZEB1P37275 1124 aaPredicted RBP16.81■□□□□ 0.28
TRIM29-201ENST00000341846 POLA1P09884 1462 aaPredicted RBP16.81■□□□□ 0.28
TRIM29-201ENST00000341846 MYT1Q01538 1121 aa16.81■□□□□ 0.28
TRIM29-201ENST00000341846 PRDM2Q13029 1718 aa16.8■□□□□ 0.28
TRIM29-201ENST00000341846 ARAP1Q96P48 1450 aa16.79■□□□□ 0.28
TRIM29-201ENST00000341846 ERICH3Q5RHP9 1530 aa16.78■□□□□ 0.28
TRIM29-201ENST00000341846 URB2Q14146 1524 aaKnown RBP16.76■□□□□ 0.27
TRIM29-201ENST00000341846 PDS5BQ9NTI5 1447 aa16.76■□□□□ 0.27
TRIM29-201ENST00000341846 ITGAEP38570 1179 aa16.74■□□□□ 0.27
TRIM29-201ENST00000341846 DNMBPQ6XZF7 1577 aa16.74■□□□□ 0.27
TRIM29-201ENST00000341846 LAMC3Q9Y6N6 1575 aa16.71■□□□□ 0.27
TRIM29-201ENST00000341846 ARHGAP35Q9NRY4 1499 aa16.71■□□□□ 0.27
TRIM29-201ENST00000341846 ABCA10Q8WWZ4 1543 aa16.66■□□□□ 0.26
TRIM29-201ENST00000341846 KIF21AQ7Z4S6 1674 aa16.63■□□□□ 0.25
TRIM29-201ENST00000341846 FHOD3Q2V2M9 1422 aa16.61■□□□□ 0.25
TRIM29-201ENST00000341846 NEUROD1Q13562 356 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms