RNA–Protein interactions for RNA: ENST00000393792.2

UBTD2-201, Transcript of ubiquitin domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBTD2, Length 3,301 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTD2-201ENST00000393792 NISCHQ9Y2I1 1504 aa38.15■■■■□ 3.7
UBTD2-201ENST00000393792 SHROOM4Q9ULL8 1493 aa35■■■■□ 3.19
UBTD2-201ENST00000393792 SUPT5HO00267 1087 aaKnown RBP34.69■■■■□ 3.14
UBTD2-201ENST00000393792 DCAF8L2P0C7V8 631 aa34.15■■■■□ 3.06
UBTD2-201ENST00000393792 PCGF6Q9BYE7 350 aa33.37■■■□□ 2.93
UBTD2-201ENST00000393792 PPARGC1BQ86YN6 1023 aaKnown RBP33.05■■■□□ 2.88
UBTD2-201ENST00000393792 CHIC1Q5VXU3 224 aa32.98■■■□□ 2.87
UBTD2-201ENST00000393792 HRCP23327 699 aa32.95■■■□□ 2.86
UBTD2-201ENST00000393792 EHMT2Q96KQ7 1210 aa32.83■■■□□ 2.85
UBTD2-201ENST00000393792 LOC105371045A0A1W2PR82 267 aa32.77■■■□□ 2.84
UBTD2-201ENST00000393792 MYO15BQ96JP2 1530 aa32.77■■■□□ 2.84
UBTD2-201ENST00000393792 FAM9AQ8IZU1 332 aaPredicted RBP32.37■■■□□ 2.77
UBTD2-201ENST00000393792 ZCCHC6Q5VYS8 1495 aaKnown RBP32.16■■■□□ 2.74
UBTD2-201ENST00000393792 PELP1Q8IZL8 1130 aaKnown RBP31.96■■■□□ 2.71
UBTD2-201ENST00000393792 TRIM26Q12899 539 aaPredicted RBP31.79■■■□□ 2.68
UBTD2-201ENST00000393792 TTBK1Q5TCY1 1321 aaPredicted RBP31.76■■■□□ 2.67
UBTD2-201ENST00000393792 TRIM41Q8WV44 630 aa31.73■■■□□ 2.67
UBTD2-201ENST00000393792 SCAF1Q9H7N4 1312 aaKnown RBP31.52■■■□□ 2.64
UBTD2-201ENST00000393792 DCAF1Q9Y4B6 1507 aa31.34■■■□□ 2.61
UBTD2-201ENST00000393792 CCDC180Q9P1Z9 1646 aa31.29■■■□□ 2.6
UBTD2-201ENST00000393792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.19■■■□□ 2.58
UBTD2-201ENST00000393792 CCER1Q8TC90 406 aaPredicted RBP31.09■■■□□ 2.57
UBTD2-201ENST00000393792 ZEB1P37275 1124 aaPredicted RBP31.08■■■□□ 2.57
UBTD2-201ENST00000393792 SCRIBQ14160 1630 aa30.88■■■□□ 2.53
UBTD2-201ENST00000393792 RSF1Q96T23 1441 aaPredicted RBP30.76■■■□□ 2.51
UBTD2-201ENST00000393792 GTF3C3Q9Y5Q9 886 aa30.72■■■□□ 2.51
UBTD2-201ENST00000393792 YTHDC1Q96MU7 727 aaKnown RBP30.72■■■□□ 2.51
UBTD2-201ENST00000393792 NEUROD1Q13562 356 aa30.7■■■□□ 2.5
UBTD2-201ENST00000393792 RANGAP1P46060 587 aaPredicted RBP30.68■■■□□ 2.5
UBTD2-201ENST00000393792 MYT1Q01538 1121 aa30.65■■■□□ 2.5
UBTD2-201ENST00000393792 ACIN1Q9UKV3 1341 aaKnown RBP30.6■■■□□ 2.49
UBTD2-201ENST00000393792 RB1CC1Q8TDY2 1594 aa30.57■■■□□ 2.48
UBTD2-201ENST00000393792 ABCC9O60706 1549 aa30.51■■■□□ 2.47
UBTD2-201ENST00000393792 UBTFP17480 764 aaKnown RBP30.49■■■□□ 2.47
UBTD2-201ENST00000393792 DIEXFQ68CQ4 756 aaKnown RBP30.49■■■□□ 2.47
UBTD2-201ENST00000393792 CENPBP07199 599 aaPredicted RBP30.4■■■□□ 2.46
UBTD2-201ENST00000393792 CECR2Q9BXF3 1484 aa30.37■■■□□ 2.45
UBTD2-201ENST00000393792 HNRNPUL2Q1KMD3 747 aaKnown RBP30.32■■■□□ 2.44
UBTD2-201ENST00000393792 MROH2BQ7Z745 1585 aa30.05■■■□□ 2.4
UBTD2-201ENST00000393792 PABPN1Q86U42 306 aaKnown RBP eCLIP29.92■■■□□ 2.38
UBTD2-201ENST00000393792 WIZO95785 1651 aa29.89■■■□□ 2.38
UBTD2-201ENST00000393792 APLP2Q06481 763 aa29.88■■■□□ 2.37
UBTD2-201ENST00000393792 ABCC8Q09428 1581 aa29.84■■■□□ 2.37
UBTD2-201ENST00000393792 ZNF316A6NFI3 1004 aaPredicted RBP29.83■■■□□ 2.37
UBTD2-201ENST00000393792 MIER1Q8N108 512 aa29.78■■■□□ 2.36
UBTD2-201ENST00000393792 SOGA1O94964 1423 aa29.77■■■□□ 2.36
UBTD2-201ENST00000393792 CSRNP3Q8WYN3 585 aa29.77■■■□□ 2.36
UBTD2-201ENST00000393792 CCDC88BA6NC98 1476 aa29.75■■■□□ 2.35
UBTD2-201ENST00000393792 CEP162Q5TB80 1403 aa29.74■■■□□ 2.35
UBTD2-201ENST00000393792 ITGAEP38570 1179 aa29.68■■■□□ 2.34
UBTD2-201ENST00000393792 RUSC2Q8N2Y8 1516 aa29.59■■■□□ 2.33
UBTD2-201ENST00000393792 TNIKQ9UKE5 1360 aa29.31■■■□□ 2.28
UBTD2-201ENST00000393792 NACADO15069 1562 aa29.27■■■□□ 2.28
UBTD2-201ENST00000393792 BCANQ96GW7 911 aa29.26■■■□□ 2.27
UBTD2-201ENST00000393792 ATP1B4Q9UN42 357 aaPredicted RBP29.25■■■□□ 2.27
UBTD2-201ENST00000393792 BCL11AQ9H165 835 aa29.24■■■□□ 2.27
UBTD2-201ENST00000393792 BAZ1AQ9NRL2 1556 aaPredicted RBP29.2■■■□□ 2.27
UBTD2-201ENST00000393792 CLIP1P30622 1438 aa29.17■■■□□ 2.26
UBTD2-201ENST00000393792 GOLGA3Q08378 1498 aa29.11■■■□□ 2.25
UBTD2-201ENST00000393792 WRNQ14191 1432 aaPredicted RBP eCLIP29.09■■■□□ 2.25
UBTD2-201ENST00000393792 HIRIP3Q9BW71 556 aaPredicted RBP29■■■□□ 2.23
UBTD2-201ENST00000393792 TOP2AP11388 1531 aaKnown RBP28.97■■■□□ 2.23
UBTD2-201ENST00000393792 KANK4Q5T7N3 995 aaPredicted RBP28.96■■■□□ 2.23
UBTD2-201ENST00000393792 ANP32EQ9BTT0 268 aa28.96■■■□□ 2.23
UBTD2-201ENST00000393792 SMARCA2P51531 1590 aa28.95■■■□□ 2.23
UBTD2-201ENST00000393792 KCNH8Q96L42 1107 aa28.94■■■□□ 2.22
UBTD2-201ENST00000393792 P3H3Q8IVL6 736 aa28.87■■■□□ 2.21
UBTD2-201ENST00000393792 SUPT16HQ9Y5B9 1047 aaKnown RBP28.87■■■□□ 2.21
UBTD2-201ENST00000393792 SMARCA4P51532 1647 aa28.86■■■□□ 2.21
UBTD2-201ENST00000393792 RAPGEF2Q9Y4G8 1499 aa28.85■■■□□ 2.21
UBTD2-201ENST00000393792 EEA1Q15075 1411 aa28.83■■■□□ 2.21
UBTD2-201ENST00000393792 FAM50AQ14320 339 aaKnown RBP28.83■■■□□ 2.21
UBTD2-201ENST00000393792 CEP164Q9UPV0 1460 aa28.8■■■□□ 2.2
UBTD2-201ENST00000393792 DDX10Q13206 875 aaKnown RBP28.79■■■□□ 2.2
UBTD2-201ENST00000393792 TSHZ2Q9NRE2 1034 aa28.79■■■□□ 2.2
UBTD2-201ENST00000393792 EIF4G1Q04637 1599 aaKnown RBP28.77■■■□□ 2.2
UBTD2-201ENST00000393792 VPS8Q8N3P4 1428 aa28.76■■■□□ 2.19
UBTD2-201ENST00000393792 TRIM52Q96A61 297 aa28.68■■■□□ 2.18
UBTD2-201ENST00000393792 FKBP8Q14318 412 aa28.66■■■□□ 2.18
UBTD2-201ENST00000393792 SIN3AQ96ST3 1273 aa28.66■■■□□ 2.18
UBTD2-201ENST00000393792 DHX57Q6P158 1386 aaKnown RBP28.61■■■□□ 2.17
UBTD2-201ENST00000393792 SYNJ1O43426 1573 aa28.61■■■□□ 2.17
UBTD2-201ENST00000393792 CNGB1Q14028 1251 aaPredicted RBP28.6■■■□□ 2.17
UBTD2-201ENST00000393792 NEFLP07196 543 aa28.51■■■□□ 2.15
UBTD2-201ENST00000393792 BAZ1BQ9UIG0 1483 aaKnown RBP28.48■■■□□ 2.15
UBTD2-201ENST00000393792 IRX6P78412 446 aaPredicted RBP28.45■■■□□ 2.14
UBTD2-201ENST00000393792 KIF21BO75037 1637 aa28.44■■■□□ 2.14
UBTD2-201ENST00000393792 ERICH6Q7L0X2 663 aa28.36■■■□□ 2.13
UBTD2-201ENST00000393792 CCNB3Q8WWL7 1395 aa28.33■■■□□ 2.13
UBTD2-201ENST00000393792 RAB3GAP2Q9H2M9 1393 aa28.29■■■□□ 2.12
UBTD2-201ENST00000393792 ARID3CA6NKF2 412 aa28.28■■■□□ 2.12
UBTD2-201ENST00000393792 ATAD2BQ9ULI0 1458 aa28.27■■■□□ 2.12
UBTD2-201ENST00000393792 ARAP1Q96P48 1450 aa28.25■■■□□ 2.11
UBTD2-201ENST00000393792 ANP32CO43423 234 aa28.25■■■□□ 2.11
UBTD2-201ENST00000393792 SENP3-EIF4A1A0A087X0R7 540 aa28.23■■■□□ 2.11
UBTD2-201ENST00000393792 UNC13AQ9UPW8 1703 aa28.22■■■□□ 2.11
UBTD2-201ENST00000393792 RBM19Q9Y4C8 960 aaKnown RBP28.21■■■□□ 2.11
UBTD2-201ENST00000393792 CLSPNQ9HAW4 1339 aa28.18■■■□□ 2.1
UBTD2-201ENST00000393792 POLR3GLQ9BT43 218 aa28.13■■■□□ 2.09
UBTD2-201ENST00000393792 HNRNPUQ00839 825 aaKnown RBP eCLIP28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms