RNA–Protein interactions for RNA: ENST00000409541.5

TMEM139-204, Transcript of transmembrane protein 139, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM139, Length 1,907 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-204ENST00000409541 NISCHQ9Y2I1 1504 aa25.81■■□□□ 1.72
TMEM139-204ENST00000409541 CCDC180Q9P1Z9 1646 aa22.25■■□□□ 1.15
TMEM139-204ENST00000409541 ABCC9O60706 1549 aa21.83■■□□□ 1.09
TMEM139-204ENST00000409541 ZCCHC6Q5VYS8 1495 aaKnown RBP21.75■■□□□ 1.07
TMEM139-204ENST00000409541 SHROOM4Q9ULL8 1493 aa21.49■■□□□ 1.03
TMEM139-204ENST00000409541 DCAF8L2P0C7V8 631 aa21.36■■□□□ 1.01
TMEM139-204ENST00000409541 DCAF1Q9Y4B6 1507 aa21.26■□□□□ 0.99
TMEM139-204ENST00000409541 SUPT5HO00267 1087 aaKnown RBP20.85■□□□□ 0.93
TMEM139-204ENST00000409541 MYO15BQ96JP2 1530 aa20.85■□□□□ 0.93
TMEM139-204ENST00000409541 RB1CC1Q8TDY2 1594 aa20.83■□□□□ 0.93
TMEM139-204ENST00000409541 NACADO15069 1562 aa20.71■□□□□ 0.91
TMEM139-204ENST00000409541 SCRIBQ14160 1630 aa20.65■□□□□ 0.9
TMEM139-204ENST00000409541 UNC13AQ9UPW8 1703 aa20.45■□□□□ 0.86
TMEM139-204ENST00000409541 PABPN1Q86U42 306 aaKnown RBP eCLIP20.34■□□□□ 0.85
TMEM139-204ENST00000409541 DNAJC5BQ9UF47 199 aa20.22■□□□□ 0.83
TMEM139-204ENST00000409541 BICRAQ9NZM4 1560 aa20.21■□□□□ 0.83
TMEM139-204ENST00000409541 RSF1Q96T23 1441 aaPredicted RBP20.2■□□□□ 0.82
TMEM139-204ENST00000409541 CHIC1Q5VXU3 224 aa20.09■□□□□ 0.81
TMEM139-204ENST00000409541 CECR2Q9BXF3 1484 aa20.08■□□□□ 0.81
TMEM139-204ENST00000409541 MROH2BQ7Z745 1585 aa19.99■□□□□ 0.79
TMEM139-204ENST00000409541 BAZ1AQ9NRL2 1556 aaPredicted RBP19.89■□□□□ 0.77
TMEM139-204ENST00000409541 WIZO95785 1651 aa19.85■□□□□ 0.77
TMEM139-204ENST00000409541 SMARCA4P51532 1647 aa19.76■□□□□ 0.75
TMEM139-204ENST00000409541 CC2D2AQ9P2K1 1620 aa19.72■□□□□ 0.75
TMEM139-204ENST00000409541 EIF4G1Q04637 1599 aaKnown RBP19.72■□□□□ 0.75
TMEM139-204ENST00000409541 TOP2AP11388 1531 aaKnown RBP19.61■□□□□ 0.73
TMEM139-204ENST00000409541 TRIM41Q8WV44 630 aa19.53■□□□□ 0.72
TMEM139-204ENST00000409541 SMARCA2P51531 1590 aa19.46■□□□□ 0.71
TMEM139-204ENST00000409541 CCDC88BA6NC98 1476 aa19.45■□□□□ 0.7
TMEM139-204ENST00000409541 PEG3Q9GZU2 1588 aa19.45■□□□□ 0.7
TMEM139-204ENST00000409541 LOC105371045A0A1W2PR82 267 aa19.39■□□□□ 0.7
TMEM139-204ENST00000409541 ATAD2BQ9ULI0 1458 aa19.35■□□□□ 0.69
TMEM139-204ENST00000409541 BAZ1BQ9UIG0 1483 aaKnown RBP19.28■□□□□ 0.68
TMEM139-204ENST00000409541 FAM9AQ8IZU1 332 aaPredicted RBP19.26■□□□□ 0.67
TMEM139-204ENST00000409541 ABCC8Q09428 1581 aa19.21■□□□□ 0.67
TMEM139-204ENST00000409541 NCAPD3P42695 1498 aa19.09■□□□□ 0.65
TMEM139-204ENST00000409541 HMGXB3Q12766 1538 aa19.08■□□□□ 0.65
TMEM139-204ENST00000409541 EHMT2Q96KQ7 1210 aa19.04■□□□□ 0.64
TMEM139-204ENST00000409541 WRNQ14191 1432 aaPredicted RBP eCLIP19.01■□□□□ 0.63
TMEM139-204ENST00000409541 SOGA1O94964 1423 aa18.93■□□□□ 0.62
TMEM139-204ENST00000409541 PCGF6Q9BYE7 350 aa18.92■□□□□ 0.62
TMEM139-204ENST00000409541 SYNJ1O43426 1573 aa18.91■□□□□ 0.62
TMEM139-204ENST00000409541 EEA1Q15075 1411 aa18.88■□□□□ 0.61
TMEM139-204ENST00000409541 ERCC6Q03468 1493 aa18.84■□□□□ 0.61
TMEM139-204ENST00000409541 RUSC2Q8N2Y8 1516 aa18.84■□□□□ 0.61
TMEM139-204ENST00000409541 CSRNP3Q8WYN3 585 aa18.81■□□□□ 0.6
TMEM139-204ENST00000409541 NESP48681 1621 aa18.81■□□□□ 0.6
TMEM139-204ENST00000409541 CFTRP13569 1480 aa18.79■□□□□ 0.6
TMEM139-204ENST00000409541 TOP2BQ02880 1626 aa18.77■□□□□ 0.6
TMEM139-204ENST00000409541 TRIM26Q12899 539 aaPredicted RBP18.76■□□□□ 0.59
TMEM139-204ENST00000409541 BIVM-ERCC5R4GMW8 1640 aa18.72■□□□□ 0.59
TMEM139-204ENST00000409541 TNIKQ9UKE5 1360 aa18.69■□□□□ 0.58
TMEM139-204ENST00000409541 GOLGA3Q08378 1498 aa18.69■□□□□ 0.58
TMEM139-204ENST00000409541 LAMC3Q9Y6N6 1575 aa18.68■□□□□ 0.58
TMEM139-204ENST00000409541 CADPSQ9ULU8 1353 aa18.66■□□□□ 0.58
TMEM139-204ENST00000409541 CUX1P39880 1505 aa18.66■□□□□ 0.58
TMEM139-204ENST00000409541 CUX2O14529 1486 aa18.66■□□□□ 0.58
TMEM139-204ENST00000409541 UBTFP17480 764 aaKnown RBP18.66■□□□□ 0.58
TMEM139-204ENST00000409541 CEP162Q5TB80 1403 aa18.66■□□□□ 0.58
TMEM139-204ENST00000409541 PRDM2Q13029 1718 aa18.64■□□□□ 0.57
TMEM139-204ENST00000409541 CEP164Q9UPV0 1460 aa18.64■□□□□ 0.57
TMEM139-204ENST00000409541 HRCP23327 699 aa18.64■□□□□ 0.57
TMEM139-204ENST00000409541 KIF21BO75037 1637 aa18.63■□□□□ 0.57
TMEM139-204ENST00000409541 KIF21AQ7Z4S6 1674 aa18.62■□□□□ 0.57
TMEM139-204ENST00000409541 THOC2Q8NI27 1593 aaKnown RBP18.57■□□□□ 0.56
TMEM139-204ENST00000409541 PDS5BQ9NTI5 1447 aa18.54■□□□□ 0.56
TMEM139-204ENST00000409541 RAPGEF2Q9Y4G8 1499 aa18.52■□□□□ 0.55
TMEM139-204ENST00000409541 PPARGC1BQ86YN6 1023 aaKnown RBP18.51■□□□□ 0.55
TMEM139-204ENST00000409541 KIF27Q86VH2 1401 aa18.48■□□□□ 0.55
TMEM139-204ENST00000409541 FANCD2Q9BXW9 1451 aa18.48■□□□□ 0.55
TMEM139-204ENST00000409541 PRXQ9BXM0 1461 aa18.44■□□□□ 0.54
TMEM139-204ENST00000409541 CLIP1P30622 1438 aa18.42■□□□□ 0.54
TMEM139-204ENST00000409541 ERICH3Q5RHP9 1530 aa18.42■□□□□ 0.54
TMEM139-204ENST00000409541 FGD5Q6ZNL6 1462 aa18.41■□□□□ 0.54
TMEM139-204ENST00000409541 MRC2Q9UBG0 1479 aa18.38■□□□□ 0.53
TMEM139-204ENST00000409541 DNAJC5Q9H3Z4 198 aa18.38■□□□□ 0.53
TMEM139-204ENST00000409541 DNMBPQ6XZF7 1577 aa18.34■□□□□ 0.53
TMEM139-204ENST00000409541 WDR62O43379 1518 aa18.33■□□□□ 0.53
TMEM139-204ENST00000409541 RANGAP1P46060 587 aaPredicted RBP18.33■□□□□ 0.52
TMEM139-204ENST00000409541 TTBK1Q5TCY1 1321 aaPredicted RBP18.32■□□□□ 0.52
TMEM139-204ENST00000409541 TOPBP1Q92547 1522 aa18.31■□□□□ 0.52
TMEM139-204ENST00000409541 VPS8Q8N3P4 1428 aa18.29■□□□□ 0.52
TMEM139-204ENST00000409541 IGF1RP08069 1367 aa18.28■□□□□ 0.52
TMEM139-204ENST00000409541 POLA1P09884 1462 aaPredicted RBP18.26■□□□□ 0.51
TMEM139-204ENST00000409541 RAD54L2Q9Y4B4 1467 aa18.24■□□□□ 0.51
TMEM139-204ENST00000409541 URB2Q14146 1524 aaKnown RBP18.22■□□□□ 0.51
TMEM139-204ENST00000409541 ABCA10Q8WWZ4 1543 aa18.21■□□□□ 0.51
TMEM139-204ENST00000409541 CARMIL1Q5VZK9 1371 aa18.2■□□□□ 0.5
TMEM139-204ENST00000409541 ARAP1Q96P48 1450 aa18.18■□□□□ 0.5
TMEM139-204ENST00000409541 ZEB1P37275 1124 aaPredicted RBP18.17■□□□□ 0.5
TMEM139-204ENST00000409541 APLP2Q06481 763 aa18.17■□□□□ 0.5
TMEM139-204ENST00000409541 ARHGAP35Q9NRY4 1499 aa18.11■□□□□ 0.49
TMEM139-204ENST00000409541 WDR97A6NE52 1622 aa18.1■□□□□ 0.49
TMEM139-204ENST00000409541 CUL7Q14999 1698 aa18.06■□□□□ 0.48
TMEM139-204ENST00000409541 TDRD9Q8NDG6 1382 aaKnown RBP18.04■□□□□ 0.48
TMEM139-204ENST00000409541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.04■□□□□ 0.48
TMEM139-204ENST00000409541 ABCA5Q8WWZ7 1642 aa18.03■□□□□ 0.48
TMEM139-204ENST00000409541 GAPVD1Q14C86 1478 aa18.01■□□□□ 0.47
TMEM139-204ENST00000409541 CCER1Q8TC90 406 aaPredicted RBP18.01■□□□□ 0.47
TMEM139-204ENST00000409541 TARBP1Q13395 1621 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms