RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 DCAF8L2P0C7V8 631 aa18.4■□□□□ 0.54
SLC6A4-201ENST00000261707 PELP1Q8IZL8 1130 aaKnown RBP17.58■□□□□ 0.4
SLC6A4-201ENST00000261707 MYT1Q01538 1121 aa17.23■□□□□ 0.35
SLC6A4-201ENST00000261707 SUPT5HO00267 1087 aaKnown RBP17■□□□□ 0.31
SLC6A4-201ENST00000261707 FAM9AQ8IZU1 332 aaPredicted RBP17■□□□□ 0.31
SLC6A4-201ENST00000261707 ERICH6Q7L0X2 663 aa16.95■□□□□ 0.3
SLC6A4-201ENST00000261707 CENPBP07199 599 aaPredicted RBP16.82■□□□□ 0.28
SLC6A4-201ENST00000261707 CCER1Q8TC90 406 aaPredicted RBP16.74■□□□□ 0.27
SLC6A4-201ENST00000261707 PCGF6Q9BYE7 350 aa16.65■□□□□ 0.26
SLC6A4-201ENST00000261707 EHMT2Q96KQ7 1210 aa16.65■□□□□ 0.26
SLC6A4-201ENST00000261707 ZEB1P37275 1124 aaPredicted RBP16.51■□□□□ 0.23
SLC6A4-201ENST00000261707 APLP2Q06481 763 aa16.42■□□□□ 0.22
SLC6A4-201ENST00000261707 SHROOM4Q9ULL8 1493 aa16.41■□□□□ 0.22
SLC6A4-201ENST00000261707 YTHDC1Q96MU7 727 aaKnown RBP16.31■□□□□ 0.2
SLC6A4-201ENST00000261707 NEFLP07196 543 aa16.3■□□□□ 0.2
SLC6A4-201ENST00000261707 TTBK1Q5TCY1 1321 aaPredicted RBP16.23■□□□□ 0.19
SLC6A4-201ENST00000261707 ATP1B4Q9UN42 357 aaPredicted RBP16.21■□□□□ 0.19
SLC6A4-201ENST00000261707 MYT1LQ9UL68 1186 aa16.19■□□□□ 0.18
SLC6A4-201ENST00000261707 RANGAP1P46060 587 aaPredicted RBP16.04■□□□□ 0.16
SLC6A4-201ENST00000261707 HRCP23327 699 aa16.01■□□□□ 0.15
SLC6A4-201ENST00000261707 DAXXQ9UER7 740 aaPredicted RBP15.91■□□□□ 0.14
SLC6A4-201ENST00000261707 CHIC1Q5VXU3 224 aa15.89■□□□□ 0.13
SLC6A4-201ENST00000261707 RTL5Q5HYW3 569 aaPredicted RBP15.79■□□□□ 0.12
SLC6A4-201ENST00000261707 NISCHQ9Y2I1 1504 aa15.79■□□□□ 0.12
SLC6A4-201ENST00000261707 TRIM26Q12899 539 aaPredicted RBP15.77■□□□□ 0.12
SLC6A4-201ENST00000261707 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.7■□□□□ 0.1
SLC6A4-201ENST00000261707 HNRNPUL2Q1KMD3 747 aaKnown RBP15.7■□□□□ 0.1
SLC6A4-201ENST00000261707 PPARGC1BQ86YN6 1023 aaKnown RBP15.68■□□□□ 0.1
SLC6A4-201ENST00000261707 TRIM41Q8WV44 630 aa15.67■□□□□ 0.1
SLC6A4-201ENST00000261707 ZNF316A6NFI3 1004 aaPredicted RBP15.57■□□□□ 0.08
SLC6A4-201ENST00000261707 SLC4A1APQ9BWU0 796 aaKnown RBP15.56■□□□□ 0.08
SLC6A4-201ENST00000261707 GTF3C3Q9Y5Q9 886 aa15.56■□□□□ 0.08
SLC6A4-201ENST00000261707 DIEXFQ68CQ4 756 aaKnown RBP15.52■□□□□ 0.07
SLC6A4-201ENST00000261707 UBTFP17480 764 aaKnown RBP15.51■□□□□ 0.07
SLC6A4-201ENST00000261707 POLR3GLQ9BT43 218 aa15.39■□□□□ 0.05
SLC6A4-201ENST00000261707 BCANQ96GW7 911 aa15.38■□□□□ 0.05
SLC6A4-201ENST00000261707 CDK11AQ9UQ88 783 aaPredicted RBP15.32■□□□□ 0.04
SLC6A4-201ENST00000261707 CLSPNQ9HAW4 1339 aa15.32■□□□□ 0.04
SLC6A4-201ENST00000261707 EIF5BO60841 1220 aaKnown RBP15.31■□□□□ 0.04
SLC6A4-201ENST00000261707 ACIN1Q9UKV3 1341 aaKnown RBP15.27■□□□□ 0.04
SLC6A4-201ENST00000261707 CNGB1Q14028 1251 aaPredicted RBP15.23■□□□□ 0.03
SLC6A4-201ENST00000261707 GLIPR1L2Q4G1C9 344 aa15.23■□□□□ 0.03
SLC6A4-201ENST00000261707 SLC24A1O60721 1099 aa15.22■□□□□ 0.03
SLC6A4-201ENST00000261707 LOC105371045A0A1W2PR82 267 aa15.2■□□□□ 0.02
SLC6A4-201ENST00000261707 PLPPR3Q6T4P5 718 aa15.2■□□□□ 0.02
SLC6A4-201ENST00000261707 ITGAEP38570 1179 aa15.2■□□□□ 0.02
SLC6A4-201ENST00000261707 ANP32AP39687 249 aaKnown RBP15.09■□□□□ 0.01
SLC6A4-201ENST00000261707 FBLN2P98095 1184 aa15.06■□□□□ 0
SLC6A4-201ENST00000261707 ESF1Q9H501 851 aaKnown RBP15.06■□□□□ 0
SLC6A4-201ENST00000261707 ANP32CO43423 234 aa14.98□□□□□ -0.01
SLC6A4-201ENST00000261707 NPM2Q86SE8 214 aaKnown RBP14.95□□□□□ -0.02
SLC6A4-201ENST00000261707 SCAF1Q9H7N4 1312 aaKnown RBP14.89□□□□□ -0.03
SLC6A4-201ENST00000261707 ANP32BQ92688 251 aaKnown RBP14.88□□□□□ -0.03
SLC6A4-201ENST00000261707 NBR1Q14596 966 aa14.88□□□□□ -0.03
SLC6A4-201ENST00000261707 FKBP8Q14318 412 aa14.87□□□□□ -0.03
SLC6A4-201ENST00000261707 ZBTB47Q9UFB7 747 aaPredicted RBP14.87□□□□□ -0.03
SLC6A4-201ENST00000261707 A0A0G2JS52 829 aa14.86□□□□□ -0.03
SLC6A4-201ENST00000261707 NEUROD1Q13562 356 aa14.83□□□□□ -0.04
SLC6A4-201ENST00000261707 BCL11AQ9H165 835 aa14.8□□□□□ -0.04
SLC6A4-201ENST00000261707 STAG3Q9UJ98 1225 aa14.78□□□□□ -0.04
SLC6A4-201ENST00000261707 CANXP27824 592 aaKnown RBP14.75□□□□□ -0.05
SLC6A4-201ENST00000261707 ANP32EQ9BTT0 268 aa14.75□□□□□ -0.05
SLC6A4-201ENST00000261707 NPM1P06748 294 aaKnown RBP eCLIP14.74□□□□□ -0.05
SLC6A4-201ENST00000261707 NEFMP07197 916 aa14.73□□□□□ -0.05
SLC6A4-201ENST00000261707 FAM50AQ14320 339 aaKnown RBP14.71□□□□□ -0.05
SLC6A4-201ENST00000261707 TRIM52Q96A61 297 aa14.7□□□□□ -0.06
SLC6A4-201ENST00000261707 ARXQ96QS3 562 aa14.65□□□□□ -0.06
SLC6A4-201ENST00000261707 HSP90AA1P07900 732 aaKnown RBP14.63□□□□□ -0.07
SLC6A4-201ENST00000261707 PABPN1Q86U42 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
SLC6A4-201ENST00000261707 UPF2Q9HAU5 1272 aaKnown RBP14.6□□□□□ -0.07
SLC6A4-201ENST00000261707 ZNF326Q5BKZ1 582 aaKnown RBP14.58□□□□□ -0.08
SLC6A4-201ENST00000261707 TNNT2P45379 298 aaPredicted RBP14.57□□□□□ -0.08
SLC6A4-201ENST00000261707 CHGAP10645 457 aaKnown RBP14.55□□□□□ -0.08
SLC6A4-201ENST00000261707 HNRNPUQ00839 825 aaKnown RBP eCLIP14.55□□□□□ -0.08
SLC6A4-201ENST00000261707 HAP1P54257 671 aaPredicted RBP14.54□□□□□ -0.08
SLC6A4-201ENST00000261707 PLEKHG5O94827 1062 aa14.53□□□□□ -0.08
SLC6A4-201ENST00000261707 CCDC136Q96JN2 1154 aa14.53□□□□□ -0.08
SLC6A4-201ENST00000261707 RTN4Q9NQC3 1192 aaKnown RBP14.51□□□□□ -0.09
SLC6A4-201ENST00000261707 C14orf37Q86TY3 774 aa14.51□□□□□ -0.09
SLC6A4-201ENST00000261707 ZBTB7CA1YPR0 619 aa14.49□□□□□ -0.09
SLC6A4-201ENST00000261707 ARID3CA6NKF2 412 aa14.49□□□□□ -0.09
SLC6A4-201ENST00000261707 TRIM44Q96DX7 344 aaPredicted RBP14.48□□□□□ -0.09
SLC6A4-201ENST00000261707 NAP1L5Q96NT1 182 aaPredicted RBP14.45□□□□□ -0.1
SLC6A4-201ENST00000261707 ERICH6BQ5W0A0 696 aa14.44□□□□□ -0.1
SLC6A4-201ENST00000261707 DDRGK1Q96HY6 314 aa14.44□□□□□ -0.1
SLC6A4-201ENST00000261707 FAM9BQ8IZU0 186 aa14.43□□□□□ -0.1
SLC6A4-201ENST00000261707 SENP3Q9H4L4 574 aaPredicted RBP14.43□□□□□ -0.1
SLC6A4-201ENST00000261707 TRHP20396 242 aaPredicted RBP14.43□□□□□ -0.1
SLC6A4-201ENST00000261707 IRX6P78412 446 aaPredicted RBP14.42□□□□□ -0.1
SLC6A4-201ENST00000261707 ZNF777Q9ULD5 760 aaPredicted RBP14.41□□□□□ -0.1
SLC6A4-201ENST00000261707 MIER1Q8N108 512 aa14.41□□□□□ -0.1
SLC6A4-201ENST00000261707 DDX10Q13206 875 aaKnown RBP14.4□□□□□ -0.1
SLC6A4-201ENST00000261707 ARID4BQ4LE39 1312 aaPredicted RBP14.39□□□□□ -0.11
SLC6A4-201ENST00000261707 AEBP2Q6ZN18 517 aaPredicted RBP14.37□□□□□ -0.11
SLC6A4-201ENST00000261707 CDK11BP21127 795 aaKnown RBP14.37□□□□□ -0.11
SLC6A4-201ENST00000261707 ABCC9O60706 1549 aa14.36□□□□□ -0.11
SLC6A4-201ENST00000261707 DCAF1Q9Y4B6 1507 aa14.34□□□□□ -0.11
SLC6A4-201ENST00000261707 NPHP1O15259 732 aa14.34□□□□□ -0.11
SLC6A4-201ENST00000261707 PPM1GO15355 546 aaPredicted RBP14.33□□□□□ -0.12
SLC6A4-201ENST00000261707 BECN1Q14457 450 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms