RNA–Protein interactions for RNA: ENST00000371546.8

GRIN1-202, Transcript of glutamate ionotropic receptor NMDA type subunit 1, humanhuman

TSL 5 BASIC

Gene GRIN1, Length 4,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN1-202ENST00000371546 NISCHQ9Y2I1 1504 aa25.6■■□□□ 1.69
GRIN1-202ENST00000371546 DCAF8L2P0C7V8 631 aa24.53■■□□□ 1.52
GRIN1-202ENST00000371546 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
GRIN1-202ENST00000371546 SUPT5HO00267 1087 aaKnown RBP24.16■■□□□ 1.46
GRIN1-202ENST00000371546 EHMT2Q96KQ7 1210 aa23.16■■□□□ 1.3
GRIN1-202ENST00000371546 PCGF6Q9BYE7 350 aa22.82■■□□□ 1.24
GRIN1-202ENST00000371546 FAM9AQ8IZU1 332 aaPredicted RBP22.67■■□□□ 1.22
GRIN1-202ENST00000371546 LOC105371045A0A1W2PR82 267 aa22.37■■□□□ 1.17
GRIN1-202ENST00000371546 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
GRIN1-202ENST00000371546 TTBK1Q5TCY1 1321 aaPredicted RBP22.31■■□□□ 1.16
GRIN1-202ENST00000371546 PPARGC1BQ86YN6 1023 aaKnown RBP22.17■■□□□ 1.14
GRIN1-202ENST00000371546 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
GRIN1-202ENST00000371546 HRCP23327 699 aa21.99■■□□□ 1.11
GRIN1-202ENST00000371546 RANGAP1P46060 587 aaPredicted RBP21.81■■□□□ 1.08
GRIN1-202ENST00000371546 TRIM26Q12899 539 aaPredicted RBP21.64■■□□□ 1.06
GRIN1-202ENST00000371546 CCER1Q8TC90 406 aaPredicted RBP21.58■■□□□ 1.04
GRIN1-202ENST00000371546 MYO15BQ96JP2 1530 aa21.5■■□□□ 1.03
GRIN1-202ENST00000371546 UBTFP17480 764 aaKnown RBP21.46■■□□□ 1.03
GRIN1-202ENST00000371546 ABCC9O60706 1549 aa21.43■■□□□ 1.02
GRIN1-202ENST00000371546 ZCCHC6Q5VYS8 1495 aaKnown RBP21.37■■□□□ 1.01
GRIN1-202ENST00000371546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.36■■□□□ 1.01
GRIN1-202ENST00000371546 ZEB1P37275 1124 aaPredicted RBP21.3■■□□□ 1
GRIN1-202ENST00000371546 APLP2Q06481 763 aa21.29■■□□□ 1
GRIN1-202ENST00000371546 YTHDC1Q96MU7 727 aaKnown RBP21.25■□□□□ 0.99
GRIN1-202ENST00000371546 PABPN1Q86U42 306 aaKnown RBP eCLIP21.12■□□□□ 0.97
GRIN1-202ENST00000371546 HNRNPUL2Q1KMD3 747 aaKnown RBP21.1■□□□□ 0.97
GRIN1-202ENST00000371546 ATP1B4Q9UN42 357 aaPredicted RBP20.99■□□□□ 0.95
GRIN1-202ENST00000371546 ITGAEP38570 1179 aa20.92■□□□□ 0.94
GRIN1-202ENST00000371546 SCRIBQ14160 1630 aa20.91■□□□□ 0.94
GRIN1-202ENST00000371546 CENPBP07199 599 aaPredicted RBP20.9■□□□□ 0.94
GRIN1-202ENST00000371546 DIEXFQ68CQ4 756 aaKnown RBP20.8■□□□□ 0.92
GRIN1-202ENST00000371546 PELP1Q8IZL8 1130 aaKnown RBP20.78■□□□□ 0.92
GRIN1-202ENST00000371546 DCAF1Q9Y4B6 1507 aa20.73■□□□□ 0.91
GRIN1-202ENST00000371546 CCDC180Q9P1Z9 1646 aa20.7■□□□□ 0.9
GRIN1-202ENST00000371546 RSF1Q96T23 1441 aaPredicted RBP20.69■□□□□ 0.9
GRIN1-202ENST00000371546 GTF3C3Q9Y5Q9 886 aa20.59■□□□□ 0.89
GRIN1-202ENST00000371546 CSRNP3Q8WYN3 585 aa20.55■□□□□ 0.88
GRIN1-202ENST00000371546 CECR2Q9BXF3 1484 aa20.48■□□□□ 0.87
GRIN1-202ENST00000371546 SCAF1Q9H7N4 1312 aaKnown RBP20.47■□□□□ 0.87
GRIN1-202ENST00000371546 NEUROD1Q13562 356 aa20.42■□□□□ 0.86
GRIN1-202ENST00000371546 ACIN1Q9UKV3 1341 aaKnown RBP20.37■□□□□ 0.85
GRIN1-202ENST00000371546 ZNF316A6NFI3 1004 aaPredicted RBP20.33■□□□□ 0.84
GRIN1-202ENST00000371546 CNGB1Q14028 1251 aaPredicted RBP20.33■□□□□ 0.84
GRIN1-202ENST00000371546 P3H3Q8IVL6 736 aa20.3■□□□□ 0.84
GRIN1-202ENST00000371546 RB1CC1Q8TDY2 1594 aa20.29■□□□□ 0.84
GRIN1-202ENST00000371546 FAM50AQ14320 339 aaKnown RBP20.25■□□□□ 0.83
GRIN1-202ENST00000371546 BCANQ96GW7 911 aa20.17■□□□□ 0.82
GRIN1-202ENST00000371546 MIER1Q8N108 512 aa20.15■□□□□ 0.82
GRIN1-202ENST00000371546 MROH2BQ7Z745 1585 aa20.14■□□□□ 0.82
GRIN1-202ENST00000371546 SOGA1O94964 1423 aa20.11■□□□□ 0.81
GRIN1-202ENST00000371546 CEP162Q5TB80 1403 aa20.09■□□□□ 0.81
GRIN1-202ENST00000371546 ARID3CA6NKF2 412 aa20.07■□□□□ 0.8
GRIN1-202ENST00000371546 POLR3GLQ9BT43 218 aa20.06■□□□□ 0.8
GRIN1-202ENST00000371546 HIRIP3Q9BW71 556 aaPredicted RBP20.01■□□□□ 0.79
GRIN1-202ENST00000371546 ABCC8Q09428 1581 aa20.01■□□□□ 0.79
GRIN1-202ENST00000371546 NEFLP07196 543 aa20■□□□□ 0.79
GRIN1-202ENST00000371546 CCDC88BA6NC98 1476 aa19.98■□□□□ 0.79
GRIN1-202ENST00000371546 MYT1Q01538 1121 aa19.93■□□□□ 0.78
GRIN1-202ENST00000371546 CLIP1P30622 1438 aa19.91■□□□□ 0.78
GRIN1-202ENST00000371546 WIZO95785 1651 aa19.91■□□□□ 0.78
GRIN1-202ENST00000371546 FBLN2P98095 1184 aa19.89■□□□□ 0.77
GRIN1-202ENST00000371546 DDX10Q13206 875 aaKnown RBP19.86■□□□□ 0.77
GRIN1-202ENST00000371546 WRNQ14191 1432 aaPredicted RBP eCLIP19.84■□□□□ 0.77
GRIN1-202ENST00000371546 TRIM52Q96A61 297 aa19.84■□□□□ 0.77
GRIN1-202ENST00000371546 RUSC2Q8N2Y8 1516 aa19.83■□□□□ 0.77
GRIN1-202ENST00000371546 TNIKQ9UKE5 1360 aa19.81■□□□□ 0.76
GRIN1-202ENST00000371546 NACADO15069 1562 aa19.81■□□□□ 0.76
GRIN1-202ENST00000371546 ERICH6Q7L0X2 663 aa19.75■□□□□ 0.75
GRIN1-202ENST00000371546 MYT1LQ9UL68 1186 aa19.75■□□□□ 0.75
GRIN1-202ENST00000371546 GOLGA3Q08378 1498 aa19.73■□□□□ 0.75
GRIN1-202ENST00000371546 KANK4Q5T7N3 995 aaPredicted RBP19.73■□□□□ 0.75
GRIN1-202ENST00000371546 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
GRIN1-202ENST00000371546 ZNF326Q5BKZ1 582 aaKnown RBP19.71■□□□□ 0.75
GRIN1-202ENST00000371546 CHIC2Q9UKJ5 165 aa19.68■□□□□ 0.74
GRIN1-202ENST00000371546 SIN3AQ96ST3 1273 aa19.66■□□□□ 0.74
GRIN1-202ENST00000371546 ANP32CO43423 234 aa19.64■□□□□ 0.73
GRIN1-202ENST00000371546 FKBP8Q14318 412 aa19.64■□□□□ 0.73
GRIN1-202ENST00000371546 SENP3-EIF4A1A0A087X0R7 540 aa19.61■□□□□ 0.73
GRIN1-202ENST00000371546 BAZ1BQ9UIG0 1483 aaKnown RBP19.56■□□□□ 0.72
GRIN1-202ENST00000371546 EEA1Q15075 1411 aa19.55■□□□□ 0.72
GRIN1-202ENST00000371546 IRX6P78412 446 aaPredicted RBP19.55■□□□□ 0.72
GRIN1-202ENST00000371546 CEP164Q9UPV0 1460 aa19.53■□□□□ 0.72
GRIN1-202ENST00000371546 ZNF777Q9ULD5 760 aaPredicted RBP19.49■□□□□ 0.71
GRIN1-202ENST00000371546 RRP7BPQ9NSQ0 103 aa19.47■□□□□ 0.71
GRIN1-202ENST00000371546 KCNH8Q96L42 1107 aa19.47■□□□□ 0.71
GRIN1-202ENST00000371546 HNRNPUQ00839 825 aaKnown RBP eCLIP19.45■□□□□ 0.7
GRIN1-202ENST00000371546 RAPGEF2Q9Y4G8 1499 aa19.44■□□□□ 0.7
GRIN1-202ENST00000371546 TONSLQ96HA7 1378 aa19.42■□□□□ 0.7
GRIN1-202ENST00000371546 FAM9BQ8IZU0 186 aa19.42■□□□□ 0.7
GRIN1-202ENST00000371546 VPS8Q8N3P4 1428 aa19.4■□□□□ 0.7
GRIN1-202ENST00000371546 TOP2AP11388 1531 aaKnown RBP19.37■□□□□ 0.69
GRIN1-202ENST00000371546 KIF27Q86VH2 1401 aa19.34■□□□□ 0.69
GRIN1-202ENST00000371546 SALL2Q9Y467 1007 aaPredicted RBP19.33■□□□□ 0.69
GRIN1-202ENST00000371546 SUPT16HQ9Y5B9 1047 aaKnown RBP19.33■□□□□ 0.69
GRIN1-202ENST00000371546 MTUS2Q5JR59 1369 aa19.31■□□□□ 0.68
GRIN1-202ENST00000371546 CCNB3Q8WWL7 1395 aa19.31■□□□□ 0.68
GRIN1-202ENST00000371546 SMARCA4P51532 1647 aa19.28■□□□□ 0.68
GRIN1-202ENST00000371546 SMARCA2P51531 1590 aa19.25■□□□□ 0.67
GRIN1-202ENST00000371546 CUX2O14529 1486 aa19.25■□□□□ 0.67
GRIN1-202ENST00000371546 FOXD1Q16676 465 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms