Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
SVIPQ8NHG7 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.44□□□□□ -0.42
SVIPQ8NHG7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SVIPQ8NHG7 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.44□□□□□ -0.42
SVIPQ8NHG7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SVIPQ8NHG7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SVIPQ8NHG7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC12.44□□□□□ -0.42
SVIPQ8NHG7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SVIPQ8NHG7 DNM1P41-201ENST00000623634 3350 ntBASIC12.44□□□□□ -0.42
SVIPQ8NHG7 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.44□□□□□ -0.42
SVIPQ8NHG7 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
SVIPQ8NHG7 HMGN1P19-201ENST00000436976 333 ntBASIC12.44□□□□□ -0.42
SVIPQ8NHG7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.44□□□□□ -0.42
SVIPQ8NHG7 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.44□□□□□ -0.42
SVIPQ8NHG7 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SVIPQ8NHG7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
SVIPQ8NHG7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SVIPQ8NHG7 CYP27C1-202ENST00000409327 2092 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SVIPQ8NHG7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SVIPQ8NHG7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SVIPQ8NHG7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SVIPQ8NHG7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
SVIPQ8NHG7 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SVIPQ8NHG7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.44□□□□□ -0.42
SVIPQ8NHG7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 LINC00893-215ENST00000618757 2347 ntTSL 2 BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 AC106788.1-201ENST00000550753 2661 ntTSL 2 BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SVIPQ8NHG7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 AC079781.5-202ENST00000641784 3743 ntBASIC12.42□□□□□ -0.42
SVIPQ8NHG7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 ZFAND6-220ENST00000561060 891 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SVIPQ8NHG7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms