RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 NISCHQ9Y2I1 1504 aa36.93■■■■□ 3.5
PRPF19-201ENST00000227524 CCDC180Q9P1Z9 1646 aa32.01■■■□□ 2.71
PRPF19-201ENST00000227524 ZCCHC6Q5VYS8 1495 aaKnown RBP31.09■■■□□ 2.57
PRPF19-201ENST00000227524 DCAF1Q9Y4B6 1507 aa30.47■■■□□ 2.47
PRPF19-201ENST00000227524 DCAF8L2P0C7V8 631 aa30.4■■■□□ 2.46
PRPF19-201ENST00000227524 SHROOM4Q9ULL8 1493 aa30.39■■■□□ 2.46
PRPF19-201ENST00000227524 ABCC9O60706 1549 aa30.11■■■□□ 2.41
PRPF19-201ENST00000227524 MYO15BQ96JP2 1530 aa29.99■■■□□ 2.39
PRPF19-201ENST00000227524 SUPT5HO00267 1087 aaKnown RBP29.91■■■□□ 2.38
PRPF19-201ENST00000227524 NACADO15069 1562 aa29.74■■■□□ 2.35
PRPF19-201ENST00000227524 SCRIBQ14160 1630 aa29.57■■■□□ 2.32
PRPF19-201ENST00000227524 RB1CC1Q8TDY2 1594 aa29.41■■■□□ 2.3
PRPF19-201ENST00000227524 CHIC1Q5VXU3 224 aa29.3■■■□□ 2.28
PRPF19-201ENST00000227524 HRCP23327 699 aa28.98■■■□□ 2.23
PRPF19-201ENST00000227524 UNC13AQ9UPW8 1703 aa28.98■■■□□ 2.23
PRPF19-201ENST00000227524 RSF1Q96T23 1441 aaPredicted RBP28.78■■■□□ 2.2
PRPF19-201ENST00000227524 CECR2Q9BXF3 1484 aa28.75■■■□□ 2.19
PRPF19-201ENST00000227524 PCGF6Q9BYE7 350 aa28.68■■■□□ 2.18
PRPF19-201ENST00000227524 BICRAQ9NZM4 1560 aa28.65■■■□□ 2.18
PRPF19-201ENST00000227524 MROH2BQ7Z745 1585 aa28.59■■■□□ 2.17
PRPF19-201ENST00000227524 PABPN1Q86U42 306 aaKnown RBP eCLIP28.47■■■□□ 2.15
PRPF19-201ENST00000227524 BAZ1AQ9NRL2 1556 aaPredicted RBP28.45■■■□□ 2.14
PRPF19-201ENST00000227524 LOC105371045A0A1W2PR82 267 aa28.4■■■□□ 2.14
PRPF19-201ENST00000227524 WIZO95785 1651 aa28.38■■■□□ 2.13
PRPF19-201ENST00000227524 SMARCA4P51532 1647 aa28.33■■■□□ 2.13
PRPF19-201ENST00000227524 PPARGC1BQ86YN6 1023 aaKnown RBP28.28■■■□□ 2.12
PRPF19-201ENST00000227524 TRIM26Q12899 539 aaPredicted RBP28.11■■■□□ 2.09
PRPF19-201ENST00000227524 TOP2AP11388 1531 aaKnown RBP28.01■■■□□ 2.08
PRPF19-201ENST00000227524 PEG3Q9GZU2 1588 aa27.97■■■□□ 2.07
PRPF19-201ENST00000227524 TRIM41Q8WV44 630 aa27.86■■■□□ 2.05
PRPF19-201ENST00000227524 SMARCA2P51531 1590 aa27.81■■■□□ 2.04
PRPF19-201ENST00000227524 ATAD2BQ9ULI0 1458 aa27.8■■■□□ 2.04
PRPF19-201ENST00000227524 CCDC88BA6NC98 1476 aa27.78■■■□□ 2.04
PRPF19-201ENST00000227524 EIF4G1Q04637 1599 aaKnown RBP27.74■■■□□ 2.03
PRPF19-201ENST00000227524 ZEB1P37275 1124 aaPredicted RBP27.66■■■□□ 2.02
PRPF19-201ENST00000227524 BAZ1BQ9UIG0 1483 aaKnown RBP27.62■■■□□ 2.01
PRPF19-201ENST00000227524 FAM9AQ8IZU1 332 aaPredicted RBP27.62■■■□□ 2.01
PRPF19-201ENST00000227524 NCAPD3P42695 1498 aa27.48■■□□□ 1.99
PRPF19-201ENST00000227524 HMGXB3Q12766 1538 aa27.46■■□□□ 1.99
PRPF19-201ENST00000227524 EHMT2Q96KQ7 1210 aa27.35■■□□□ 1.97
PRPF19-201ENST00000227524 ABCC8Q09428 1581 aa27.33■■□□□ 1.97
PRPF19-201ENST00000227524 CC2D2AQ9P2K1 1620 aa27.24■■□□□ 1.95
PRPF19-201ENST00000227524 DNAJC5BQ9UF47 199 aa27.24■■□□□ 1.95
PRPF19-201ENST00000227524 WRNQ14191 1432 aaPredicted RBP eCLIP27.04■■□□□ 1.92
PRPF19-201ENST00000227524 SYNJ1O43426 1573 aa26.99■■□□□ 1.91
PRPF19-201ENST00000227524 CFTRP13569 1480 aa26.97■■□□□ 1.91
PRPF19-201ENST00000227524 SCAF1Q9H7N4 1312 aaKnown RBP26.9■■□□□ 1.9
PRPF19-201ENST00000227524 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.88■■□□□ 1.89
PRPF19-201ENST00000227524 SOGA1O94964 1423 aa26.87■■□□□ 1.89
PRPF19-201ENST00000227524 CCER1Q8TC90 406 aaPredicted RBP26.84■■□□□ 1.89
PRPF19-201ENST00000227524 PRDM2Q13029 1718 aa26.83■■□□□ 1.89
PRPF19-201ENST00000227524 CEP162Q5TB80 1403 aa26.81■■□□□ 1.88
PRPF19-201ENST00000227524 TOP2BQ02880 1626 aa26.8■■□□□ 1.88
PRPF19-201ENST00000227524 CADPSQ9ULU8 1353 aa26.8■■□□□ 1.88
PRPF19-201ENST00000227524 RUSC2Q8N2Y8 1516 aa26.79■■□□□ 1.88
PRPF19-201ENST00000227524 BIVM-ERCC5R4GMW8 1640 aa26.77■■□□□ 1.88
PRPF19-201ENST00000227524 PELP1Q8IZL8 1130 aaKnown RBP26.76■■□□□ 1.87
PRPF19-201ENST00000227524 TNIKQ9UKE5 1360 aa26.73■■□□□ 1.87
PRPF19-201ENST00000227524 EEA1Q15075 1411 aa26.72■■□□□ 1.87
PRPF19-201ENST00000227524 CUX1P39880 1505 aa26.7■■□□□ 1.86
PRPF19-201ENST00000227524 CSRNP3Q8WYN3 585 aa26.61■■□□□ 1.85
PRPF19-201ENST00000227524 TTBK1Q5TCY1 1321 aaPredicted RBP26.58■■□□□ 1.85
PRPF19-201ENST00000227524 NESP48681 1621 aa26.57■■□□□ 1.84
PRPF19-201ENST00000227524 GOLGA3Q08378 1498 aa26.55■■□□□ 1.84
PRPF19-201ENST00000227524 ACIN1Q9UKV3 1341 aaKnown RBP26.55■■□□□ 1.84
PRPF19-201ENST00000227524 FANCD2Q9BXW9 1451 aa26.52■■□□□ 1.84
PRPF19-201ENST00000227524 DIEXFQ68CQ4 756 aaKnown RBP26.51■■□□□ 1.84
PRPF19-201ENST00000227524 UBTFP17480 764 aaKnown RBP26.48■■□□□ 1.83
PRPF19-201ENST00000227524 LAMC3Q9Y6N6 1575 aa26.48■■□□□ 1.83
PRPF19-201ENST00000227524 NEUROD1Q13562 356 aa26.46■■□□□ 1.83
PRPF19-201ENST00000227524 KIF21BO75037 1637 aa26.43■■□□□ 1.82
PRPF19-201ENST00000227524 CEP164Q9UPV0 1460 aa26.39■■□□□ 1.81
PRPF19-201ENST00000227524 FGD5Q6ZNL6 1462 aa26.34■■□□□ 1.81
PRPF19-201ENST00000227524 CENPBP07199 599 aaPredicted RBP26.33■■□□□ 1.81
PRPF19-201ENST00000227524 DNMBPQ6XZF7 1577 aa26.31■■□□□ 1.8
PRPF19-201ENST00000227524 RAPGEF2Q9Y4G8 1499 aa26.3■■□□□ 1.8
PRPF19-201ENST00000227524 KIF27Q86VH2 1401 aa26.29■■□□□ 1.8
PRPF19-201ENST00000227524 TOPBP1Q92547 1522 aa26.27■■□□□ 1.8
PRPF19-201ENST00000227524 ZNF316A6NFI3 1004 aaPredicted RBP26.26■■□□□ 1.79
PRPF19-201ENST00000227524 PRXQ9BXM0 1461 aa26.25■■□□□ 1.79
PRPF19-201ENST00000227524 PDS5BQ9NTI5 1447 aa26.24■■□□□ 1.79
PRPF19-201ENST00000227524 CLIP1P30622 1438 aa26.23■■□□□ 1.79
PRPF19-201ENST00000227524 KIF21AQ7Z4S6 1674 aa26.22■■□□□ 1.79
PRPF19-201ENST00000227524 URB2Q14146 1524 aaKnown RBP26.22■■□□□ 1.79
PRPF19-201ENST00000227524 GTF3C3Q9Y5Q9 886 aa26.22■■□□□ 1.79
PRPF19-201ENST00000227524 CUX2O14529 1486 aa26.21■■□□□ 1.79
PRPF19-201ENST00000227524 POLA1P09884 1462 aaPredicted RBP26.19■■□□□ 1.78
PRPF19-201ENST00000227524 ERICH3Q5RHP9 1530 aa26.19■■□□□ 1.78
PRPF19-201ENST00000227524 VPS8Q8N3P4 1428 aa26.18■■□□□ 1.78
PRPF19-201ENST00000227524 RAD54L2Q9Y4B4 1467 aa26.13■■□□□ 1.77
PRPF19-201ENST00000227524 IGF1RP08069 1367 aa26.1■■□□□ 1.77
PRPF19-201ENST00000227524 ABCA10Q8WWZ4 1543 aa26.09■■□□□ 1.77
PRPF19-201ENST00000227524 HNRNPUL2Q1KMD3 747 aaKnown RBP26.09■■□□□ 1.77
PRPF19-201ENST00000227524 WDR97A6NE52 1622 aa26.02■■□□□ 1.76
PRPF19-201ENST00000227524 APLP2Q06481 763 aa25.97■■□□□ 1.75
PRPF19-201ENST00000227524 CARMIL1Q5VZK9 1371 aa25.93■■□□□ 1.74
PRPF19-201ENST00000227524 MRC2Q9UBG0 1479 aa25.92■■□□□ 1.74
PRPF19-201ENST00000227524 MIER1Q8N108 512 aa25.9■■□□□ 1.74
PRPF19-201ENST00000227524 TARBP1Q13395 1621 aaKnown RBP25.89■■□□□ 1.73
PRPF19-201ENST00000227524 ABCA5Q8WWZ7 1642 aa25.89■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms