RNA–Protein interactions for RNA: ENST00000525929.1

PCDHA7-202, Transcript of protocadherin alpha 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA7, Length 5,221 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7-202ENST00000525929 DCAF8L2P0C7V8 631 aa30.13■■■□□ 2.41
PCDHA7-202ENST00000525929 SUPT5HO00267 1087 aaKnown RBP28.56■■■□□ 2.16
PCDHA7-202ENST00000525929 NISCHQ9Y2I1 1504 aa28.43■■■□□ 2.14
PCDHA7-202ENST00000525929 SHROOM4Q9ULL8 1493 aa27.95■■■□□ 2.06
PCDHA7-202ENST00000525929 EHMT2Q96KQ7 1210 aa27.6■■■□□ 2.01
PCDHA7-202ENST00000525929 APLP2Q06481 763 aa27.28■■□□□ 1.96
PCDHA7-202ENST00000525929 PELP1Q8IZL8 1130 aaKnown RBP27.15■■□□□ 1.94
PCDHA7-202ENST00000525929 FAM9AQ8IZU1 332 aaPredicted RBP26.95■■□□□ 1.91
PCDHA7-202ENST00000525929 TTBK1Q5TCY1 1321 aaPredicted RBP26.68■■□□□ 1.86
PCDHA7-202ENST00000525929 PCGF6Q9BYE7 350 aa26.62■■□□□ 1.85
PCDHA7-202ENST00000525929 TRIM41Q8WV44 630 aa26.48■■□□□ 1.83
PCDHA7-202ENST00000525929 RANGAP1P46060 587 aaPredicted RBP26.45■■□□□ 1.83
PCDHA7-202ENST00000525929 ZEB1P37275 1124 aaPredicted RBP26.29■■□□□ 1.8
PCDHA7-202ENST00000525929 ATP1B4Q9UN42 357 aaPredicted RBP26.28■■□□□ 1.8
PCDHA7-202ENST00000525929 CCER1Q8TC90 406 aaPredicted RBP26.25■■□□□ 1.79
PCDHA7-202ENST00000525929 UBTFP17480 764 aaKnown RBP26.22■■□□□ 1.79
PCDHA7-202ENST00000525929 CENPBP07199 599 aaPredicted RBP26.21■■□□□ 1.79
PCDHA7-202ENST00000525929 ERICH6Q7L0X2 663 aa25.94■■□□□ 1.74
PCDHA7-202ENST00000525929 NEFLP07196 543 aa25.71■■□□□ 1.71
PCDHA7-202ENST00000525929 PPARGC1BQ86YN6 1023 aaKnown RBP25.64■■□□□ 1.7
PCDHA7-202ENST00000525929 YTHDC1Q96MU7 727 aaKnown RBP25.59■■□□□ 1.69
PCDHA7-202ENST00000525929 TRIM26Q12899 539 aaPredicted RBP25.53■■□□□ 1.68
PCDHA7-202ENST00000525929 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.38■■□□□ 1.65
PCDHA7-202ENST00000525929 HNRNPUL2Q1KMD3 747 aaKnown RBP25.38■■□□□ 1.65
PCDHA7-202ENST00000525929 ITGAEP38570 1179 aa25.36■■□□□ 1.65
PCDHA7-202ENST00000525929 MYT1LQ9UL68 1186 aa25.32■■□□□ 1.64
PCDHA7-202ENST00000525929 LOC105371045A0A1W2PR82 267 aa25.23■■□□□ 1.63
PCDHA7-202ENST00000525929 CHIC1Q5VXU3 224 aa25.22■■□□□ 1.63
PCDHA7-202ENST00000525929 POLR3GLQ9BT43 218 aa25.18■■□□□ 1.62
PCDHA7-202ENST00000525929 HRCP23327 699 aa25.17■■□□□ 1.62
PCDHA7-202ENST00000525929 MYT1Q01538 1121 aa24.99■■□□□ 1.59
PCDHA7-202ENST00000525929 DAXXQ9UER7 740 aaPredicted RBP24.97■■□□□ 1.59
PCDHA7-202ENST00000525929 CNGB1Q14028 1251 aaPredicted RBP24.89■■□□□ 1.58
PCDHA7-202ENST00000525929 SLC4A1APQ9BWU0 796 aaKnown RBP24.73■■□□□ 1.55
PCDHA7-202ENST00000525929 FAM50AQ14320 339 aaKnown RBP24.72■■□□□ 1.55
PCDHA7-202ENST00000525929 PABPN1Q86U42 306 aaKnown RBP eCLIP24.7■■□□□ 1.55
PCDHA7-202ENST00000525929 ABCC9O60706 1549 aa24.63■■□□□ 1.53
PCDHA7-202ENST00000525929 DIEXFQ68CQ4 756 aaKnown RBP24.63■■□□□ 1.53
PCDHA7-202ENST00000525929 TRIM52Q96A61 297 aa24.61■■□□□ 1.53
PCDHA7-202ENST00000525929 CLSPNQ9HAW4 1339 aa24.48■■□□□ 1.51
PCDHA7-202ENST00000525929 NEUROD1Q13562 356 aa24.48■■□□□ 1.51
PCDHA7-202ENST00000525929 ZNF316A6NFI3 1004 aaPredicted RBP24.36■■□□□ 1.49
PCDHA7-202ENST00000525929 FBLN2P98095 1184 aa24.33■■□□□ 1.49
PCDHA7-202ENST00000525929 RTL5Q5HYW3 569 aaPredicted RBP24.32■■□□□ 1.48
PCDHA7-202ENST00000525929 ZNF326Q5BKZ1 582 aaKnown RBP24.31■■□□□ 1.48
PCDHA7-202ENST00000525929 ANP32CO43423 234 aa24.27■■□□□ 1.48
PCDHA7-202ENST00000525929 CSRNP3Q8WYN3 585 aa24.15■■□□□ 1.46
PCDHA7-202ENST00000525929 P3H3Q8IVL6 736 aa24.11■■□□□ 1.45
PCDHA7-202ENST00000525929 BCANQ96GW7 911 aa24.09■■□□□ 1.45
PCDHA7-202ENST00000525929 ZBTB47Q9UFB7 747 aaPredicted RBP24.07■■□□□ 1.44
PCDHA7-202ENST00000525929 ARID3CA6NKF2 412 aa24.03■■□□□ 1.44
PCDHA7-202ENST00000525929 GTF3C3Q9Y5Q9 886 aa24.02■■□□□ 1.44
PCDHA7-202ENST00000525929 CDK11AQ9UQ88 783 aaPredicted RBP24■■□□□ 1.43
PCDHA7-202ENST00000525929 NEFMP07197 916 aa23.95■■□□□ 1.42
PCDHA7-202ENST00000525929 ZNF777Q9ULD5 760 aaPredicted RBP23.95■■□□□ 1.42
PCDHA7-202ENST00000525929 CANXP27824 592 aaKnown RBP23.92■■□□□ 1.42
PCDHA7-202ENST00000525929 SLC24A1O60721 1099 aa23.88■■□□□ 1.41
PCDHA7-202ENST00000525929 BCL11AQ9H165 835 aa23.77■■□□□ 1.4
PCDHA7-202ENST00000525929 ESF1Q9H501 851 aaKnown RBP23.7■■□□□ 1.39
PCDHA7-202ENST00000525929 SCRIBQ14160 1630 aa23.69■■□□□ 1.38
PCDHA7-202ENST00000525929 TONSLQ96HA7 1378 aa23.68■■□□□ 1.38
PCDHA7-202ENST00000525929 ACIN1Q9UKV3 1341 aaKnown RBP23.67■■□□□ 1.38
PCDHA7-202ENST00000525929 CHGAP10645 457 aaKnown RBP23.62■■□□□ 1.37
PCDHA7-202ENST00000525929 ANP32AP39687 249 aaKnown RBP23.6■■□□□ 1.37
PCDHA7-202ENST00000525929 NPM1P06748 294 aaKnown RBP eCLIP23.59■■□□□ 1.37
PCDHA7-202ENST00000525929 STAG3Q9UJ98 1225 aa23.59■■□□□ 1.37
PCDHA7-202ENST00000525929 DDX10Q13206 875 aaKnown RBP23.49■■□□□ 1.35
PCDHA7-202ENST00000525929 HNRNPUQ00839 825 aaKnown RBP eCLIP23.48■■□□□ 1.35
PCDHA7-202ENST00000525929 CHIC2Q9UKJ5 165 aa23.47■■□□□ 1.35
PCDHA7-202ENST00000525929 NPM2Q86SE8 214 aaKnown RBP23.46■■□□□ 1.35
PCDHA7-202ENST00000525929 ZCCHC6Q5VYS8 1495 aaKnown RBP23.46■■□□□ 1.35
PCDHA7-202ENST00000525929 FKBP8Q14318 412 aa23.44■■□□□ 1.34
PCDHA7-202ENST00000525929 FAM9BQ8IZU0 186 aa23.44■■□□□ 1.34
PCDHA7-202ENST00000525929 TSPY4P0CV99 314 aa23.42■■□□□ 1.34
PCDHA7-202ENST00000525929 TSPY10P0CW01 314 aa23.42■■□□□ 1.34
PCDHA7-202ENST00000525929 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.42■■□□□ 1.34
PCDHA7-202ENST00000525929 DCAF1Q9Y4B6 1507 aa23.41■■□□□ 1.34
PCDHA7-202ENST00000525929 TMC1Q8TDI8 760 aa23.36■■□□□ 1.33
PCDHA7-202ENST00000525929 PLPPR3Q6T4P5 718 aa23.35■■□□□ 1.33
PCDHA7-202ENST00000525929 CCDC180Q9P1Z9 1646 aa23.35■■□□□ 1.33
PCDHA7-202ENST00000525929 MTUS2Q5JR59 1369 aa23.35■■□□□ 1.33
PCDHA7-202ENST00000525929 SALL2Q9Y467 1007 aaPredicted RBP23.34■■□□□ 1.33
PCDHA7-202ENST00000525929 UPF2Q9HAU5 1272 aaKnown RBP23.33■■□□□ 1.33
PCDHA7-202ENST00000525929 HSP90AA1P07900 732 aaKnown RBP23.32■■□□□ 1.32
PCDHA7-202ENST00000525929 CHMP7Q8WUX9 453 aaPredicted RBP23.29■■□□□ 1.32
PCDHA7-202ENST00000525929 KDM2AQ9Y2K7 1162 aa23.27■■□□□ 1.32
PCDHA7-202ENST00000525929 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.25■■□□□ 1.31
PCDHA7-202ENST00000525929 WDR43Q15061 677 aaKnown RBP eCLIP23.25■■□□□ 1.31
PCDHA7-202ENST00000525929 ANP32BQ92688 251 aaKnown RBP23.24■■□□□ 1.31
PCDHA7-202ENST00000525929 MRS2Q9HD23 443 aa23.23■■□□□ 1.31
PCDHA7-202ENST00000525929 CCDC136Q96JN2 1154 aa23.22■■□□□ 1.31
PCDHA7-202ENST00000525929 CLIP1P30622 1438 aa23.22■■□□□ 1.31
PCDHA7-202ENST00000525929 EIF4G2P78344 907 aaKnown RBP eCLIP23.13■■□□□ 1.29
PCDHA7-202ENST00000525929 RRP7BPQ9NSQ0 103 aa23.11■■□□□ 1.29
PCDHA7-202ENST00000525929 PLEKHD1A6NEE1 506 aa23.07■■□□□ 1.28
PCDHA7-202ENST00000525929 HIRIP3Q9BW71 556 aaPredicted RBP23.06■■□□□ 1.28
PCDHA7-202ENST00000525929 RSF1Q96T23 1441 aaPredicted RBP23.05■■□□□ 1.28
PCDHA7-202ENST00000525929 EEA1Q15075 1411 aa23.05■■□□□ 1.28
PCDHA7-202ENST00000525929 KCNH8Q96L42 1107 aa23.04■■□□□ 1.28
PCDHA7-202ENST00000525929 MIER1Q8N108 512 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms