RNA–Protein interactions for RNA: ENST00000331837.5

NDN-201, Transcript of necdin, MAGE family member, humanhuman

APPRIS P1 BASIC

Gene NDN, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDN-201ENST00000331837 NISCHQ9Y2I1 1504 aa41.84■■■■■ 4.29
NDN-201ENST00000331837 CCDC180Q9P1Z9 1646 aa36.47■■■■□ 3.43
NDN-201ENST00000331837 ZCCHC6Q5VYS8 1495 aaKnown RBP35.14■■■■□ 3.22
NDN-201ENST00000331837 DCAF8L2P0C7V8 631 aa34.69■■■■□ 3.14
NDN-201ENST00000331837 ABCC9O60706 1549 aa34.57■■■■□ 3.12
NDN-201ENST00000331837 DCAF1Q9Y4B6 1507 aa34.5■■■■□ 3.11
NDN-201ENST00000331837 SHROOM4Q9ULL8 1493 aa34.32■■■■□ 3.08
NDN-201ENST00000331837 MYO15BQ96JP2 1530 aa34.05■■■■□ 3.04
NDN-201ENST00000331837 NACADO15069 1562 aa33.93■■■■□ 3.02
NDN-201ENST00000331837 RB1CC1Q8TDY2 1594 aa33.67■■■□□ 2.98
NDN-201ENST00000331837 SCRIBQ14160 1630 aa33.66■■■□□ 2.98
NDN-201ENST00000331837 UNC13AQ9UPW8 1703 aa33.14■■■□□ 2.9
NDN-201ENST00000331837 SUPT5HO00267 1087 aaKnown RBP32.99■■■□□ 2.87
NDN-201ENST00000331837 BICRAQ9NZM4 1560 aa32.69■■■□□ 2.82
NDN-201ENST00000331837 PABPN1Q86U42 306 aaKnown RBP eCLIP32.62■■■□□ 2.81
NDN-201ENST00000331837 CECR2Q9BXF3 1484 aa32.58■■■□□ 2.81
NDN-201ENST00000331837 RSF1Q96T23 1441 aaPredicted RBP32.47■■■□□ 2.79
NDN-201ENST00000331837 MROH2BQ7Z745 1585 aa32.37■■■□□ 2.77
NDN-201ENST00000331837 BAZ1AQ9NRL2 1556 aaPredicted RBP32.29■■■□□ 2.76
NDN-201ENST00000331837 SMARCA4P51532 1647 aa32.2■■■□□ 2.75
NDN-201ENST00000331837 WIZO95785 1651 aa32.17■■■□□ 2.74
NDN-201ENST00000331837 TOP2AP11388 1531 aaKnown RBP31.74■■■□□ 2.67
NDN-201ENST00000331837 PEG3Q9GZU2 1588 aa31.72■■■□□ 2.67
NDN-201ENST00000331837 EIF4G1Q04637 1599 aaKnown RBP31.7■■■□□ 2.67
NDN-201ENST00000331837 ATAD2BQ9ULI0 1458 aa31.62■■■□□ 2.65
NDN-201ENST00000331837 SMARCA2P51531 1590 aa31.59■■■□□ 2.65
NDN-201ENST00000331837 CHIC1Q5VXU3 224 aa31.52■■■□□ 2.64
NDN-201ENST00000331837 BAZ1BQ9UIG0 1483 aaKnown RBP31.48■■■□□ 2.63
NDN-201ENST00000331837 CCDC88BA6NC98 1476 aa31.45■■■□□ 2.63
NDN-201ENST00000331837 NCAPD3P42695 1498 aa31.29■■■□□ 2.6
NDN-201ENST00000331837 HMGXB3Q12766 1538 aa31.28■■■□□ 2.6
NDN-201ENST00000331837 CC2D2AQ9P2K1 1620 aa31.26■■■□□ 2.6
NDN-201ENST00000331837 TRIM41Q8WV44 630 aa30.95■■■□□ 2.55
NDN-201ENST00000331837 ABCC8Q09428 1581 aa30.87■■■□□ 2.53
NDN-201ENST00000331837 CFTRP13569 1480 aa30.63■■■□□ 2.49
NDN-201ENST00000331837 PRDM2Q13029 1718 aa30.59■■■□□ 2.49
NDN-201ENST00000331837 WRNQ14191 1432 aaPredicted RBP eCLIP30.57■■■□□ 2.48
NDN-201ENST00000331837 CADPSQ9ULU8 1353 aa30.52■■■□□ 2.48
NDN-201ENST00000331837 DNAJC5BQ9UF47 199 aa30.52■■■□□ 2.48
NDN-201ENST00000331837 SYNJ1O43426 1573 aa30.51■■■□□ 2.47
NDN-201ENST00000331837 FAM9AQ8IZU1 332 aaPredicted RBP30.49■■■□□ 2.47
NDN-201ENST00000331837 LOC105371045A0A1W2PR82 267 aa30.39■■■□□ 2.46
NDN-201ENST00000331837 NESP48681 1621 aa30.36■■■□□ 2.45
NDN-201ENST00000331837 TOP2BQ02880 1626 aa30.33■■■□□ 2.45
NDN-201ENST00000331837 BIVM-ERCC5R4GMW8 1640 aa30.31■■■□□ 2.44
NDN-201ENST00000331837 LAMC3Q9Y6N6 1575 aa30.27■■■□□ 2.44
NDN-201ENST00000331837 CUX1P39880 1505 aa30.27■■■□□ 2.44
NDN-201ENST00000331837 SOGA1O94964 1423 aa30.25■■■□□ 2.43
NDN-201ENST00000331837 FANCD2Q9BXW9 1451 aa30.24■■■□□ 2.43
NDN-201ENST00000331837 RUSC2Q8N2Y8 1516 aa30.17■■■□□ 2.42
NDN-201ENST00000331837 EHMT2Q96KQ7 1210 aa30.15■■■□□ 2.42
NDN-201ENST00000331837 EEA1Q15075 1411 aa30.07■■■□□ 2.4
NDN-201ENST00000331837 CEP164Q9UPV0 1460 aa30.03■■■□□ 2.4
NDN-201ENST00000331837 KIF21AQ7Z4S6 1674 aa30.03■■■□□ 2.4
NDN-201ENST00000331837 PDS5BQ9NTI5 1447 aa30.02■■■□□ 2.4
NDN-201ENST00000331837 CSRNP3Q8WYN3 585 aa29.98■■■□□ 2.39
NDN-201ENST00000331837 DNMBPQ6XZF7 1577 aa29.96■■■□□ 2.39
NDN-201ENST00000331837 FGD5Q6ZNL6 1462 aa29.94■■■□□ 2.38
NDN-201ENST00000331837 TOPBP1Q92547 1522 aa29.91■■■□□ 2.38
NDN-201ENST00000331837 URB2Q14146 1524 aaKnown RBP29.88■■■□□ 2.37
NDN-201ENST00000331837 KIF27Q86VH2 1401 aa29.77■■■□□ 2.36
NDN-201ENST00000331837 POLA1P09884 1462 aaPredicted RBP29.77■■■□□ 2.36
NDN-201ENST00000331837 KIF21BO75037 1637 aa29.76■■■□□ 2.35
NDN-201ENST00000331837 CUX2O14529 1486 aa29.74■■■□□ 2.35
NDN-201ENST00000331837 GOLGA3Q08378 1498 aa29.73■■■□□ 2.35
NDN-201ENST00000331837 RAD54L2Q9Y4B4 1467 aa29.72■■■□□ 2.35
NDN-201ENST00000331837 MRC2Q9UBG0 1479 aa29.66■■■□□ 2.34
NDN-201ENST00000331837 UBTFP17480 764 aaKnown RBP29.66■■■□□ 2.34
NDN-201ENST00000331837 RAPGEF2Q9Y4G8 1499 aa29.62■■■□□ 2.33
NDN-201ENST00000331837 ABCA10Q8WWZ4 1543 aa29.62■■■□□ 2.33
NDN-201ENST00000331837 TNIKQ9UKE5 1360 aa29.61■■■□□ 2.33
NDN-201ENST00000331837 ERCC6Q03468 1493 aa29.61■■■□□ 2.33
NDN-201ENST00000331837 WDR97A6NE52 1622 aa29.59■■■□□ 2.33
NDN-201ENST00000331837 PRXQ9BXM0 1461 aa29.57■■■□□ 2.32
NDN-201ENST00000331837 ERICH3Q5RHP9 1530 aa29.52■■■□□ 2.32
NDN-201ENST00000331837 CEP162Q5TB80 1403 aa29.51■■■□□ 2.31
NDN-201ENST00000331837 IGF1RP08069 1367 aa29.51■■■□□ 2.31
NDN-201ENST00000331837 WDR62O43379 1518 aa29.5■■■□□ 2.31
NDN-201ENST00000331837 TARBP1Q13395 1621 aaKnown RBP29.47■■■□□ 2.31
NDN-201ENST00000331837 THOC2Q8NI27 1593 aaKnown RBP29.46■■■□□ 2.31
NDN-201ENST00000331837 TDRD9Q8NDG6 1382 aaKnown RBP29.42■■■□□ 2.3
NDN-201ENST00000331837 ABCA5Q8WWZ7 1642 aa29.41■■■□□ 2.3
NDN-201ENST00000331837 CARMIL1Q5VZK9 1371 aa29.38■■■□□ 2.29
NDN-201ENST00000331837 GAPVD1Q14C86 1478 aa29.34■■■□□ 2.29
NDN-201ENST00000331837 CUL7Q14999 1698 aa29.31■■■□□ 2.28
NDN-201ENST00000331837 RANGAP1P46060 587 aaPredicted RBP29.29■■■□□ 2.28
NDN-201ENST00000331837 IFT140Q96RY7 1462 aa29.28■■■□□ 2.28
NDN-201ENST00000331837 CLIP1P30622 1438 aa29.28■■■□□ 2.28
NDN-201ENST00000331837 PBRM1Q86U86 1689 aa29.26■■■□□ 2.27
NDN-201ENST00000331837 AQRO60306 1485 aaKnown RBP eCLIP29.23■■■□□ 2.27
NDN-201ENST00000331837 ZNF608Q9ULD9 1512 aaPredicted RBP29.21■■■□□ 2.27
NDN-201ENST00000331837 EIF4G3O43432 1585 aaKnown RBP29.11■■■□□ 2.25
NDN-201ENST00000331837 GRIN2BQ13224 1484 aa29.08■■■□□ 2.25
NDN-201ENST00000331837 CTTNBP2Q8WZ74 1663 aa29.06■■■□□ 2.24
NDN-201ENST00000331837 PPARGC1BQ86YN6 1023 aaKnown RBP29.05■■■□□ 2.24
NDN-201ENST00000331837 ADAMTS12P58397 1594 aa29.04■■■□□ 2.24
NDN-201ENST00000331837 PCGF6Q9BYE7 350 aa29.01■■■□□ 2.23
NDN-201ENST00000331837 ARAP1Q96P48 1450 aa29■■■□□ 2.23
NDN-201ENST00000331837 VPS8Q8N3P4 1428 aa29■■■□□ 2.23
NDN-201ENST00000331837 FHAD1B1AJZ9 1412 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms