RNA–Protein interactions for RNA: ENST00000538261.7

CLDN7-203, Transcript of claudin 7, humanhuman

TSL 5 BASIC

Gene CLDN7, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-203ENST00000538261 NISCHQ9Y2I1 1504 aa39.66■■■■□ 3.94
CLDN7-203ENST00000538261 CCDC180Q9P1Z9 1646 aa34.65■■■■□ 3.14
CLDN7-203ENST00000538261 ZCCHC6Q5VYS8 1495 aaKnown RBP33.34■■■□□ 2.93
CLDN7-203ENST00000538261 DCAF1Q9Y4B6 1507 aa32.82■■■□□ 2.84
CLDN7-203ENST00000538261 ABCC9O60706 1549 aa32.74■■■□□ 2.83
CLDN7-203ENST00000538261 DCAF8L2P0C7V8 631 aa32.58■■■□□ 2.81
CLDN7-203ENST00000538261 MYO15BQ96JP2 1530 aa32.46■■■□□ 2.79
CLDN7-203ENST00000538261 NACADO15069 1562 aa32.25■■■□□ 2.75
CLDN7-203ENST00000538261 SHROOM4Q9ULL8 1493 aa32.22■■■□□ 2.75
CLDN7-203ENST00000538261 RB1CC1Q8TDY2 1594 aa31.97■■■□□ 2.71
CLDN7-203ENST00000538261 SCRIBQ14160 1630 aa31.82■■■□□ 2.68
CLDN7-203ENST00000538261 UNC13AQ9UPW8 1703 aa31.41■■■□□ 2.62
CLDN7-203ENST00000538261 BICRAQ9NZM4 1560 aa31.08■■■□□ 2.57
CLDN7-203ENST00000538261 SUPT5HO00267 1087 aaKnown RBP30.92■■■□□ 2.54
CLDN7-203ENST00000538261 PABPN1Q86U42 306 aaKnown RBP eCLIP30.82■■■□□ 2.52
CLDN7-203ENST00000538261 CECR2Q9BXF3 1484 aa30.81■■■□□ 2.52
CLDN7-203ENST00000538261 RSF1Q96T23 1441 aaPredicted RBP30.73■■■□□ 2.51
CLDN7-203ENST00000538261 MROH2BQ7Z745 1585 aa30.64■■■□□ 2.5
CLDN7-203ENST00000538261 BAZ1AQ9NRL2 1556 aaPredicted RBP30.62■■■□□ 2.49
CLDN7-203ENST00000538261 SMARCA4P51532 1647 aa30.52■■■□□ 2.48
CLDN7-203ENST00000538261 WIZO95785 1651 aa30.4■■■□□ 2.46
CLDN7-203ENST00000538261 PEG3Q9GZU2 1588 aa30.18■■■□□ 2.42
CLDN7-203ENST00000538261 EIF4G1Q04637 1599 aaKnown RBP30.11■■■□□ 2.41
CLDN7-203ENST00000538261 TOP2AP11388 1531 aaKnown RBP30.08■■■□□ 2.41
CLDN7-203ENST00000538261 ATAD2BQ9ULI0 1458 aa30.01■■■□□ 2.39
CLDN7-203ENST00000538261 SMARCA2P51531 1590 aa29.98■■■□□ 2.39
CLDN7-203ENST00000538261 BAZ1BQ9UIG0 1483 aaKnown RBP29.82■■■□□ 2.36
CLDN7-203ENST00000538261 NCAPD3P42695 1498 aa29.75■■■□□ 2.35
CLDN7-203ENST00000538261 HMGXB3Q12766 1538 aa29.75■■■□□ 2.35
CLDN7-203ENST00000538261 CCDC88BA6NC98 1476 aa29.74■■■□□ 2.35
CLDN7-203ENST00000538261 CC2D2AQ9P2K1 1620 aa29.67■■■□□ 2.34
CLDN7-203ENST00000538261 CHIC1Q5VXU3 224 aa29.61■■■□□ 2.33
CLDN7-203ENST00000538261 ABCC8Q09428 1581 aa29.11■■■□□ 2.25
CLDN7-203ENST00000538261 CFTRP13569 1480 aa29.09■■■□□ 2.25
CLDN7-203ENST00000538261 TRIM41Q8WV44 630 aa29.08■■■□□ 2.25
CLDN7-203ENST00000538261 PRDM2Q13029 1718 aa28.99■■■□□ 2.23
CLDN7-203ENST00000538261 CADPSQ9ULU8 1353 aa28.96■■■□□ 2.23
CLDN7-203ENST00000538261 DNAJC5BQ9UF47 199 aa28.92■■■□□ 2.22
CLDN7-203ENST00000538261 WRNQ14191 1432 aaPredicted RBP eCLIP28.9■■■□□ 2.22
CLDN7-203ENST00000538261 SYNJ1O43426 1573 aa28.85■■■□□ 2.21
CLDN7-203ENST00000538261 LAMC3Q9Y6N6 1575 aa28.76■■■□□ 2.19
CLDN7-203ENST00000538261 NESP48681 1621 aa28.76■■■□□ 2.19
CLDN7-203ENST00000538261 TOP2BQ02880 1626 aa28.72■■■□□ 2.19
CLDN7-203ENST00000538261 BIVM-ERCC5R4GMW8 1640 aa28.72■■■□□ 2.19
CLDN7-203ENST00000538261 CUX1P39880 1505 aa28.66■■■□□ 2.18
CLDN7-203ENST00000538261 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
CLDN7-203ENST00000538261 SOGA1O94964 1423 aa28.53■■■□□ 2.16
CLDN7-203ENST00000538261 FAM9AQ8IZU1 332 aaPredicted RBP28.53■■■□□ 2.16
CLDN7-203ENST00000538261 PDS5BQ9NTI5 1447 aa28.48■■■□□ 2.15
CLDN7-203ENST00000538261 CEP164Q9UPV0 1460 aa28.48■■■□□ 2.15
CLDN7-203ENST00000538261 KIF21AQ7Z4S6 1674 aa28.45■■■□□ 2.14
CLDN7-203ENST00000538261 RUSC2Q8N2Y8 1516 aa28.44■■■□□ 2.14
CLDN7-203ENST00000538261 LOC105371045A0A1W2PR82 267 aa28.44■■■□□ 2.14
CLDN7-203ENST00000538261 EEA1Q15075 1411 aa28.44■■■□□ 2.14
CLDN7-203ENST00000538261 DNMBPQ6XZF7 1577 aa28.42■■■□□ 2.14
CLDN7-203ENST00000538261 TOPBP1Q92547 1522 aa28.36■■■□□ 2.13
CLDN7-203ENST00000538261 FGD5Q6ZNL6 1462 aa28.34■■■□□ 2.13
CLDN7-203ENST00000538261 URB2Q14146 1524 aaKnown RBP28.34■■■□□ 2.13
CLDN7-203ENST00000538261 CSRNP3Q8WYN3 585 aa28.24■■■□□ 2.11
CLDN7-203ENST00000538261 POLA1P09884 1462 aaPredicted RBP28.23■■■□□ 2.11
CLDN7-203ENST00000538261 MRC2Q9UBG0 1479 aa28.17■■■□□ 2.1
CLDN7-203ENST00000538261 KIF27Q86VH2 1401 aa28.16■■■□□ 2.1
CLDN7-203ENST00000538261 KIF21BO75037 1637 aa28.14■■■□□ 2.1
CLDN7-203ENST00000538261 CUX2O14529 1486 aa28.12■■■□□ 2.09
CLDN7-203ENST00000538261 EHMT2Q96KQ7 1210 aa28.11■■■□□ 2.09
CLDN7-203ENST00000538261 RAD54L2Q9Y4B4 1467 aa28.11■■■□□ 2.09
CLDN7-203ENST00000538261 ABCA10Q8WWZ4 1543 aa28.09■■■□□ 2.09
CLDN7-203ENST00000538261 WDR97A6NE52 1622 aa28.08■■■□□ 2.09
CLDN7-203ENST00000538261 WDR62O43379 1518 aa28.06■■■□□ 2.08
CLDN7-203ENST00000538261 GOLGA3Q08378 1498 aa28.06■■■□□ 2.08
CLDN7-203ENST00000538261 ERCC6Q03468 1493 aa28.05■■■□□ 2.08
CLDN7-203ENST00000538261 THOC2Q8NI27 1593 aaKnown RBP28.02■■■□□ 2.08
CLDN7-203ENST00000538261 PRXQ9BXM0 1461 aa28.01■■■□□ 2.07
CLDN7-203ENST00000538261 TARBP1Q13395 1621 aaKnown RBP27.97■■■□□ 2.07
CLDN7-203ENST00000538261 RAPGEF2Q9Y4G8 1499 aa27.97■■■□□ 2.07
CLDN7-203ENST00000538261 ERICH3Q5RHP9 1530 aa27.95■■■□□ 2.07
CLDN7-203ENST00000538261 TNIKQ9UKE5 1360 aa27.94■■■□□ 2.06
CLDN7-203ENST00000538261 IGF1RP08069 1367 aa27.92■■■□□ 2.06
CLDN7-203ENST00000538261 ABCA5Q8WWZ7 1642 aa27.92■■■□□ 2.06
CLDN7-203ENST00000538261 HRCP23327 699 aa27.86■■■□□ 2.05
CLDN7-203ENST00000538261 UBTFP17480 764 aaKnown RBP27.82■■■□□ 2.04
CLDN7-203ENST00000538261 CEP162Q5TB80 1403 aa27.81■■■□□ 2.04
CLDN7-203ENST00000538261 TDRD9Q8NDG6 1382 aaKnown RBP27.8■■■□□ 2.04
CLDN7-203ENST00000538261 IFT140Q96RY7 1462 aa27.8■■■□□ 2.04
CLDN7-203ENST00000538261 GAPVD1Q14C86 1478 aa27.78■■■□□ 2.04
CLDN7-203ENST00000538261 CUL7Q14999 1698 aa27.77■■■□□ 2.04
CLDN7-203ENST00000538261 CARMIL1Q5VZK9 1371 aa27.76■■■□□ 2.03
CLDN7-203ENST00000538261 PBRM1Q86U86 1689 aa27.7■■■□□ 2.02
CLDN7-203ENST00000538261 ZNF608Q9ULD9 1512 aaPredicted RBP27.68■■■□□ 2.02
CLDN7-203ENST00000538261 AQRO60306 1485 aaKnown RBP eCLIP27.65■■■□□ 2.02
CLDN7-203ENST00000538261 EIF4G3O43432 1585 aaKnown RBP27.61■■■□□ 2.01
CLDN7-203ENST00000538261 CLIP1P30622 1438 aa27.59■■■□□ 2.01
CLDN7-203ENST00000538261 GRIN2BQ13224 1484 aa27.58■■■□□ 2.01
CLDN7-203ENST00000538261 ADAMTS12P58397 1594 aa27.55■■■□□ 2
CLDN7-203ENST00000538261 FHAD1B1AJZ9 1412 aa27.49■■□□□ 1.99
CLDN7-203ENST00000538261 CTTNBP2Q8WZ74 1663 aa27.47■■□□□ 1.99
CLDN7-203ENST00000538261 SNAPC4Q5SXM2 1469 aa27.42■■□□□ 1.98
CLDN7-203ENST00000538261 ARAP1Q96P48 1450 aa27.39■■□□□ 1.98
CLDN7-203ENST00000538261 RANGAP1P46060 587 aaPredicted RBP27.39■■□□□ 1.97
CLDN7-203ENST00000538261 ARHGAP35Q9NRY4 1499 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms