RNA–Protein interactions for RNA: ENST00000621723.4

NBL1-212, Transcript of NBL1, DAN family BMP antagonist, humanhuman

APPRIS P3 TSL 2 BASIC

Gene NBL1, Length 2,133 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBL1-212ENST00000621723 NISCHQ9Y2I1 1504 aa39.34■■■■□ 3.89
NBL1-212ENST00000621723 CCDC180Q9P1Z9 1646 aa34.26■■■■□ 3.08
NBL1-212ENST00000621723 ZCCHC6Q5VYS8 1495 aaKnown RBP33.18■■■□□ 2.9
NBL1-212ENST00000621723 SHROOM4Q9ULL8 1493 aa33.15■■■□□ 2.9
NBL1-212ENST00000621723 ABCC9O60706 1549 aa32.98■■■□□ 2.87
NBL1-212ENST00000621723 DCAF1Q9Y4B6 1507 aa32.59■■■□□ 2.81
NBL1-212ENST00000621723 SUPT5HO00267 1087 aaKnown RBP32.48■■■□□ 2.79
NBL1-212ENST00000621723 DCAF8L2P0C7V8 631 aa32.43■■■□□ 2.78
NBL1-212ENST00000621723 MYO15BQ96JP2 1530 aa32.03■■■□□ 2.72
NBL1-212ENST00000621723 NACADO15069 1562 aa32.03■■■□□ 2.72
NBL1-212ENST00000621723 RB1CC1Q8TDY2 1594 aa31.9■■■□□ 2.7
NBL1-212ENST00000621723 CHIC1Q5VXU3 224 aa31.72■■■□□ 2.67
NBL1-212ENST00000621723 SCRIBQ14160 1630 aa31.5■■■□□ 2.63
NBL1-212ENST00000621723 UNC13AQ9UPW8 1703 aa31.36■■■□□ 2.61
NBL1-212ENST00000621723 BICRAQ9NZM4 1560 aa31.05■■■□□ 2.56
NBL1-212ENST00000621723 PABPN1Q86U42 306 aaKnown RBP eCLIP31.01■■■□□ 2.55
NBL1-212ENST00000621723 RSF1Q96T23 1441 aaPredicted RBP30.91■■■□□ 2.54
NBL1-212ENST00000621723 HRCP23327 699 aa30.79■■■□□ 2.52
NBL1-212ENST00000621723 LOC105371045A0A1W2PR82 267 aa30.71■■■□□ 2.51
NBL1-212ENST00000621723 PCGF6Q9BYE7 350 aa30.68■■■□□ 2.5
NBL1-212ENST00000621723 CECR2Q9BXF3 1484 aa30.47■■■□□ 2.47
NBL1-212ENST00000621723 MROH2BQ7Z745 1585 aa30.39■■■□□ 2.46
NBL1-212ENST00000621723 BAZ1AQ9NRL2 1556 aaPredicted RBP30.36■■■□□ 2.45
NBL1-212ENST00000621723 TRIM41Q8WV44 630 aa30.29■■■□□ 2.44
NBL1-212ENST00000621723 WIZO95785 1651 aa30.26■■■□□ 2.43
NBL1-212ENST00000621723 TRIM26Q12899 539 aaPredicted RBP30.15■■■□□ 2.42
NBL1-212ENST00000621723 SMARCA4P51532 1647 aa30.14■■■□□ 2.42
NBL1-212ENST00000621723 EIF4G1Q04637 1599 aaKnown RBP30.12■■■□□ 2.41
NBL1-212ENST00000621723 PPARGC1BQ86YN6 1023 aaKnown RBP30.1■■■□□ 2.41
NBL1-212ENST00000621723 FAM9AQ8IZU1 332 aaPredicted RBP29.99■■■□□ 2.39
NBL1-212ENST00000621723 TOP2AP11388 1531 aaKnown RBP29.92■■■□□ 2.38
NBL1-212ENST00000621723 CC2D2AQ9P2K1 1620 aa29.83■■■□□ 2.37
NBL1-212ENST00000621723 ATAD2BQ9ULI0 1458 aa29.78■■■□□ 2.36
NBL1-212ENST00000621723 PEG3Q9GZU2 1588 aa29.77■■■□□ 2.36
NBL1-212ENST00000621723 SMARCA2P51531 1590 aa29.7■■■□□ 2.34
NBL1-212ENST00000621723 DNAJC5BQ9UF47 199 aa29.68■■■□□ 2.34
NBL1-212ENST00000621723 EHMT2Q96KQ7 1210 aa29.67■■■□□ 2.34
NBL1-212ENST00000621723 CCDC88BA6NC98 1476 aa29.6■■■□□ 2.33
NBL1-212ENST00000621723 NCAPD3P42695 1498 aa29.59■■■□□ 2.33
NBL1-212ENST00000621723 BAZ1BQ9UIG0 1483 aaKnown RBP29.55■■■□□ 2.32
NBL1-212ENST00000621723 ABCC8Q09428 1581 aa29.55■■■□□ 2.32
NBL1-212ENST00000621723 HMGXB3Q12766 1538 aa29.49■■■□□ 2.31
NBL1-212ENST00000621723 ZEB1P37275 1124 aaPredicted RBP29.49■■■□□ 2.31
NBL1-212ENST00000621723 SOGA1O94964 1423 aa29.23■■■□□ 2.27
NBL1-212ENST00000621723 WRNQ14191 1432 aaPredicted RBP eCLIP29.17■■■□□ 2.26
NBL1-212ENST00000621723 EEA1Q15075 1411 aa29.13■■■□□ 2.25
NBL1-212ENST00000621723 CEP162Q5TB80 1403 aa29.12■■■□□ 2.25
NBL1-212ENST00000621723 RUSC2Q8N2Y8 1516 aa29.11■■■□□ 2.25
NBL1-212ENST00000621723 TNIKQ9UKE5 1360 aa29.08■■■□□ 2.25
NBL1-212ENST00000621723 CSRNP3Q8WYN3 585 aa29■■■□□ 2.23
NBL1-212ENST00000621723 SYNJ1O43426 1573 aa28.96■■■□□ 2.23
NBL1-212ENST00000621723 GOLGA3Q08378 1498 aa28.92■■■□□ 2.22
NBL1-212ENST00000621723 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.9■■■□□ 2.22
NBL1-212ENST00000621723 KIF21BO75037 1637 aa28.82■■■□□ 2.2
NBL1-212ENST00000621723 NESP48681 1621 aa28.82■■■□□ 2.2
NBL1-212ENST00000621723 UBTFP17480 764 aaKnown RBP28.82■■■□□ 2.2
NBL1-212ENST00000621723 CFTRP13569 1480 aa28.8■■■□□ 2.2
NBL1-212ENST00000621723 CCER1Q8TC90 406 aaPredicted RBP28.79■■■□□ 2.2
NBL1-212ENST00000621723 CADPSQ9ULU8 1353 aa28.79■■■□□ 2.2
NBL1-212ENST00000621723 CEP164Q9UPV0 1460 aa28.76■■■□□ 2.19
NBL1-212ENST00000621723 TTBK1Q5TCY1 1321 aaPredicted RBP28.75■■■□□ 2.19
NBL1-212ENST00000621723 LAMC3Q9Y6N6 1575 aa28.67■■■□□ 2.18
NBL1-212ENST00000621723 TOP2BQ02880 1626 aa28.65■■■□□ 2.18
NBL1-212ENST00000621723 BIVM-ERCC5R4GMW8 1640 aa28.62■■■□□ 2.17
NBL1-212ENST00000621723 PRDM2Q13029 1718 aa28.61■■■□□ 2.17
NBL1-212ENST00000621723 CLIP1P30622 1438 aa28.56■■■□□ 2.16
NBL1-212ENST00000621723 RAPGEF2Q9Y4G8 1499 aa28.54■■■□□ 2.16
NBL1-212ENST00000621723 FANCD2Q9BXW9 1451 aa28.49■■■□□ 2.15
NBL1-212ENST00000621723 VPS8Q8N3P4 1428 aa28.47■■■□□ 2.15
NBL1-212ENST00000621723 KIF21AQ7Z4S6 1674 aa28.45■■■□□ 2.14
NBL1-212ENST00000621723 PDS5BQ9NTI5 1447 aa28.44■■■□□ 2.14
NBL1-212ENST00000621723 CUX1P39880 1505 aa28.39■■■□□ 2.14
NBL1-212ENST00000621723 SCAF1Q9H7N4 1312 aaKnown RBP28.37■■■□□ 2.13
NBL1-212ENST00000621723 ERICH3Q5RHP9 1530 aa28.33■■■□□ 2.13
NBL1-212ENST00000621723 PRXQ9BXM0 1461 aa28.3■■■□□ 2.12
NBL1-212ENST00000621723 DIEXFQ68CQ4 756 aaKnown RBP28.28■■■□□ 2.12
NBL1-212ENST00000621723 ERCC6Q03468 1493 aa28.27■■■□□ 2.12
NBL1-212ENST00000621723 URB2Q14146 1524 aaKnown RBP28.21■■■□□ 2.11
NBL1-212ENST00000621723 HNRNPUL2Q1KMD3 747 aaKnown RBP28.2■■■□□ 2.1
NBL1-212ENST00000621723 ARAP1Q96P48 1450 aa28.17■■■□□ 2.1
NBL1-212ENST00000621723 KIF27Q86VH2 1401 aa28.17■■■□□ 2.1
NBL1-212ENST00000621723 RANGAP1P46060 587 aaPredicted RBP28.16■■■□□ 2.1
NBL1-212ENST00000621723 APLP2Q06481 763 aa28.15■■■□□ 2.1
NBL1-212ENST00000621723 MRC2Q9UBG0 1479 aa28.14■■■□□ 2.09
NBL1-212ENST00000621723 TOPBP1Q92547 1522 aa28.13■■■□□ 2.09
NBL1-212ENST00000621723 DNMBPQ6XZF7 1577 aa28.12■■■□□ 2.09
NBL1-212ENST00000621723 THOC2Q8NI27 1593 aaKnown RBP28.11■■■□□ 2.09
NBL1-212ENST00000621723 ACIN1Q9UKV3 1341 aaKnown RBP28.09■■■□□ 2.09
NBL1-212ENST00000621723 ZNF316A6NFI3 1004 aaPredicted RBP28.09■■■□□ 2.09
NBL1-212ENST00000621723 NEUROD1Q13562 356 aa28.05■■■□□ 2.08
NBL1-212ENST00000621723 WDR62O43379 1518 aa28.03■■■□□ 2.08
NBL1-212ENST00000621723 FGD5Q6ZNL6 1462 aa28.01■■■□□ 2.07
NBL1-212ENST00000621723 POLA1P09884 1462 aaPredicted RBP27.97■■■□□ 2.07
NBL1-212ENST00000621723 CUX2O14529 1486 aa27.92■■■□□ 2.06
NBL1-212ENST00000621723 ARHGAP35Q9NRY4 1499 aa27.91■■■□□ 2.06
NBL1-212ENST00000621723 KANK4Q5T7N3 995 aaPredicted RBP27.91■■■□□ 2.06
NBL1-212ENST00000621723 RAD54L2Q9Y4B4 1467 aa27.89■■■□□ 2.06
NBL1-212ENST00000621723 CENPBP07199 599 aaPredicted RBP27.88■■■□□ 2.05
NBL1-212ENST00000621723 RRBP1Q9P2E9 1410 aaKnown RBP27.84■■■□□ 2.05
NBL1-212ENST00000621723 IGF1RP08069 1367 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms