RNA–Protein interactions for RNA: ENST00000436976.1

HMGN1P19-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 19, humanhuman

BASIC

Gene HMGN1P19, Length 333 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P19-201ENST00000436976 NISCHQ9Y2I1 1504 aa42.56■■■■■ 4.4
HMGN1P19-201ENST00000436976 ABCC9O60706 1549 aa39.51■■■■□ 3.92
HMGN1P19-201ENST00000436976 CCDC180Q9P1Z9 1646 aa38.67■■■■□ 3.78
HMGN1P19-201ENST00000436976 DNAJC5BQ9UF47 199 aa37.94■■■■□ 3.66
HMGN1P19-201ENST00000436976 RB1CC1Q8TDY2 1594 aa37.18■■■■□ 3.54
HMGN1P19-201ENST00000436976 NACADO15069 1562 aa36.7■■■■□ 3.46
HMGN1P19-201ENST00000436976 UNC13AQ9UPW8 1703 aa36.59■■■■□ 3.45
HMGN1P19-201ENST00000436976 PABPN1Q86U42 306 aaKnown RBP eCLIP36.59■■■■□ 3.45
HMGN1P19-201ENST00000436976 BICRAQ9NZM4 1560 aa36.25■■■■□ 3.39
HMGN1P19-201ENST00000436976 DCAF8L2P0C7V8 631 aa36.19■■■■□ 3.38
HMGN1P19-201ENST00000436976 MYO15BQ96JP2 1530 aa35.87■■■■□ 3.33
HMGN1P19-201ENST00000436976 CC2D2AQ9P2K1 1620 aa35.71■■■■□ 3.31
HMGN1P19-201ENST00000436976 CECR2Q9BXF3 1484 aa35.67■■■■□ 3.3
HMGN1P19-201ENST00000436976 SHROOM4Q9ULL8 1493 aa35.51■■■■□ 3.28
HMGN1P19-201ENST00000436976 DNAJC5Q9H3Z4 198 aa35.42■■■■□ 3.26
HMGN1P19-201ENST00000436976 EIF4G1Q04637 1599 aaKnown RBP35.38■■■■□ 3.25
HMGN1P19-201ENST00000436976 SCRIBQ14160 1630 aa35.16■■■■□ 3.22
HMGN1P19-201ENST00000436976 ZCCHC6Q5VYS8 1495 aaKnown RBP35.09■■■■□ 3.21
HMGN1P19-201ENST00000436976 DCAF1Q9Y4B6 1507 aa35.08■■■■□ 3.21
HMGN1P19-201ENST00000436976 CUX2O14529 1486 aa34.4■■■■□ 3.1
HMGN1P19-201ENST00000436976 ERCC6Q03468 1493 aa34.11■■■■□ 3.05
HMGN1P19-201ENST00000436976 NCAPD3P42695 1498 aa33.88■■■■□ 3.01
HMGN1P19-201ENST00000436976 NESP48681 1621 aa33.72■■■□□ 2.99
HMGN1P19-201ENST00000436976 ATAD2BQ9ULI0 1458 aa33.67■■■□□ 2.98
HMGN1P19-201ENST00000436976 THOC2Q8NI27 1593 aaKnown RBP33.62■■■□□ 2.97
HMGN1P19-201ENST00000436976 HMGXB3Q12766 1538 aa33.58■■■□□ 2.97
HMGN1P19-201ENST00000436976 SMARCA2P51531 1590 aa33.49■■■□□ 2.95
HMGN1P19-201ENST00000436976 TRIM41Q8WV44 630 aa33.46■■■□□ 2.95
HMGN1P19-201ENST00000436976 SMARCA4P51532 1647 aa33.46■■■□□ 2.95
HMGN1P19-201ENST00000436976 KIF21AQ7Z4S6 1674 aa33.35■■■□□ 2.93
HMGN1P19-201ENST00000436976 LAMC3Q9Y6N6 1575 aa33.3■■■□□ 2.92
HMGN1P19-201ENST00000436976 BAZ1BQ9UIG0 1483 aaKnown RBP33.25■■■□□ 2.91
HMGN1P19-201ENST00000436976 PEG3Q9GZU2 1588 aa33.13■■■□□ 2.89
HMGN1P19-201ENST00000436976 BAZ1AQ9NRL2 1556 aaPredicted RBP33.08■■■□□ 2.89
HMGN1P19-201ENST00000436976 PDS5BQ9NTI5 1447 aa33.03■■■□□ 2.88
HMGN1P19-201ENST00000436976 WDR62O43379 1518 aa32.87■■■□□ 2.85
HMGN1P19-201ENST00000436976 MRC2Q9UBG0 1479 aa32.87■■■□□ 2.85
HMGN1P19-201ENST00000436976 MROH2BQ7Z745 1585 aa32.82■■■□□ 2.84
HMGN1P19-201ENST00000436976 CADPSQ9ULU8 1353 aa32.76■■■□□ 2.83
HMGN1P19-201ENST00000436976 OSCARQ8IYS5 282 aa32.59■■■□□ 2.81
HMGN1P19-201ENST00000436976 CEP164Q9UPV0 1460 aa32.54■■■□□ 2.8
HMGN1P19-201ENST00000436976 RIMBP3CA6NJZ7 1639 aa32.46■■■□□ 2.79
HMGN1P19-201ENST00000436976 RIMBP3BA6NNM3 1639 aa32.46■■■□□ 2.79
HMGN1P19-201ENST00000436976 RIMBP3Q9UFD9 1639 aa32.46■■■□□ 2.79
HMGN1P19-201ENST00000436976 WIZO95785 1651 aa32.43■■■□□ 2.78
HMGN1P19-201ENST00000436976 FANCD2Q9BXW9 1451 aa32.43■■■□□ 2.78
HMGN1P19-201ENST00000436976 URB2Q14146 1524 aaKnown RBP32.29■■■□□ 2.76
HMGN1P19-201ENST00000436976 CFTRP13569 1480 aa32.24■■■□□ 2.75
HMGN1P19-201ENST00000436976 ARHGEF11O15085 1522 aa32.21■■■□□ 2.75
HMGN1P19-201ENST00000436976 ZNF608Q9ULD9 1512 aaPredicted RBP32.05■■■□□ 2.72
HMGN1P19-201ENST00000436976 PRDM2Q13029 1718 aa32.03■■■□□ 2.72
HMGN1P19-201ENST00000436976 CYB5RLQ6IPT4 315 aa31.93■■■□□ 2.7
HMGN1P19-201ENST00000436976 IFT140Q96RY7 1462 aa31.91■■■□□ 2.7
HMGN1P19-201ENST00000436976 TOP2AP11388 1531 aaKnown RBP31.88■■■□□ 2.69
HMGN1P19-201ENST00000436976 CHD1O14646 1710 aa31.86■■■□□ 2.69
HMGN1P19-201ENST00000436976 EIF4G3O43432 1585 aaKnown RBP31.85■■■□□ 2.69
HMGN1P19-201ENST00000436976 ARAP1Q96P48 1450 aa31.84■■■□□ 2.69
HMGN1P19-201ENST00000436976 TRHP20396 242 aaPredicted RBP31.82■■■□□ 2.68
HMGN1P19-201ENST00000436976 TOPBP1Q92547 1522 aa31.75■■■□□ 2.67
HMGN1P19-201ENST00000436976 RSF1Q96T23 1441 aaPredicted RBP31.75■■■□□ 2.67
HMGN1P19-201ENST00000436976 TARBP1Q13395 1621 aaKnown RBP31.6■■■□□ 2.65
HMGN1P19-201ENST00000436976 AQRO60306 1485 aaKnown RBP eCLIP31.59■■■□□ 2.65
HMGN1P19-201ENST00000436976 DNMBPQ6XZF7 1577 aa31.56■■■□□ 2.64
HMGN1P19-201ENST00000436976 AEBP2Q6ZN18 517 aaPredicted RBP31.55■■■□□ 2.64
HMGN1P19-201ENST00000436976 ABCC8Q09428 1581 aa31.52■■■□□ 2.64
HMGN1P19-201ENST00000436976 CCDC88BA6NC98 1476 aa31.52■■■□□ 2.64
HMGN1P19-201ENST00000436976 FBLN2P98095 1184 aa31.46■■■□□ 2.63
HMGN1P19-201ENST00000436976 CLASP1Q7Z460 1538 aa31.39■■■□□ 2.61
HMGN1P19-201ENST00000436976 POLA1P09884 1462 aaPredicted RBP31.37■■■□□ 2.61
HMGN1P19-201ENST00000436976 RAD54L2Q9Y4B4 1467 aa31.27■■■□□ 2.6
HMGN1P19-201ENST00000436976 SNAPC4Q5SXM2 1469 aa31.24■■■□□ 2.59
HMGN1P19-201ENST00000436976 SYNJ1O43426 1573 aa31.22■■■□□ 2.59
HMGN1P19-201ENST00000436976 TDRD9Q8NDG6 1382 aaKnown RBP31.21■■■□□ 2.59
HMGN1P19-201ENST00000436976 SOGA1O94964 1423 aa31.14■■■□□ 2.58
HMGN1P19-201ENST00000436976 WDR97A6NE52 1622 aa31.13■■■□□ 2.57
HMGN1P19-201ENST00000436976 MAGI1Q96QZ7 1491 aaPredicted RBP31.09■■■□□ 2.57
HMGN1P19-201ENST00000436976 CHMP7Q8WUX9 453 aaPredicted RBP31.07■■■□□ 2.56
HMGN1P19-201ENST00000436976 GAPVD1Q14C86 1478 aa31.05■■■□□ 2.56
HMGN1P19-201ENST00000436976 FGD5Q6ZNL6 1462 aa31.03■■■□□ 2.56
HMGN1P19-201ENST00000436976 SYNJ2O15056 1496 aa31.01■■■□□ 2.55
HMGN1P19-201ENST00000436976 GRIN2BQ13224 1484 aa30.98■■■□□ 2.55
HMGN1P19-201ENST00000436976 PBRM1Q86U86 1689 aa30.97■■■□□ 2.55
HMGN1P19-201ENST00000436976 CUX1P39880 1505 aa30.89■■■□□ 2.54
HMGN1P19-201ENST00000436976 ERCC6L2Q5T890 1561 aa30.88■■■□□ 2.53
HMGN1P19-201ENST00000436976 KIF13AQ9H1H9 1805 aa30.82■■■□□ 2.52
HMGN1P19-201ENST00000436976 ABCA5Q8WWZ7 1642 aa30.73■■■□□ 2.51
HMGN1P19-201ENST00000436976 CEP170Q5SW79 1584 aa30.68■■■□□ 2.5
HMGN1P19-201ENST00000436976 GRIN2AQ12879 1464 aa30.63■■■□□ 2.49
HMGN1P19-201ENST00000436976 ABCA10Q8WWZ4 1543 aa30.61■■■□□ 2.49
HMGN1P19-201ENST00000436976 SHROOM2Q13796 1616 aa30.61■■■□□ 2.49
HMGN1P19-201ENST00000436976 NUP160Q12769 1436 aa30.56■■■□□ 2.48
HMGN1P19-201ENST00000436976 ADAMTS12P58397 1594 aa30.54■■■□□ 2.48
HMGN1P19-201ENST00000436976 ILDR1Q86SU0 546 aaPredicted RBP30.4■■■□□ 2.46
HMGN1P19-201ENST00000436976 KDM4FA0A1W2PPD8 638 aa30.37■■■□□ 2.45
HMGN1P19-201ENST00000436976 ABCC10Q5T3U5 1492 aa30.35■■■□□ 2.45
HMGN1P19-201ENST00000436976 DIP2BQ9P265 1576 aa30.32■■■□□ 2.45
HMGN1P19-201ENST00000436976 FHAD1B1AJZ9 1412 aa30.31■■■□□ 2.44
HMGN1P19-201ENST00000436976 PRG4Q92954 1404 aaPredicted RBP30.3■■■□□ 2.44
HMGN1P19-201ENST00000436976 FAM69CQ0P6D2 419 aa30.3■■■□□ 2.44
HMGN1P19-201ENST00000436976 KDM6BO15054 1643 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 265.2 ms