RNA–Protein interactions for RNA: ENST00000360066.6

CDK18-201, Transcript of cyclin dependent kinase 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK18, Length 3,141 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-201ENST00000360066 NISCHQ9Y2I1 1504 aa33.21■■■□□ 2.91
CDK18-201ENST00000360066 CCDC180Q9P1Z9 1646 aa28.46■■■□□ 2.15
CDK18-201ENST00000360066 ZCCHC6Q5VYS8 1495 aaKnown RBP28.08■■■□□ 2.09
CDK18-201ENST00000360066 SHROOM4Q9ULL8 1493 aa27.85■■■□□ 2.05
CDK18-201ENST00000360066 DCAF1Q9Y4B6 1507 aa27.4■■□□□ 1.98
CDK18-201ENST00000360066 DCAF8L2P0C7V8 631 aa27.25■■□□□ 1.95
CDK18-201ENST00000360066 SUPT5HO00267 1087 aaKnown RBP27.24■■□□□ 1.95
CDK18-201ENST00000360066 MYO15BQ96JP2 1530 aa26.72■■□□□ 1.87
CDK18-201ENST00000360066 CHIC1Q5VXU3 224 aa26.53■■□□□ 1.84
CDK18-201ENST00000360066 ABCC9O60706 1549 aa26.45■■□□□ 1.82
CDK18-201ENST00000360066 SCRIBQ14160 1630 aa26.41■■□□□ 1.82
CDK18-201ENST00000360066 NACADO15069 1562 aa26.31■■□□□ 1.8
CDK18-201ENST00000360066 HRCP23327 699 aa26.22■■□□□ 1.79
CDK18-201ENST00000360066 RSF1Q96T23 1441 aaPredicted RBP26.16■■□□□ 1.78
CDK18-201ENST00000360066 PCGF6Q9BYE7 350 aa26.11■■□□□ 1.77
CDK18-201ENST00000360066 RB1CC1Q8TDY2 1594 aa25.89■■□□□ 1.74
CDK18-201ENST00000360066 PPARGC1BQ86YN6 1023 aaKnown RBP25.86■■□□□ 1.73
CDK18-201ENST00000360066 LOC105371045A0A1W2PR82 267 aa25.83■■□□□ 1.72
CDK18-201ENST00000360066 CECR2Q9BXF3 1484 aa25.81■■□□□ 1.72
CDK18-201ENST00000360066 MROH2BQ7Z745 1585 aa25.75■■□□□ 1.71
CDK18-201ENST00000360066 WIZO95785 1651 aa25.59■■□□□ 1.69
CDK18-201ENST00000360066 BAZ1AQ9NRL2 1556 aaPredicted RBP25.54■■□□□ 1.68
CDK18-201ENST00000360066 TRIM41Q8WV44 630 aa25.5■■□□□ 1.67
CDK18-201ENST00000360066 UNC13AQ9UPW8 1703 aa25.48■■□□□ 1.67
CDK18-201ENST00000360066 TRIM26Q12899 539 aaPredicted RBP25.43■■□□□ 1.66
CDK18-201ENST00000360066 SMARCA4P51532 1647 aa25.34■■□□□ 1.65
CDK18-201ENST00000360066 TOP2AP11388 1531 aaKnown RBP25.27■■□□□ 1.64
CDK18-201ENST00000360066 EIF4G1Q04637 1599 aaKnown RBP25.27■■□□□ 1.64
CDK18-201ENST00000360066 BICRAQ9NZM4 1560 aa25.17■■□□□ 1.62
CDK18-201ENST00000360066 FAM9AQ8IZU1 332 aaPredicted RBP25.16■■□□□ 1.62
CDK18-201ENST00000360066 SMARCA2P51531 1590 aa25.1■■□□□ 1.61
CDK18-201ENST00000360066 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
CDK18-201ENST00000360066 EHMT2Q96KQ7 1210 aa25.03■■□□□ 1.6
CDK18-201ENST00000360066 PELP1Q8IZL8 1130 aaKnown RBP25■■□□□ 1.59
CDK18-201ENST00000360066 PABPN1Q86U42 306 aaKnown RBP eCLIP24.98■■□□□ 1.591e-6■■□□□ 13.6
CDK18-201ENST00000360066 ZEB1P37275 1124 aaPredicted RBP24.97■■□□□ 1.59
CDK18-201ENST00000360066 PEG3Q9GZU2 1588 aa24.96■■□□□ 1.59
CDK18-201ENST00000360066 ABCC8Q09428 1581 aa24.89■■□□□ 1.57
CDK18-201ENST00000360066 SCAF1Q9H7N4 1312 aaKnown RBP24.75■■□□□ 1.55
CDK18-201ENST00000360066 ATAD2BQ9ULI0 1458 aa24.71■■□□□ 1.55
CDK18-201ENST00000360066 EEA1Q15075 1411 aa24.63■■□□□ 1.53
CDK18-201ENST00000360066 SOGA1O94964 1423 aa24.61■■□□□ 1.53
CDK18-201ENST00000360066 BAZ1BQ9UIG0 1483 aaKnown RBP24.61■■□□□ 1.53
CDK18-201ENST00000360066 WRNQ14191 1432 aaPredicted RBP eCLIP24.56■■□□□ 1.52
CDK18-201ENST00000360066 TNIKQ9UKE5 1360 aa24.49■■□□□ 1.51
CDK18-201ENST00000360066 CSRNP3Q8WYN3 585 aa24.49■■□□□ 1.51
CDK18-201ENST00000360066 RUSC2Q8N2Y8 1516 aa24.49■■□□□ 1.51
CDK18-201ENST00000360066 SYNJ1O43426 1573 aa24.45■■□□□ 1.51
CDK18-201ENST00000360066 CEP162Q5TB80 1403 aa24.45■■□□□ 1.5
CDK18-201ENST00000360066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.45■■□□□ 1.5
CDK18-201ENST00000360066 CCER1Q8TC90 406 aaPredicted RBP24.39■■□□□ 1.5
CDK18-201ENST00000360066 GOLGA3Q08378 1498 aa24.37■■□□□ 1.49
CDK18-201ENST00000360066 HMGXB3Q12766 1538 aa24.33■■□□□ 1.49
CDK18-201ENST00000360066 NCAPD3P42695 1498 aa24.32■■□□□ 1.48
CDK18-201ENST00000360066 KIF21BO75037 1637 aa24.29■■□□□ 1.48
CDK18-201ENST00000360066 TTBK1Q5TCY1 1321 aaPredicted RBP24.29■■□□□ 1.48
CDK18-201ENST00000360066 UBTFP17480 764 aaKnown RBP24.28■■□□□ 1.48
CDK18-201ENST00000360066 CEP164Q9UPV0 1460 aa24.27■■□□□ 1.48
CDK18-201ENST00000360066 TOP2BQ02880 1626 aa24.24■■□□□ 1.47
CDK18-201ENST00000360066 BIVM-ERCC5R4GMW8 1640 aa24.19■■□□□ 1.46
CDK18-201ENST00000360066 GTF3C3Q9Y5Q9 886 aa24.07■■□□□ 1.44
CDK18-201ENST00000360066 NEUROD1Q13562 356 aa24.06■■□□□ 1.44
CDK18-201ENST00000360066 DIEXFQ68CQ4 756 aaKnown RBP24.06■■□□□ 1.44
CDK18-201ENST00000360066 RAPGEF2Q9Y4G8 1499 aa24.05■■□□□ 1.44
CDK18-201ENST00000360066 CFTRP13569 1480 aa24.05■■□□□ 1.44
CDK18-201ENST00000360066 ACIN1Q9UKV3 1341 aaKnown RBP24.04■■□□□ 1.44
CDK18-201ENST00000360066 CLIP1P30622 1438 aa24.04■■□□□ 1.44
CDK18-201ENST00000360066 CUX1P39880 1505 aa24■■□□□ 1.43
CDK18-201ENST00000360066 ERICH3Q5RHP9 1530 aa23.96■■□□□ 1.43
CDK18-201ENST00000360066 VPS8Q8N3P4 1428 aa23.95■■□□□ 1.42
CDK18-201ENST00000360066 MYT1Q01538 1121 aa23.95■■□□□ 1.42
CDK18-201ENST00000360066 PRXQ9BXM0 1461 aa23.94■■□□□ 1.42
CDK18-201ENST00000360066 PRDM2Q13029 1718 aa23.93■■□□□ 1.42
CDK18-201ENST00000360066 CENPBP07199 599 aaPredicted RBP23.86■■□□□ 1.41
CDK18-201ENST00000360066 KIF27Q86VH2 1401 aa23.85■■□□□ 1.41
CDK18-201ENST00000360066 YTHDC1Q96MU7 727 aaKnown RBP23.83■■□□□ 1.41
CDK18-201ENST00000360066 CADPSQ9ULU8 1353 aa23.78■■□□□ 1.4
CDK18-201ENST00000360066 ZNF316A6NFI3 1004 aaPredicted RBP23.76■■□□□ 1.39
CDK18-201ENST00000360066 CC2D2AQ9P2K1 1620 aa23.74■■□□□ 1.39
CDK18-201ENST00000360066 APLP2Q06481 763 aa23.73■■□□□ 1.39
CDK18-201ENST00000360066 HNRNPUL2Q1KMD3 747 aaKnown RBP23.73■■□□□ 1.39
CDK18-201ENST00000360066 ARAP1Q96P48 1450 aa23.7■■□□□ 1.39
CDK18-201ENST00000360066 RANGAP1P46060 587 aaPredicted RBP23.68■■□□□ 1.38
CDK18-201ENST00000360066 CUX2O14529 1486 aa23.6■■□□□ 1.37
CDK18-201ENST00000360066 IGF1RP08069 1367 aa23.59■■□□□ 1.37
CDK18-201ENST00000360066 FGD5Q6ZNL6 1462 aa23.58■■□□□ 1.37
CDK18-201ENST00000360066 ARHGAP35Q9NRY4 1499 aa23.54■■□□□ 1.36
CDK18-201ENST00000360066 FANCD2Q9BXW9 1451 aa23.53■■□□□ 1.36
CDK18-201ENST00000360066 MIER1Q8N108 512 aa23.51■■□□□ 1.35
CDK18-201ENST00000360066 CARMIL1Q5VZK9 1371 aa23.47■■□□□ 1.35
CDK18-201ENST00000360066 DNMBPQ6XZF7 1577 aa23.45■■□□□ 1.34
CDK18-201ENST00000360066 KANK4Q5T7N3 995 aaPredicted RBP23.45■■□□□ 1.34
CDK18-201ENST00000360066 RRBP1Q9P2E9 1410 aaKnown RBP23.4■■□□□ 1.34
CDK18-201ENST00000360066 TOPBP1Q92547 1522 aa23.38■■□□□ 1.33
CDK18-201ENST00000360066 ABCA10Q8WWZ4 1543 aa23.37■■□□□ 1.33
CDK18-201ENST00000360066 NESP48681 1621 aa23.35■■□□□ 1.33
CDK18-201ENST00000360066 POLA1P09884 1462 aaPredicted RBP23.34■■□□□ 1.33
CDK18-201ENST00000360066 MAP3K1Q13233 1512 aa23.34■■□□□ 1.33
CDK18-201ENST00000360066 LAMC3Q9Y6N6 1575 aa23.32■■□□□ 1.32
CDK18-201ENST00000360066 RAD54L2Q9Y4B4 1467 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms