RNA–Protein interactions for RNA: ENST00000615497.4

TBC1D1-219, Transcript of TBC1 domain family member 1, humanhuman

TSL 2 BASIC

Gene TBC1D1, Length 2,383 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-219ENST00000615497 NISCHQ9Y2I1 1504 aa34.24■■■■□ 3.07
TBC1D1-219ENST00000615497 CCDC180Q9P1Z9 1646 aa29.51■■■□□ 2.32
TBC1D1-219ENST00000615497 ZCCHC6Q5VYS8 1495 aaKnown RBP28.84■■■□□ 2.21
TBC1D1-219ENST00000615497 SHROOM4Q9ULL8 1493 aa28.37■■■□□ 2.13
TBC1D1-219ENST00000615497 DCAF8L2P0C7V8 631 aa28.25■■■□□ 2.11
TBC1D1-219ENST00000615497 DCAF1Q9Y4B6 1507 aa28.21■■■□□ 2.11
TBC1D1-219ENST00000615497 ABCC9O60706 1549 aa27.75■■■□□ 2.03
TBC1D1-219ENST00000615497 MYO15BQ96JP2 1530 aa27.7■■■□□ 2.03
TBC1D1-219ENST00000615497 SUPT5HO00267 1087 aaKnown RBP27.48■■□□□ 1.99
TBC1D1-219ENST00000615497 NACADO15069 1562 aa27.43■■□□□ 1.98
TBC1D1-219ENST00000615497 SCRIBQ14160 1630 aa27.36■■□□□ 1.97
TBC1D1-219ENST00000615497 RB1CC1Q8TDY2 1594 aa27.09■■□□□ 1.93
TBC1D1-219ENST00000615497 RSF1Q96T23 1441 aaPredicted RBP26.78■■□□□ 1.88
TBC1D1-219ENST00000615497 CECR2Q9BXF3 1484 aa26.69■■□□□ 1.86
TBC1D1-219ENST00000615497 UNC13AQ9UPW8 1703 aa26.67■■□□□ 1.86
TBC1D1-219ENST00000615497 MROH2BQ7Z745 1585 aa26.54■■□□□ 1.84
TBC1D1-219ENST00000615497 CHIC1Q5VXU3 224 aa26.52■■□□□ 1.84
TBC1D1-219ENST00000615497 BICRAQ9NZM4 1560 aa26.42■■□□□ 1.82
TBC1D1-219ENST00000615497 BAZ1AQ9NRL2 1556 aaPredicted RBP26.34■■□□□ 1.81
TBC1D1-219ENST00000615497 PABPN1Q86U42 306 aaKnown RBP eCLIP26.33■■□□□ 1.81
TBC1D1-219ENST00000615497 WIZO95785 1651 aa26.32■■□□□ 1.8
TBC1D1-219ENST00000615497 SMARCA4P51532 1647 aa26.21■■□□□ 1.79
TBC1D1-219ENST00000615497 TOP2AP11388 1531 aaKnown RBP25.97■■□□□ 1.75
TBC1D1-219ENST00000615497 PEG3Q9GZU2 1588 aa25.84■■□□□ 1.73
TBC1D1-219ENST00000615497 CCDC88BA6NC98 1476 aa25.8■■□□□ 1.72
TBC1D1-219ENST00000615497 SMARCA2P51531 1590 aa25.8■■□□□ 1.72
TBC1D1-219ENST00000615497 EIF4G1Q04637 1599 aaKnown RBP25.77■■□□□ 1.72
TBC1D1-219ENST00000615497 TRIM41Q8WV44 630 aa25.73■■□□□ 1.71
TBC1D1-219ENST00000615497 ATAD2BQ9ULI0 1458 aa25.71■■□□□ 1.71
TBC1D1-219ENST00000615497 LOC105371045A0A1W2PR82 267 aa25.61■■□□□ 1.69
TBC1D1-219ENST00000615497 BAZ1BQ9UIG0 1483 aaKnown RBP25.55■■□□□ 1.68
TBC1D1-219ENST00000615497 ABCC8Q09428 1581 aa25.43■■□□□ 1.66
TBC1D1-219ENST00000615497 NCAPD3P42695 1498 aa25.39■■□□□ 1.66
TBC1D1-219ENST00000615497 FAM9AQ8IZU1 332 aaPredicted RBP25.38■■□□□ 1.65
TBC1D1-219ENST00000615497 HMGXB3Q12766 1538 aa25.33■■□□□ 1.65
TBC1D1-219ENST00000615497 WRNQ14191 1432 aaPredicted RBP eCLIP25.14■■□□□ 1.61
TBC1D1-219ENST00000615497 CC2D2AQ9P2K1 1620 aa25.07■■□□□ 1.6
TBC1D1-219ENST00000615497 EHMT2Q96KQ7 1210 aa25.07■■□□□ 1.6
TBC1D1-219ENST00000615497 SOGA1O94964 1423 aa25.06■■□□□ 1.6
TBC1D1-219ENST00000615497 SYNJ1O43426 1573 aa25.06■■□□□ 1.6
TBC1D1-219ENST00000615497 RUSC2Q8N2Y8 1516 aa24.99■■□□□ 1.59
TBC1D1-219ENST00000615497 CFTRP13569 1480 aa24.96■■□□□ 1.59
TBC1D1-219ENST00000615497 EEA1Q15075 1411 aa24.89■■□□□ 1.58
TBC1D1-219ENST00000615497 TOP2BQ02880 1626 aa24.86■■□□□ 1.57
TBC1D1-219ENST00000615497 CSRNP3Q8WYN3 585 aa24.85■■□□□ 1.57
TBC1D1-219ENST00000615497 PCGF6Q9BYE7 350 aa24.81■■□□□ 1.56
TBC1D1-219ENST00000615497 BIVM-ERCC5R4GMW8 1640 aa24.8■■□□□ 1.56
TBC1D1-219ENST00000615497 CADPSQ9ULU8 1353 aa24.79■■□□□ 1.56
TBC1D1-219ENST00000615497 CUX1P39880 1505 aa24.76■■□□□ 1.55
TBC1D1-219ENST00000615497 PRDM2Q13029 1718 aa24.72■■□□□ 1.55
TBC1D1-219ENST00000615497 TNIKQ9UKE5 1360 aa24.67■■□□□ 1.54
TBC1D1-219ENST00000615497 GOLGA3Q08378 1498 aa24.63■■□□□ 1.53
TBC1D1-219ENST00000615497 TRIM26Q12899 539 aaPredicted RBP24.6■■□□□ 1.53
TBC1D1-219ENST00000615497 CEP162Q5TB80 1403 aa24.6■■□□□ 1.53
TBC1D1-219ENST00000615497 KIF21BO75037 1637 aa24.59■■□□□ 1.53
TBC1D1-219ENST00000615497 DNAJC5BQ9UF47 199 aa24.59■■□□□ 1.53
TBC1D1-219ENST00000615497 CEP164Q9UPV0 1460 aa24.58■■□□□ 1.53
TBC1D1-219ENST00000615497 UBTFP17480 764 aaKnown RBP24.57■■□□□ 1.52
TBC1D1-219ENST00000615497 NESP48681 1621 aa24.54■■□□□ 1.52
TBC1D1-219ENST00000615497 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
TBC1D1-219ENST00000615497 RAPGEF2Q9Y4G8 1499 aa24.5■■□□□ 1.51
TBC1D1-219ENST00000615497 PRXQ9BXM0 1461 aa24.43■■□□□ 1.5
TBC1D1-219ENST00000615497 KIF27Q86VH2 1401 aa24.42■■□□□ 1.5
TBC1D1-219ENST00000615497 FGD5Q6ZNL6 1462 aa24.4■■□□□ 1.5
TBC1D1-219ENST00000615497 LAMC3Q9Y6N6 1575 aa24.39■■□□□ 1.49
TBC1D1-219ENST00000615497 PPARGC1BQ86YN6 1023 aaKnown RBP24.39■■□□□ 1.49
TBC1D1-219ENST00000615497 HRCP23327 699 aa24.38■■□□□ 1.49
TBC1D1-219ENST00000615497 ERICH3Q5RHP9 1530 aa24.34■■□□□ 1.49
TBC1D1-219ENST00000615497 CUX2O14529 1486 aa24.32■■□□□ 1.48
TBC1D1-219ENST00000615497 DNMBPQ6XZF7 1577 aa24.32■■□□□ 1.48
TBC1D1-219ENST00000615497 TOPBP1Q92547 1522 aa24.3■■□□□ 1.48
TBC1D1-219ENST00000615497 CLIP1P30622 1438 aa24.3■■□□□ 1.48
TBC1D1-219ENST00000615497 IGF1RP08069 1367 aa24.27■■□□□ 1.48
TBC1D1-219ENST00000615497 POLA1P09884 1462 aaPredicted RBP24.24■■□□□ 1.47
TBC1D1-219ENST00000615497 URB2Q14146 1524 aaKnown RBP24.23■■□□□ 1.47
TBC1D1-219ENST00000615497 RAD54L2Q9Y4B4 1467 aa24.21■■□□□ 1.47
TBC1D1-219ENST00000615497 PDS5BQ9NTI5 1447 aa24.21■■□□□ 1.47
TBC1D1-219ENST00000615497 ABCA10Q8WWZ4 1543 aa24.16■■□□□ 1.46
TBC1D1-219ENST00000615497 RANGAP1P46060 587 aaPredicted RBP24.15■■□□□ 1.46
TBC1D1-219ENST00000615497 KIF21AQ7Z4S6 1674 aa24.14■■□□□ 1.45
TBC1D1-219ENST00000615497 VPS8Q8N3P4 1428 aa24.13■■□□□ 1.45
TBC1D1-219ENST00000615497 CARMIL1Q5VZK9 1371 aa24.11■■□□□ 1.45
TBC1D1-219ENST00000615497 TTBK1Q5TCY1 1321 aaPredicted RBP24.07■■□□□ 1.44
TBC1D1-219ENST00000615497 ARAP1Q96P48 1450 aa24.04■■□□□ 1.44
TBC1D1-219ENST00000615497 WDR97A6NE52 1622 aa24.02■■□□□ 1.44
TBC1D1-219ENST00000615497 ARHGAP35Q9NRY4 1499 aa23.96■■□□□ 1.43
TBC1D1-219ENST00000615497 TDRD9Q8NDG6 1382 aaKnown RBP23.95■■□□□ 1.42
TBC1D1-219ENST00000615497 ABCA5Q8WWZ7 1642 aa23.93■■□□□ 1.42
TBC1D1-219ENST00000615497 TARBP1Q13395 1621 aaKnown RBP23.91■■□□□ 1.42
TBC1D1-219ENST00000615497 MRC2Q9UBG0 1479 aa23.89■■□□□ 1.41
TBC1D1-219ENST00000615497 CUL7Q14999 1698 aa23.88■■□□□ 1.41
TBC1D1-219ENST00000615497 GAPVD1Q14C86 1478 aa23.87■■□□□ 1.41
TBC1D1-219ENST00000615497 APLP2Q06481 763 aa23.82■■□□□ 1.4
TBC1D1-219ENST00000615497 WDR62O43379 1518 aa23.76■■□□□ 1.39
TBC1D1-219ENST00000615497 KANK4Q5T7N3 995 aaPredicted RBP23.75■■□□□ 1.39
TBC1D1-219ENST00000615497 AQRO60306 1485 aaKnown RBP eCLIP23.72■■□□□ 1.39
TBC1D1-219ENST00000615497 ZEB1P37275 1124 aaPredicted RBP23.71■■□□□ 1.39
TBC1D1-219ENST00000615497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.7■■□□□ 1.38
TBC1D1-219ENST00000615497 CTTNBP2Q8WZ74 1663 aa23.7■■□□□ 1.38
TBC1D1-219ENST00000615497 P3H3Q8IVL6 736 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms