RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 NISCHQ9Y2I1 1504 aa28.55■■■□□ 2.16
SCAP-206ENST00000428413 DCAF8L2P0C7V8 631 aa26.88■■□□□ 1.89
SCAP-206ENST00000428413 SHROOM4Q9ULL8 1493 aa26.71■■□□□ 1.87
SCAP-206ENST00000428413 SUPT5HO00267 1087 aaKnown RBP26.51■■□□□ 1.83
SCAP-206ENST00000428413 EHMT2Q96KQ7 1210 aa25.41■■□□□ 1.66
SCAP-206ENST00000428413 PCGF6Q9BYE7 350 aa24.95■■□□□ 1.59
SCAP-206ENST00000428413 FAM9AQ8IZU1 332 aaPredicted RBP24.86■■□□□ 1.57
SCAP-206ENST00000428413 LOC105371045A0A1W2PR82 267 aa24.69■■□□□ 1.54
SCAP-206ENST00000428413 CHIC1Q5VXU3 224 aa24.63■■□□□ 1.53
SCAP-206ENST00000428413 TTBK1Q5TCY1 1321 aaPredicted RBP24.44■■□□□ 1.5
SCAP-206ENST00000428413 PPARGC1BQ86YN6 1023 aaKnown RBP24.4■■□□□ 1.5
SCAP-206ENST00000428413 TRIM41Q8WV44 630 aa24.18■■□□□ 1.46
SCAP-206ENST00000428413 HRCP23327 699 aa24.05■■□□□ 1.44
SCAP-206ENST00000428413 MYO15BQ96JP2 1530 aa23.99■■□□□ 1.43
SCAP-206ENST00000428413 PELP1Q8IZL8 1130 aaKnown RBP23.94■■□□□ 1.42
SCAP-206ENST00000428413 RANGAP1P46060 587 aaPredicted RBP23.89■■□□□ 1.42
SCAP-206ENST00000428413 ZCCHC6Q5VYS8 1495 aaKnown RBP23.88■■□□□ 1.41
SCAP-206ENST00000428413 ABCC9O60706 1549 aa23.69■■□□□ 1.38
SCAP-206ENST00000428413 CCDC180Q9P1Z9 1646 aa23.65■■□□□ 1.38
SCAP-206ENST00000428413 TRIM26Q12899 539 aaPredicted RBP23.63■■□□□ 1.37
SCAP-206ENST00000428413 CCER1Q8TC90 406 aaPredicted RBP23.46■■□□□ 1.35
SCAP-206ENST00000428413 UBTFP17480 764 aaKnown RBP23.43■■□□□ 1.34
SCAP-206ENST00000428413 PABPN1Q86U42 306 aaKnown RBP eCLIP23.43■■□□□ 1.34
SCAP-206ENST00000428413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.43■■□□□ 1.34
SCAP-206ENST00000428413 SCRIBQ14160 1630 aa23.33■■□□□ 1.33
SCAP-206ENST00000428413 MYT1Q01538 1121 aa23.29■■□□□ 1.32
SCAP-206ENST00000428413 YTHDC1Q96MU7 727 aaKnown RBP23.11■■□□□ 1.29
SCAP-206ENST00000428413 HNRNPUL2Q1KMD3 747 aaKnown RBP23.08■■□□□ 1.29
SCAP-206ENST00000428413 RSF1Q96T23 1441 aaPredicted RBP23.03■■□□□ 1.28
SCAP-206ENST00000428413 APLP2Q06481 763 aa23.03■■□□□ 1.28
SCAP-206ENST00000428413 ZEB1P37275 1124 aaPredicted RBP23.03■■□□□ 1.28
SCAP-206ENST00000428413 CECR2Q9BXF3 1484 aa22.9■■□□□ 1.26
SCAP-206ENST00000428413 ATP1B4Q9UN42 357 aaPredicted RBP22.87■■□□□ 1.25
SCAP-206ENST00000428413 ITGAEP38570 1179 aa22.87■■□□□ 1.25
SCAP-206ENST00000428413 DCAF1Q9Y4B6 1507 aa22.82■■□□□ 1.24
SCAP-206ENST00000428413 RB1CC1Q8TDY2 1594 aa22.68■■□□□ 1.22
SCAP-206ENST00000428413 DIEXFQ68CQ4 756 aaKnown RBP22.65■■□□□ 1.22
SCAP-206ENST00000428413 CSRNP3Q8WYN3 585 aa22.59■■□□□ 1.21
SCAP-206ENST00000428413 SCAF1Q9H7N4 1312 aaKnown RBP22.56■■□□□ 1.2
SCAP-206ENST00000428413 MROH2BQ7Z745 1585 aa22.52■■□□□ 1.2
SCAP-206ENST00000428413 CENPBP07199 599 aaPredicted RBP22.49■■□□□ 1.19
SCAP-206ENST00000428413 GTF3C3Q9Y5Q9 886 aa22.42■■□□□ 1.18
SCAP-206ENST00000428413 NEUROD1Q13562 356 aa22.36■■□□□ 1.17
SCAP-206ENST00000428413 SOGA1O94964 1423 aa22.35■■□□□ 1.17
SCAP-206ENST00000428413 P3H3Q8IVL6 736 aa22.34■■□□□ 1.17
SCAP-206ENST00000428413 ABCC8Q09428 1581 aa22.33■■□□□ 1.16
SCAP-206ENST00000428413 WIZO95785 1651 aa22.31■■□□□ 1.16
SCAP-206ENST00000428413 CCDC88BA6NC98 1476 aa22.25■■□□□ 1.15
SCAP-206ENST00000428413 ACIN1Q9UKV3 1341 aaKnown RBP22.19■■□□□ 1.14
SCAP-206ENST00000428413 CEP162Q5TB80 1403 aa22.18■■□□□ 1.14
SCAP-206ENST00000428413 ZNF316A6NFI3 1004 aaPredicted RBP22.17■■□□□ 1.14
SCAP-206ENST00000428413 CNGB1Q14028 1251 aaPredicted RBP22.16■■□□□ 1.14
SCAP-206ENST00000428413 RUSC2Q8N2Y8 1516 aa22.15■■□□□ 1.14
SCAP-206ENST00000428413 FAM50AQ14320 339 aaKnown RBP22.13■■□□□ 1.13
SCAP-206ENST00000428413 ARID3CA6NKF2 412 aa22.09■■□□□ 1.13
SCAP-206ENST00000428413 MIER1Q8N108 512 aa22.09■■□□□ 1.13
SCAP-206ENST00000428413 NACADO15069 1562 aa22.07■■□□□ 1.12
SCAP-206ENST00000428413 HIRIP3Q9BW71 556 aaPredicted RBP22.01■■□□□ 1.11
SCAP-206ENST00000428413 BCANQ96GW7 911 aa21.95■■□□□ 1.11
SCAP-206ENST00000428413 WRNQ14191 1432 aaPredicted RBP eCLIP21.95■■□□□ 1.1
SCAP-206ENST00000428413 CLIP1P30622 1438 aa21.92■■□□□ 1.1
SCAP-206ENST00000428413 BAZ1AQ9NRL2 1556 aaPredicted RBP21.92■■□□□ 1.1
SCAP-206ENST00000428413 TNIKQ9UKE5 1360 aa21.85■■□□□ 1.09
SCAP-206ENST00000428413 KANK4Q5T7N3 995 aaPredicted RBP21.84■■□□□ 1.09
SCAP-206ENST00000428413 POLR3GLQ9BT43 218 aa21.79■■□□□ 1.08
SCAP-206ENST00000428413 GOLGA3Q08378 1498 aa21.75■■□□□ 1.07
SCAP-206ENST00000428413 DDX10Q13206 875 aaKnown RBP21.7■■□□□ 1.07
SCAP-206ENST00000428413 BAZ1BQ9UIG0 1483 aaKnown RBP21.68■■□□□ 1.06
SCAP-206ENST00000428413 SIN3AQ96ST3 1273 aa21.65■■□□□ 1.06
SCAP-206ENST00000428413 TRIM52Q96A61 297 aa21.62■■□□□ 1.05
SCAP-206ENST00000428413 BCL11AQ9H165 835 aa21.62■■□□□ 1.05
SCAP-206ENST00000428413 CHIC2Q9UKJ5 165 aa21.61■■□□□ 1.05
SCAP-206ENST00000428413 RAPGEF2Q9Y4G8 1499 aa21.6■■□□□ 1.05
SCAP-206ENST00000428413 TOP2AP11388 1531 aaKnown RBP21.59■■□□□ 1.05
SCAP-206ENST00000428413 SENP3-EIF4A1A0A087X0R7 540 aa21.57■■□□□ 1.04
SCAP-206ENST00000428413 SMARCA4P51532 1647 aa21.56■■□□□ 1.04
SCAP-206ENST00000428413 CEP164Q9UPV0 1460 aa21.54■■□□□ 1.04
SCAP-206ENST00000428413 SMARCA2P51531 1590 aa21.53■■□□□ 1.04
SCAP-206ENST00000428413 KCNH8Q96L42 1107 aa21.51■■□□□ 1.03
SCAP-206ENST00000428413 FBLN2P98095 1184 aa21.51■■□□□ 1.03
SCAP-206ENST00000428413 EEA1Q15075 1411 aa21.49■■□□□ 1.03
SCAP-206ENST00000428413 ZNF326Q5BKZ1 582 aaKnown RBP21.49■■□□□ 1.03
SCAP-206ENST00000428413 NEFLP07196 543 aa21.47■■□□□ 1.03
SCAP-206ENST00000428413 VPS8Q8N3P4 1428 aa21.42■■□□□ 1.02
SCAP-206ENST00000428413 ATAD2BQ9ULI0 1458 aa21.4■■□□□ 1.02
SCAP-206ENST00000428413 RRP7BPQ9NSQ0 103 aa21.38■■□□□ 1.01
SCAP-206ENST00000428413 IRX6P78412 446 aaPredicted RBP21.37■■□□□ 1.01
SCAP-206ENST00000428413 FKBP8Q14318 412 aa21.37■■□□□ 1.01
SCAP-206ENST00000428413 ZNF777Q9ULD5 760 aaPredicted RBP21.33■■□□□ 1.01
SCAP-206ENST00000428413 KIF27Q86VH2 1401 aa21.31■■□□□ 1
SCAP-206ENST00000428413 ANP32CO43423 234 aa21.3■■□□□ 1
SCAP-206ENST00000428413 CUX2O14529 1486 aa21.29■■□□□ 1
SCAP-206ENST00000428413 SYNJ1O43426 1573 aa21.27■□□□□ 0.99
SCAP-206ENST00000428413 CCNB3Q8WWL7 1395 aa21.24■□□□□ 0.99
SCAP-206ENST00000428413 FOXD1Q16676 465 aa21.21■□□□□ 0.99
SCAP-206ENST00000428413 CARMIL1Q5VZK9 1371 aa21.2■□□□□ 0.99
SCAP-206ENST00000428413 UNC13AQ9UPW8 1703 aa21.18■□□□□ 0.98
SCAP-206ENST00000428413 DHX57Q6P158 1386 aaKnown RBP21.17■□□□□ 0.98
SCAP-206ENST00000428413 PRKCSHP14314 528 aaPredicted RBP21.17■□□□□ 0.98
SCAP-206ENST00000428413 TONSLQ96HA7 1378 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms