RNA–Protein interactions for RNA: ENST00000310754.5

TRAM1L1-201, Transcript of translocation associated membrane protein 1 like 1, humanhuman

APPRIS P1 BASIC

Gene TRAM1L1, Length 2,023 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1-201ENST00000310754 NISCHQ9Y2I1 1504 aa39.87■■■■□ 3.97
TRAM1L1-201ENST00000310754 CCDC180Q9P1Z9 1646 aa35.01■■■■□ 3.19
TRAM1L1-201ENST00000310754 ZCCHC6Q5VYS8 1495 aaKnown RBP33.76■■■□□ 2.99
TRAM1L1-201ENST00000310754 ABCC9O60706 1549 aa33.6■■■□□ 2.97
TRAM1L1-201ENST00000310754 SHROOM4Q9ULL8 1493 aa33.55■■■□□ 2.96
TRAM1L1-201ENST00000310754 DCAF8L2P0C7V8 631 aa33.08■■■□□ 2.89
TRAM1L1-201ENST00000310754 DCAF1Q9Y4B6 1507 aa32.92■■■□□ 2.86
TRAM1L1-201ENST00000310754 SUPT5HO00267 1087 aaKnown RBP32.89■■■□□ 2.85
TRAM1L1-201ENST00000310754 MYO15BQ96JP2 1530 aa32.75■■■□□ 2.83
TRAM1L1-201ENST00000310754 NACADO15069 1562 aa32.73■■■□□ 2.83
TRAM1L1-201ENST00000310754 RB1CC1Q8TDY2 1594 aa32.59■■■□□ 2.81
TRAM1L1-201ENST00000310754 SCRIBQ14160 1630 aa32.11■■■□□ 2.73
TRAM1L1-201ENST00000310754 CHIC1Q5VXU3 224 aa32.1■■■□□ 2.73
TRAM1L1-201ENST00000310754 UNC13AQ9UPW8 1703 aa31.94■■■□□ 2.7
TRAM1L1-201ENST00000310754 BICRAQ9NZM4 1560 aa31.62■■■□□ 2.65
TRAM1L1-201ENST00000310754 PABPN1Q86U42 306 aaKnown RBP eCLIP31.58■■■□□ 2.65
TRAM1L1-201ENST00000310754 RSF1Q96T23 1441 aaPredicted RBP31.46■■■□□ 2.63
TRAM1L1-201ENST00000310754 HRCP23327 699 aa31.03■■■□□ 2.56
TRAM1L1-201ENST00000310754 CECR2Q9BXF3 1484 aa31.01■■■□□ 2.55
TRAM1L1-201ENST00000310754 LOC105371045A0A1W2PR82 267 aa30.97■■■□□ 2.55
TRAM1L1-201ENST00000310754 PCGF6Q9BYE7 350 aa30.91■■■□□ 2.54
TRAM1L1-201ENST00000310754 MROH2BQ7Z745 1585 aa30.9■■■□□ 2.54
TRAM1L1-201ENST00000310754 BAZ1AQ9NRL2 1556 aaPredicted RBP30.8■■■□□ 2.52
TRAM1L1-201ENST00000310754 TRIM41Q8WV44 630 aa30.78■■■□□ 2.52
TRAM1L1-201ENST00000310754 SMARCA4P51532 1647 aa30.75■■■□□ 2.51
TRAM1L1-201ENST00000310754 EIF4G1Q04637 1599 aaKnown RBP30.71■■■□□ 2.51
TRAM1L1-201ENST00000310754 WIZO95785 1651 aa30.71■■■□□ 2.51
TRAM1L1-201ENST00000310754 TRIM26Q12899 539 aaPredicted RBP30.53■■■□□ 2.48
TRAM1L1-201ENST00000310754 CC2D2AQ9P2K1 1620 aa30.41■■■□□ 2.46
TRAM1L1-201ENST00000310754 PEG3Q9GZU2 1588 aa30.39■■■□□ 2.46
TRAM1L1-201ENST00000310754 TOP2AP11388 1531 aaKnown RBP30.38■■■□□ 2.45
TRAM1L1-201ENST00000310754 ATAD2BQ9ULI0 1458 aa30.37■■■□□ 2.45
TRAM1L1-201ENST00000310754 SMARCA2P51531 1590 aa30.34■■■□□ 2.45
TRAM1L1-201ENST00000310754 FAM9AQ8IZU1 332 aaPredicted RBP30.32■■■□□ 2.44
TRAM1L1-201ENST00000310754 NCAPD3P42695 1498 aa30.21■■■□□ 2.43
TRAM1L1-201ENST00000310754 BAZ1BQ9UIG0 1483 aaKnown RBP30.17■■■□□ 2.42
TRAM1L1-201ENST00000310754 DNAJC5BQ9UF47 199 aa30.17■■■□□ 2.42
TRAM1L1-201ENST00000310754 PPARGC1BQ86YN6 1023 aaKnown RBP30.15■■■□□ 2.42
TRAM1L1-201ENST00000310754 CCDC88BA6NC98 1476 aa30.13■■■□□ 2.41
TRAM1L1-201ENST00000310754 HMGXB3Q12766 1538 aa30.12■■■□□ 2.41
TRAM1L1-201ENST00000310754 ZEB1P37275 1124 aaPredicted RBP29.95■■■□□ 2.38
TRAM1L1-201ENST00000310754 ABCC8Q09428 1581 aa29.94■■■□□ 2.38
TRAM1L1-201ENST00000310754 EHMT2Q96KQ7 1210 aa29.89■■■□□ 2.38
TRAM1L1-201ENST00000310754 EEA1Q15075 1411 aa29.76■■■□□ 2.35
TRAM1L1-201ENST00000310754 WRNQ14191 1432 aaPredicted RBP eCLIP29.65■■■□□ 2.34
TRAM1L1-201ENST00000310754 SOGA1O94964 1423 aa29.65■■■□□ 2.34
TRAM1L1-201ENST00000310754 TNIKQ9UKE5 1360 aa29.59■■■□□ 2.33
TRAM1L1-201ENST00000310754 CEP162Q5TB80 1403 aa29.57■■■□□ 2.32
TRAM1L1-201ENST00000310754 CSRNP3Q8WYN3 585 aa29.52■■■□□ 2.32
TRAM1L1-201ENST00000310754 RUSC2Q8N2Y8 1516 aa29.46■■■□□ 2.31
TRAM1L1-201ENST00000310754 GOLGA3Q08378 1498 aa29.45■■■□□ 2.3
TRAM1L1-201ENST00000310754 SYNJ1O43426 1573 aa29.4■■■□□ 2.3
TRAM1L1-201ENST00000310754 CADPSQ9ULU8 1353 aa29.4■■■□□ 2.3
TRAM1L1-201ENST00000310754 CFTRP13569 1480 aa29.38■■■□□ 2.29
TRAM1L1-201ENST00000310754 NESP48681 1621 aa29.33■■■□□ 2.29
TRAM1L1-201ENST00000310754 KIF21BO75037 1637 aa29.32■■■□□ 2.28
TRAM1L1-201ENST00000310754 CEP164Q9UPV0 1460 aa29.3■■■□□ 2.28
TRAM1L1-201ENST00000310754 UBTFP17480 764 aaKnown RBP29.28■■■□□ 2.28
TRAM1L1-201ENST00000310754 LAMC3Q9Y6N6 1575 aa29.28■■■□□ 2.28
TRAM1L1-201ENST00000310754 PRDM2Q13029 1718 aa29.22■■■□□ 2.27
TRAM1L1-201ENST00000310754 TOP2BQ02880 1626 aa29.15■■■□□ 2.26
TRAM1L1-201ENST00000310754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.14■■■□□ 2.26
TRAM1L1-201ENST00000310754 CCER1Q8TC90 406 aaPredicted RBP29.14■■■□□ 2.26
TRAM1L1-201ENST00000310754 BIVM-ERCC5R4GMW8 1640 aa29.08■■■□□ 2.25
TRAM1L1-201ENST00000310754 FANCD2Q9BXW9 1451 aa29.07■■■□□ 2.24
TRAM1L1-201ENST00000310754 PDS5BQ9NTI5 1447 aa29.06■■■□□ 2.24
TRAM1L1-201ENST00000310754 CLIP1P30622 1438 aa29.04■■■□□ 2.24
TRAM1L1-201ENST00000310754 KIF21AQ7Z4S6 1674 aa28.99■■■□□ 2.23
TRAM1L1-201ENST00000310754 RAPGEF2Q9Y4G8 1499 aa28.98■■■□□ 2.23
TRAM1L1-201ENST00000310754 TTBK1Q5TCY1 1321 aaPredicted RBP28.97■■■□□ 2.23
TRAM1L1-201ENST00000310754 VPS8Q8N3P4 1428 aa28.96■■■□□ 2.23
TRAM1L1-201ENST00000310754 ERICH3Q5RHP9 1530 aa28.89■■■□□ 2.22
TRAM1L1-201ENST00000310754 ERCC6Q03468 1493 aa28.86■■■□□ 2.21
TRAM1L1-201ENST00000310754 PRXQ9BXM0 1461 aa28.82■■■□□ 2.2
TRAM1L1-201ENST00000310754 CUX1P39880 1505 aa28.8■■■□□ 2.2
TRAM1L1-201ENST00000310754 URB2Q14146 1524 aaKnown RBP28.74■■■□□ 2.19
TRAM1L1-201ENST00000310754 MRC2Q9UBG0 1479 aa28.72■■■□□ 2.19
TRAM1L1-201ENST00000310754 DNMBPQ6XZF7 1577 aa28.71■■■□□ 2.19
TRAM1L1-201ENST00000310754 TOPBP1Q92547 1522 aa28.69■■■□□ 2.18
TRAM1L1-201ENST00000310754 APLP2Q06481 763 aa28.69■■■□□ 2.18
TRAM1L1-201ENST00000310754 KIF27Q86VH2 1401 aa28.69■■■□□ 2.18
TRAM1L1-201ENST00000310754 THOC2Q8NI27 1593 aaKnown RBP28.65■■■□□ 2.18
TRAM1L1-201ENST00000310754 ARAP1Q96P48 1450 aa28.6■■■□□ 2.17
TRAM1L1-201ENST00000310754 WDR62O43379 1518 aa28.6■■■□□ 2.17
TRAM1L1-201ENST00000310754 FGD5Q6ZNL6 1462 aa28.56■■■□□ 2.16
TRAM1L1-201ENST00000310754 DIEXFQ68CQ4 756 aaKnown RBP28.55■■■□□ 2.16
TRAM1L1-201ENST00000310754 HNRNPUL2Q1KMD3 747 aaKnown RBP28.52■■■□□ 2.16
TRAM1L1-201ENST00000310754 POLA1P09884 1462 aaPredicted RBP28.51■■■□□ 2.15
TRAM1L1-201ENST00000310754 RANGAP1P46060 587 aaPredicted RBP28.48■■■□□ 2.15
TRAM1L1-201ENST00000310754 SCAF1Q9H7N4 1312 aaKnown RBP28.43■■■□□ 2.14
TRAM1L1-201ENST00000310754 RAD54L2Q9Y4B4 1467 aa28.42■■■□□ 2.14
TRAM1L1-201ENST00000310754 ZNF316A6NFI3 1004 aaPredicted RBP28.42■■■□□ 2.14
TRAM1L1-201ENST00000310754 CUX2O14529 1486 aa28.39■■■□□ 2.14
TRAM1L1-201ENST00000310754 ARHGAP35Q9NRY4 1499 aa28.36■■■□□ 2.13
TRAM1L1-201ENST00000310754 TARBP1Q13395 1621 aaKnown RBP28.32■■■□□ 2.12
TRAM1L1-201ENST00000310754 IGF1RP08069 1367 aa28.32■■■□□ 2.12
TRAM1L1-201ENST00000310754 RRBP1Q9P2E9 1410 aaKnown RBP28.31■■■□□ 2.12
TRAM1L1-201ENST00000310754 ABCA10Q8WWZ4 1543 aa28.29■■■□□ 2.12
TRAM1L1-201ENST00000310754 ACIN1Q9UKV3 1341 aaKnown RBP28.29■■■□□ 2.12
TRAM1L1-201ENST00000310754 CLSPNQ9HAW4 1339 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms