RNA–Protein interactions for RNA: ENST00000265969.7

KCNC1-201, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene KCNC1, Length 4,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-201ENST00000265969 NISCHQ9Y2I1 1504 aa28.96■■■□□ 2.23
KCNC1-201ENST00000265969 DCAF8L2P0C7V8 631 aa27.17■■□□□ 1.94
KCNC1-201ENST00000265969 SHROOM4Q9ULL8 1493 aa26.32■■□□□ 1.8
KCNC1-201ENST00000265969 SUPT5HO00267 1087 aaKnown RBP26.01■■□□□ 1.75
KCNC1-201ENST00000265969 PELP1Q8IZL8 1130 aaKnown RBP24.89■■□□□ 1.58
KCNC1-201ENST00000265969 EHMT2Q96KQ7 1210 aa24.7■■□□□ 1.55
KCNC1-201ENST00000265969 ABCC9O60706 1549 aa24.49■■□□□ 1.51
KCNC1-201ENST00000265969 PCGF6Q9BYE7 350 aa24.49■■□□□ 1.51
KCNC1-201ENST00000265969 FAM9AQ8IZU1 332 aaPredicted RBP24.36■■□□□ 1.49
KCNC1-201ENST00000265969 MYT1Q01538 1121 aa24.28■■□□□ 1.48
KCNC1-201ENST00000265969 HRCP23327 699 aa24.19■■□□□ 1.46
KCNC1-201ENST00000265969 PPARGC1BQ86YN6 1023 aaKnown RBP24.16■■□□□ 1.46
KCNC1-201ENST00000265969 ZCCHC6Q5VYS8 1495 aaKnown RBP24.14■■□□□ 1.46
KCNC1-201ENST00000265969 CCDC180Q9P1Z9 1646 aa24.07■■□□□ 1.44
KCNC1-201ENST00000265969 TRIM41Q8WV44 630 aa24.01■■□□□ 1.43
KCNC1-201ENST00000265969 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
KCNC1-201ENST00000265969 PABPN1Q86U42 306 aaKnown RBP eCLIP23.92■■□□□ 1.42
KCNC1-201ENST00000265969 TTBK1Q5TCY1 1321 aaPredicted RBP23.72■■□□□ 1.39
KCNC1-201ENST00000265969 LOC105371045A0A1W2PR82 267 aa23.71■■□□□ 1.39
KCNC1-201ENST00000265969 SCRIBQ14160 1630 aa23.68■■□□□ 1.38
KCNC1-201ENST00000265969 RANGAP1P46060 587 aaPredicted RBP23.62■■□□□ 1.37
KCNC1-201ENST00000265969 CENPBP07199 599 aaPredicted RBP23.51■■□□□ 1.35
KCNC1-201ENST00000265969 UBTFP17480 764 aaKnown RBP23.36■■□□□ 1.33
KCNC1-201ENST00000265969 YTHDC1Q96MU7 727 aaKnown RBP23.3■■□□□ 1.32
KCNC1-201ENST00000265969 ZEB1P37275 1124 aaPredicted RBP23.2■■□□□ 1.3
KCNC1-201ENST00000265969 APLP2Q06481 763 aa23.2■■□□□ 1.3
KCNC1-201ENST00000265969 SCAF1Q9H7N4 1312 aaKnown RBP23.16■■□□□ 1.3
KCNC1-201ENST00000265969 GTF3C3Q9Y5Q9 886 aa23.11■■□□□ 1.29
KCNC1-201ENST00000265969 DCAF1Q9Y4B6 1507 aa23.07■■□□□ 1.28
KCNC1-201ENST00000265969 RSF1Q96T23 1441 aaPredicted RBP23.03■■□□□ 1.28
KCNC1-201ENST00000265969 RB1CC1Q8TDY2 1594 aa22.99■■□□□ 1.27
KCNC1-201ENST00000265969 NACADO15069 1562 aa22.99■■□□□ 1.27
KCNC1-201ENST00000265969 ATP1B4Q9UN42 357 aaPredicted RBP22.95■■□□□ 1.26
KCNC1-201ENST00000265969 CECR2Q9BXF3 1484 aa22.93■■□□□ 1.26
KCNC1-201ENST00000265969 CCER1Q8TC90 406 aaPredicted RBP22.91■■□□□ 1.26
KCNC1-201ENST00000265969 TRIM26Q12899 539 aaPredicted RBP22.89■■□□□ 1.25
KCNC1-201ENST00000265969 MYO15BQ96JP2 1530 aa22.86■■□□□ 1.25
KCNC1-201ENST00000265969 ACIN1Q9UKV3 1341 aaKnown RBP22.79■■□□□ 1.24
KCNC1-201ENST00000265969 ERICH6Q7L0X2 663 aa22.76■■□□□ 1.23
KCNC1-201ENST00000265969 NEUROD1Q13562 356 aa22.65■■□□□ 1.22
KCNC1-201ENST00000265969 MROH2BQ7Z745 1585 aa22.61■■□□□ 1.21
KCNC1-201ENST00000265969 DIEXFQ68CQ4 756 aaKnown RBP22.57■■□□□ 1.2
KCNC1-201ENST00000265969 CSRNP3Q8WYN3 585 aa22.54■■□□□ 1.2
KCNC1-201ENST00000265969 HNRNPUL2Q1KMD3 747 aaKnown RBP22.53■■□□□ 1.2
KCNC1-201ENST00000265969 ITGAEP38570 1179 aa22.51■■□□□ 1.19
KCNC1-201ENST00000265969 BAZ1AQ9NRL2 1556 aaPredicted RBP22.45■■□□□ 1.18
KCNC1-201ENST00000265969 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.44■■□□□ 1.18
KCNC1-201ENST00000265969 WIZO95785 1651 aa22.33■■□□□ 1.17
KCNC1-201ENST00000265969 BCL11AQ9H165 835 aa22.33■■□□□ 1.17
KCNC1-201ENST00000265969 BAZ1BQ9UIG0 1483 aaKnown RBP22.3■■□□□ 1.16
KCNC1-201ENST00000265969 P3H3Q8IVL6 736 aa22.26■■□□□ 1.15
KCNC1-201ENST00000265969 CCDC88BA6NC98 1476 aa22.19■■□□□ 1.14
KCNC1-201ENST00000265969 BCANQ96GW7 911 aa22.18■■□□□ 1.14
KCNC1-201ENST00000265969 WRNQ14191 1432 aaPredicted RBP eCLIP22.14■■□□□ 1.14
KCNC1-201ENST00000265969 NEFLP07196 543 aa22.14■■□□□ 1.14
KCNC1-201ENST00000265969 ABCC8Q09428 1581 aa22.13■■□□□ 1.13
KCNC1-201ENST00000265969 FBLN2P98095 1184 aa22.07■■□□□ 1.12
KCNC1-201ENST00000265969 SOGA1O94964 1423 aa22.06■■□□□ 1.12
KCNC1-201ENST00000265969 ARID3CA6NKF2 412 aa22.04■■□□□ 1.12
KCNC1-201ENST00000265969 FAM50AQ14320 339 aaKnown RBP22.02■■□□□ 1.12
KCNC1-201ENST00000265969 SMARCA4P51532 1647 aa21.99■■□□□ 1.11
KCNC1-201ENST00000265969 TOP2AP11388 1531 aaKnown RBP21.95■■□□□ 1.1
KCNC1-201ENST00000265969 ANP32EQ9BTT0 268 aa21.92■■□□□ 1.1
KCNC1-201ENST00000265969 CEP162Q5TB80 1403 aa21.91■■□□□ 1.1
KCNC1-201ENST00000265969 ATAD2BQ9ULI0 1458 aa21.9■■□□□ 1.1
KCNC1-201ENST00000265969 CLIP1P30622 1438 aa21.85■■□□□ 1.09
KCNC1-201ENST00000265969 SMARCA2P51531 1590 aa21.82■■□□□ 1.08
KCNC1-201ENST00000265969 GOLGA3Q08378 1498 aa21.79■■□□□ 1.08
KCNC1-201ENST00000265969 EEA1Q15075 1411 aa21.77■■□□□ 1.08
KCNC1-201ENST00000265969 RUSC2Q8N2Y8 1516 aa21.73■■□□□ 1.07
KCNC1-201ENST00000265969 TNIKQ9UKE5 1360 aa21.72■■□□□ 1.07
KCNC1-201ENST00000265969 ZNF316A6NFI3 1004 aaPredicted RBP21.72■■□□□ 1.07
KCNC1-201ENST00000265969 KIF27Q86VH2 1401 aa21.68■■□□□ 1.06
KCNC1-201ENST00000265969 CEP164Q9UPV0 1460 aa21.66■■□□□ 1.06
KCNC1-201ENST00000265969 EIF5BO60841 1220 aaKnown RBP21.64■■□□□ 1.05
KCNC1-201ENST00000265969 RTL5Q5HYW3 569 aaPredicted RBP21.61■■□□□ 1.05
KCNC1-201ENST00000265969 CUX2O14529 1486 aa21.6■■□□□ 1.05
KCNC1-201ENST00000265969 MYT1LQ9UL68 1186 aa21.6■■□□□ 1.05
KCNC1-201ENST00000265969 TRIM52Q96A61 297 aa21.59■■□□□ 1.05
KCNC1-201ENST00000265969 MIER1Q8N108 512 aa21.58■■□□□ 1.04
KCNC1-201ENST00000265969 BICRAQ9NZM4 1560 aa21.57■■□□□ 1.04
KCNC1-201ENST00000265969 CNGB1Q14028 1251 aaPredicted RBP21.52■■□□□ 1.04
KCNC1-201ENST00000265969 CADPSQ9ULU8 1353 aa21.52■■□□□ 1.04
KCNC1-201ENST00000265969 PRKCSHP14314 528 aaPredicted RBP21.51■■□□□ 1.03
KCNC1-201ENST00000265969 EIF4G1Q04637 1599 aaKnown RBP21.5■■□□□ 1.03
KCNC1-201ENST00000265969 POLR3GLQ9BT43 218 aa21.49■■□□□ 1.03
KCNC1-201ENST00000265969 ZNF777Q9ULD5 760 aaPredicted RBP21.48■■□□□ 1.03
KCNC1-201ENST00000265969 FKBP8Q14318 412 aa21.48■■□□□ 1.03
KCNC1-201ENST00000265969 CARMIL1Q5VZK9 1371 aa21.47■■□□□ 1.03
KCNC1-201ENST00000265969 CHMP7Q8WUX9 453 aaPredicted RBP21.46■■□□□ 1.03
KCNC1-201ENST00000265969 TDRD9Q8NDG6 1382 aaKnown RBP21.45■■□□□ 1.02
KCNC1-201ENST00000265969 RAPGEF2Q9Y4G8 1499 aa21.43■■□□□ 1.02
KCNC1-201ENST00000265969 CHIC2Q9UKJ5 165 aa21.42■■□□□ 1.02
KCNC1-201ENST00000265969 NBR1Q14596 966 aa21.41■■□□□ 1.02
KCNC1-201ENST00000265969 UNC13AQ9UPW8 1703 aa21.39■■□□□ 1.01
KCNC1-201ENST00000265969 NCAPD3P42695 1498 aa21.38■■□□□ 1.01
KCNC1-201ENST00000265969 KANK4Q5T7N3 995 aaPredicted RBP21.37■■□□□ 1.01
KCNC1-201ENST00000265969 MTUS2Q5JR59 1369 aa21.36■■□□□ 1.01
KCNC1-201ENST00000265969 CDK11AQ9UQ88 783 aaPredicted RBP21.35■■□□□ 1.01
KCNC1-201ENST00000265969 ERCC6Q03468 1493 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms