Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCP4L1A6NKN8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCP4L1A6NKN8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCP4L1A6NKN8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCP4L1A6NKN8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.69■□□□□ 0.1
PCP4L1A6NKN8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.69■□□□□ 0.1
PCP4L1A6NKN8 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCP4L1A6NKN8 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PCP4L1A6NKN8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCP4L1A6NKN8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCP4L1A6NKN8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCP4L1A6NKN8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PCP4L1A6NKN8 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 AC126755.1-201ENST00000525846 6405 ntBASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCP4L1A6NKN8 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms