RNA–Protein interactions for RNA: ENST00000220772.7

SFRP1-201, Transcript of secreted frizzled related protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFRP1, Length 4,492 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFRP1-201ENST00000220772 NISCHQ9Y2I1 1504 aa29.11■■■□□ 2.25
SFRP1-201ENST00000220772 DCAF8L2P0C7V8 631 aa28.57■■■□□ 2.16
SFRP1-201ENST00000220772 SUPT5HO00267 1087 aaKnown RBP27.81■■■□□ 2.04
SFRP1-201ENST00000220772 SHROOM4Q9ULL8 1493 aa27.5■■□□□ 1.99
SFRP1-201ENST00000220772 EHMT2Q96KQ7 1210 aa26.46■■□□□ 1.83
SFRP1-201ENST00000220772 PCGF6Q9BYE7 350 aa26.21■■□□□ 1.79
SFRP1-201ENST00000220772 FAM9AQ8IZU1 332 aaPredicted RBP26.09■■□□□ 1.77
SFRP1-201ENST00000220772 TRIM41Q8WV44 630 aa25.74■■□□□ 1.71
SFRP1-201ENST00000220772 APLP2Q06481 763 aa25.61■■□□□ 1.69
SFRP1-201ENST00000220772 TTBK1Q5TCY1 1321 aaPredicted RBP25.6■■□□□ 1.69
SFRP1-201ENST00000220772 ZEB1P37275 1124 aaPredicted RBP25.47■■□□□ 1.67
SFRP1-201ENST00000220772 CHIC1Q5VXU3 224 aa25.43■■□□□ 1.66
SFRP1-201ENST00000220772 PELP1Q8IZL8 1130 aaKnown RBP25.39■■□□□ 1.65
SFRP1-201ENST00000220772 HRCP23327 699 aa25.35■■□□□ 1.65
SFRP1-201ENST00000220772 CCER1Q8TC90 406 aaPredicted RBP25.31■■□□□ 1.64
SFRP1-201ENST00000220772 LOC105371045A0A1W2PR82 267 aa25.24■■□□□ 1.63
SFRP1-201ENST00000220772 TRIM26Q12899 539 aaPredicted RBP25.19■■□□□ 1.62
SFRP1-201ENST00000220772 RANGAP1P46060 587 aaPredicted RBP25.18■■□□□ 1.62
SFRP1-201ENST00000220772 UBTFP17480 764 aaKnown RBP25.15■■□□□ 1.62
SFRP1-201ENST00000220772 PPARGC1BQ86YN6 1023 aaKnown RBP25.11■■□□□ 1.61
SFRP1-201ENST00000220772 CENPBP07199 599 aaPredicted RBP25.07■■□□□ 1.6
SFRP1-201ENST00000220772 ATP1B4Q9UN42 357 aaPredicted RBP24.7■■□□□ 1.54
SFRP1-201ENST00000220772 MYT1Q01538 1121 aa24.67■■□□□ 1.54
SFRP1-201ENST00000220772 YTHDC1Q96MU7 727 aaKnown RBP24.64■■□□□ 1.54
SFRP1-201ENST00000220772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.42■■□□□ 1.5
SFRP1-201ENST00000220772 HNRNPUL2Q1KMD3 747 aaKnown RBP24.41■■□□□ 1.5
SFRP1-201ENST00000220772 ABCC9O60706 1549 aa24.29■■□□□ 1.48
SFRP1-201ENST00000220772 ITGAEP38570 1179 aa24.29■■□□□ 1.48
SFRP1-201ENST00000220772 ZCCHC6Q5VYS8 1495 aaKnown RBP24.23■■□□□ 1.47
SFRP1-201ENST00000220772 NEFLP07196 543 aa24.19■■□□□ 1.46
SFRP1-201ENST00000220772 DIEXFQ68CQ4 756 aaKnown RBP24.17■■□□□ 1.46
SFRP1-201ENST00000220772 PABPN1Q86U42 306 aaKnown RBP eCLIP24.1■■□□□ 1.45
SFRP1-201ENST00000220772 ERICH6Q7L0X2 663 aa24.09■■□□□ 1.45
SFRP1-201ENST00000220772 SCAF1Q9H7N4 1312 aaKnown RBP23.88■■□□□ 1.41
SFRP1-201ENST00000220772 DCAF1Q9Y4B6 1507 aa23.86■■□□□ 1.41
SFRP1-201ENST00000220772 CSRNP3Q8WYN3 585 aa23.83■■□□□ 1.41
SFRP1-201ENST00000220772 GTF3C3Q9Y5Q9 886 aa23.83■■□□□ 1.41
SFRP1-201ENST00000220772 MYO15BQ96JP2 1530 aa23.73■■□□□ 1.39
SFRP1-201ENST00000220772 SCRIBQ14160 1630 aa23.71■■□□□ 1.39
SFRP1-201ENST00000220772 CCDC180Q9P1Z9 1646 aa23.71■■□□□ 1.39
SFRP1-201ENST00000220772 FAM50AQ14320 339 aaKnown RBP23.7■■□□□ 1.38
SFRP1-201ENST00000220772 ZNF316A6NFI3 1004 aaPredicted RBP23.7■■□□□ 1.38
SFRP1-201ENST00000220772 ACIN1Q9UKV3 1341 aaKnown RBP23.69■■□□□ 1.38
SFRP1-201ENST00000220772 POLR3GLQ9BT43 218 aa23.66■■□□□ 1.38
SFRP1-201ENST00000220772 NEUROD1Q13562 356 aa23.57■■□□□ 1.36
SFRP1-201ENST00000220772 CNGB1Q14028 1251 aaPredicted RBP23.55■■□□□ 1.36
SFRP1-201ENST00000220772 RSF1Q96T23 1441 aaPredicted RBP23.44■■□□□ 1.34
SFRP1-201ENST00000220772 TRIM52Q96A61 297 aa23.4■■□□□ 1.34
SFRP1-201ENST00000220772 P3H3Q8IVL6 736 aa23.34■■□□□ 1.33
SFRP1-201ENST00000220772 BCANQ96GW7 911 aa23.31■■□□□ 1.32
SFRP1-201ENST00000220772 ANP32CO43423 234 aa23.29■■□□□ 1.32
SFRP1-201ENST00000220772 MYT1LQ9UL68 1186 aa23.27■■□□□ 1.32
SFRP1-201ENST00000220772 DAXXQ9UER7 740 aaPredicted RBP23.11■■□□□ 1.29
SFRP1-201ENST00000220772 ZNF326Q5BKZ1 582 aaKnown RBP23.08■■□□□ 1.29
SFRP1-201ENST00000220772 CLIP1P30622 1438 aa23.04■■□□□ 1.28
SFRP1-201ENST00000220772 ARID3CA6NKF2 412 aa23.04■■□□□ 1.28
SFRP1-201ENST00000220772 CEP162Q5TB80 1403 aa23.03■■□□□ 1.28
SFRP1-201ENST00000220772 MIER1Q8N108 512 aa22.99■■□□□ 1.27
SFRP1-201ENST00000220772 EEA1Q15075 1411 aa22.98■■□□□ 1.27
SFRP1-201ENST00000220772 DDX10Q13206 875 aaKnown RBP22.96■■□□□ 1.27
SFRP1-201ENST00000220772 FBLN2P98095 1184 aa22.96■■□□□ 1.27
SFRP1-201ENST00000220772 CDK11AQ9UQ88 783 aaPredicted RBP22.94■■□□□ 1.26
SFRP1-201ENST00000220772 CECR2Q9BXF3 1484 aa22.93■■□□□ 1.26
SFRP1-201ENST00000220772 RB1CC1Q8TDY2 1594 aa22.91■■□□□ 1.26
SFRP1-201ENST00000220772 GOLGA3Q08378 1498 aa22.9■■□□□ 1.26
SFRP1-201ENST00000220772 NACADO15069 1562 aa22.9■■□□□ 1.26
SFRP1-201ENST00000220772 TONSLQ96HA7 1378 aa22.9■■□□□ 1.26
SFRP1-201ENST00000220772 TNIKQ9UKE5 1360 aa22.89■■□□□ 1.26
SFRP1-201ENST00000220772 SLC4A1APQ9BWU0 796 aaKnown RBP22.88■■□□□ 1.25
SFRP1-201ENST00000220772 CLSPNQ9HAW4 1339 aa22.87■■□□□ 1.25
SFRP1-201ENST00000220772 WRNQ14191 1432 aaPredicted RBP eCLIP22.87■■□□□ 1.25
SFRP1-201ENST00000220772 RTL5Q5HYW3 569 aaPredicted RBP22.85■■□□□ 1.25
SFRP1-201ENST00000220772 FKBP8Q14318 412 aa22.85■■□□□ 1.25
SFRP1-201ENST00000220772 ZNF777Q9ULD5 760 aaPredicted RBP22.79■■□□□ 1.24
SFRP1-201ENST00000220772 HNRNPUQ00839 825 aaKnown RBP eCLIP22.74■■□□□ 1.23
SFRP1-201ENST00000220772 CHIC2Q9UKJ5 165 aa22.72■■□□□ 1.23
SFRP1-201ENST00000220772 BAZ1AQ9NRL2 1556 aaPredicted RBP22.72■■□□□ 1.23
SFRP1-201ENST00000220772 HIRIP3Q9BW71 556 aaPredicted RBP22.69■■□□□ 1.22
SFRP1-201ENST00000220772 CEP164Q9UPV0 1460 aa22.69■■□□□ 1.22
SFRP1-201ENST00000220772 SOGA1O94964 1423 aa22.67■■□□□ 1.22
SFRP1-201ENST00000220772 MTUS2Q5JR59 1369 aa22.65■■□□□ 1.22
SFRP1-201ENST00000220772 MROH2BQ7Z745 1585 aa22.63■■□□□ 1.21
SFRP1-201ENST00000220772 FAM9BQ8IZU0 186 aa22.62■■□□□ 1.21
SFRP1-201ENST00000220772 BAZ1BQ9UIG0 1483 aaKnown RBP22.61■■□□□ 1.21
SFRP1-201ENST00000220772 KIF27Q86VH2 1401 aa22.55■■□□□ 1.2
SFRP1-201ENST00000220772 ANP32EQ9BTT0 268 aa22.51■■□□□ 1.19
SFRP1-201ENST00000220772 RRP7BPQ9NSQ0 103 aa22.49■■□□□ 1.19
SFRP1-201ENST00000220772 BCL11AQ9H165 835 aa22.48■■□□□ 1.19
SFRP1-201ENST00000220772 CCDC88BA6NC98 1476 aa22.47■■□□□ 1.19
SFRP1-201ENST00000220772 MRS2Q9HD23 443 aa22.47■■□□□ 1.19
SFRP1-201ENST00000220772 ANP32AP39687 249 aaKnown RBP22.46■■□□□ 1.19
SFRP1-201ENST00000220772 ABCC8Q09428 1581 aa22.44■■□□□ 1.18
SFRP1-201ENST00000220772 EIF4G2P78344 907 aaKnown RBP eCLIP22.43■■□□□ 1.18
SFRP1-201ENST00000220772 SIN3AQ96ST3 1273 aa22.41■■□□□ 1.18
SFRP1-201ENST00000220772 TMC1Q8TDI8 760 aa22.4■■□□□ 1.18
SFRP1-201ENST00000220772 IRX6P78412 446 aaPredicted RBP22.39■■□□□ 1.18
SFRP1-201ENST00000220772 SALL2Q9Y467 1007 aaPredicted RBP22.39■■□□□ 1.18
SFRP1-201ENST00000220772 CANXP27824 592 aaKnown RBP22.37■■□□□ 1.17
SFRP1-201ENST00000220772 NPM2Q86SE8 214 aaKnown RBP22.37■■□□□ 1.17
SFRP1-201ENST00000220772 VPS8Q8N3P4 1428 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms