RNA–Protein interactions for RNA: ENST00000377533.7

SCRIB-203, Transcript of scribbled planar cell polarity protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCRIB, Length 5,108 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-203ENST00000377533 DCAF8L2P0C7V8 631 aa30.05■■■□□ 2.4
SCRIB-203ENST00000377533 NISCHQ9Y2I1 1504 aa29.41■■■□□ 2.3
SCRIB-203ENST00000377533 SUPT5HO00267 1087 aaKnown RBP28.38■■■□□ 2.13
SCRIB-203ENST00000377533 SHROOM4Q9ULL8 1493 aa27.98■■■□□ 2.07
SCRIB-203ENST00000377533 EHMT2Q96KQ7 1210 aa27.14■■□□□ 1.94
SCRIB-203ENST00000377533 APLP2Q06481 763 aa26.98■■□□□ 1.91
SCRIB-203ENST00000377533 FAM9AQ8IZU1 332 aaPredicted RBP26.73■■□□□ 1.87
SCRIB-203ENST00000377533 TRIM41Q8WV44 630 aa26.43■■□□□ 1.82
SCRIB-203ENST00000377533 PELP1Q8IZL8 1130 aaKnown RBP26.27■■□□□ 1.8
SCRIB-203ENST00000377533 TTBK1Q5TCY1 1321 aaPredicted RBP26.21■■□□□ 1.79
SCRIB-203ENST00000377533 PCGF6Q9BYE7 350 aa26.15■■□□□ 1.78
SCRIB-203ENST00000377533 RANGAP1P46060 587 aaPredicted RBP26.14■■□□□ 1.78
SCRIB-203ENST00000377533 UBTFP17480 764 aaKnown RBP26.07■■□□□ 1.76
SCRIB-203ENST00000377533 ATP1B4Q9UN42 357 aaPredicted RBP26■■□□□ 1.75
SCRIB-203ENST00000377533 ZEB1P37275 1124 aaPredicted RBP25.96■■□□□ 1.75
SCRIB-203ENST00000377533 CCER1Q8TC90 406 aaPredicted RBP25.81■■□□□ 1.72
SCRIB-203ENST00000377533 CENPBP07199 599 aaPredicted RBP25.53■■□□□ 1.68
SCRIB-203ENST00000377533 ABCC9O60706 1549 aa25.34■■□□□ 1.65
SCRIB-203ENST00000377533 CHIC1Q5VXU3 224 aa25.31■■□□□ 1.64
SCRIB-203ENST00000377533 TRIM26Q12899 539 aaPredicted RBP25.3■■□□□ 1.64
SCRIB-203ENST00000377533 PPARGC1BQ86YN6 1023 aaKnown RBP25.29■■□□□ 1.64
SCRIB-203ENST00000377533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.22■■□□□ 1.63
SCRIB-203ENST00000377533 HNRNPUL2Q1KMD3 747 aaKnown RBP25.22■■□□□ 1.63
SCRIB-203ENST00000377533 PABPN1Q86U42 306 aaKnown RBP eCLIP25.12■■□□□ 1.614e-7■■□□□ 14.5
SCRIB-203ENST00000377533 LOC105371045A0A1W2PR82 267 aa25.1■■□□□ 1.61
SCRIB-203ENST00000377533 MYT1LQ9UL68 1186 aa25.06■■□□□ 1.6
SCRIB-203ENST00000377533 ITGAEP38570 1179 aa25.05■■□□□ 1.6
SCRIB-203ENST00000377533 NEFLP07196 543 aa25.04■■□□□ 1.6
SCRIB-203ENST00000377533 ERICH6Q7L0X2 663 aa24.97■■□□□ 1.59
SCRIB-203ENST00000377533 HRCP23327 699 aa24.96■■□□□ 1.59
SCRIB-203ENST00000377533 YTHDC1Q96MU7 727 aaKnown RBP24.87■■□□□ 1.57
SCRIB-203ENST00000377533 POLR3GLQ9BT43 218 aa24.68■■□□□ 1.54
SCRIB-203ENST00000377533 MYT1Q01538 1121 aa24.56■■□□□ 1.52
SCRIB-203ENST00000377533 FAM50AQ14320 339 aaKnown RBP24.56■■□□□ 1.52
SCRIB-203ENST00000377533 TRIM52Q96A61 297 aa24.4■■□□□ 1.5
SCRIB-203ENST00000377533 FBLN2P98095 1184 aa24.4■■□□□ 1.5
SCRIB-203ENST00000377533 CSRNP3Q8WYN3 585 aa24.33■■□□□ 1.49
SCRIB-203ENST00000377533 ZCCHC6Q5VYS8 1495 aaKnown RBP24.33■■□□□ 1.49
SCRIB-203ENST00000377533 SCRIBQ14160 1630 aa24.31■■□□□ 1.48
SCRIB-203ENST00000377533 CNGB1Q14028 1251 aaPredicted RBP24.31■■□□□ 1.48
SCRIB-203ENST00000377533 SLC4A1APQ9BWU0 796 aaKnown RBP24.29■■□□□ 1.48
SCRIB-203ENST00000377533 DIEXFQ68CQ4 756 aaKnown RBP24.19■■□□□ 1.46
SCRIB-203ENST00000377533 DAXXQ9UER7 740 aaPredicted RBP24.19■■□□□ 1.46
SCRIB-203ENST00000377533 NEUROD1Q13562 356 aa24.18■■□□□ 1.46
SCRIB-203ENST00000377533 CCDC180Q9P1Z9 1646 aa24.18■■□□□ 1.46
SCRIB-203ENST00000377533 P3H3Q8IVL6 736 aa24.1■■□□□ 1.45
SCRIB-203ENST00000377533 CDK11AQ9UQ88 783 aaPredicted RBP24.06■■□□□ 1.44
SCRIB-203ENST00000377533 ZNF326Q5BKZ1 582 aaKnown RBP24■■□□□ 1.43
SCRIB-203ENST00000377533 ARID3CA6NKF2 412 aa23.95■■□□□ 1.42
SCRIB-203ENST00000377533 ANP32CO43423 234 aa23.91■■□□□ 1.42
SCRIB-203ENST00000377533 ZNF777Q9ULD5 760 aaPredicted RBP23.87■■□□□ 1.41
SCRIB-203ENST00000377533 RB1CC1Q8TDY2 1594 aa23.84■■□□□ 1.41
SCRIB-203ENST00000377533 CLSPNQ9HAW4 1339 aa23.82■■□□□ 1.4
SCRIB-203ENST00000377533 DCAF1Q9Y4B6 1507 aa23.8■■□□□ 1.4
SCRIB-203ENST00000377533 ZNF316A6NFI3 1004 aaPredicted RBP23.79■■□□□ 1.4
SCRIB-203ENST00000377533 NPM1P06748 294 aaKnown RBP eCLIP23.72■■□□□ 1.39
SCRIB-203ENST00000377533 BCANQ96GW7 911 aa23.68■■□□□ 1.38
SCRIB-203ENST00000377533 ESF1Q9H501 851 aaKnown RBP23.64■■□□□ 1.38
SCRIB-203ENST00000377533 NACADO15069 1562 aa23.63■■□□□ 1.37
SCRIB-203ENST00000377533 NEFMP07197 916 aa23.61■■□□□ 1.37
SCRIB-203ENST00000377533 TONSLQ96HA7 1378 aa23.56■■□□□ 1.36
SCRIB-203ENST00000377533 ZBTB47Q9UFB7 747 aaPredicted RBP23.55■■□□□ 1.36
SCRIB-203ENST00000377533 CHMP7Q8WUX9 453 aaPredicted RBP23.54■■□□□ 1.36
SCRIB-203ENST00000377533 RSF1Q96T23 1441 aaPredicted RBP23.52■■□□□ 1.36
SCRIB-203ENST00000377533 RTL5Q5HYW3 569 aaPredicted RBP23.5■■□□□ 1.35
SCRIB-203ENST00000377533 GTF3C3Q9Y5Q9 886 aa23.49■■□□□ 1.35
SCRIB-203ENST00000377533 EEA1Q15075 1411 aa23.47■■□□□ 1.35
SCRIB-203ENST00000377533 MTUS2Q5JR59 1369 aa23.46■■□□□ 1.35
SCRIB-203ENST00000377533 STAG3Q9UJ98 1225 aa23.46■■□□□ 1.35
SCRIB-203ENST00000377533 TSPY4P0CV99 314 aa23.46■■□□□ 1.35
SCRIB-203ENST00000377533 TSPY10P0CW01 314 aa23.46■■□□□ 1.35
SCRIB-203ENST00000377533 CANXP27824 592 aaKnown RBP23.45■■□□□ 1.34
SCRIB-203ENST00000377533 CHGAP10645 457 aaKnown RBP23.44■■□□□ 1.34
SCRIB-203ENST00000377533 CLIP1P30622 1438 aa23.43■■□□□ 1.34
SCRIB-203ENST00000377533 BAZ1BQ9UIG0 1483 aaKnown RBP23.4■■□□□ 1.34
SCRIB-203ENST00000377533 CHIC2Q9UKJ5 165 aa23.39■■□□□ 1.34
SCRIB-203ENST00000377533 SLC24A1O60721 1099 aa23.39■■□□□ 1.33
SCRIB-203ENST00000377533 ACIN1Q9UKV3 1341 aaKnown RBP23.37■■□□□ 1.33
SCRIB-203ENST00000377533 WRNQ14191 1432 aaPredicted RBP eCLIP23.34■■□□□ 1.33
SCRIB-203ENST00000377533 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.31■■□□□ 1.322e-6■■■□□ 15.6
SCRIB-203ENST00000377533 GOLGA3Q08378 1498 aa23.3■■□□□ 1.32
SCRIB-203ENST00000377533 KIF27Q86VH2 1401 aa23.25■■□□□ 1.31
SCRIB-203ENST00000377533 PLEKHD1A6NEE1 506 aa23.23■■□□□ 1.31
SCRIB-203ENST00000377533 BAZ1AQ9NRL2 1556 aaPredicted RBP23.22■■□□□ 1.31
SCRIB-203ENST00000377533 DDX10Q13206 875 aaKnown RBP23.19■■□□□ 1.3
SCRIB-203ENST00000377533 CEP162Q5TB80 1403 aa23.17■■□□□ 1.3
SCRIB-203ENST00000377533 PLPPR3Q6T4P5 718 aa23.14■■□□□ 1.3
SCRIB-203ENST00000377533 CEP164Q9UPV0 1460 aa23.11■■□□□ 1.29
SCRIB-203ENST00000377533 BCL11AQ9H165 835 aa23.1■■□□□ 1.29
SCRIB-203ENST00000377533 KCNH8Q96L42 1107 aa23.1■■□□□ 1.29
SCRIB-203ENST00000377533 KDM2AQ9Y2K7 1162 aa23.1■■□□□ 1.29
SCRIB-203ENST00000377533 HNRNPUQ00839 825 aaKnown RBP eCLIP23.1■■□□□ 1.29
SCRIB-203ENST00000377533 TNIKQ9UKE5 1360 aa23.09■■□□□ 1.29
SCRIB-203ENST00000377533 RRP7BPQ9NSQ0 103 aa23.08■■□□□ 1.28
SCRIB-203ENST00000377533 TMC1Q8TDI8 760 aa23.07■■□□□ 1.28
SCRIB-203ENST00000377533 FAM9BQ8IZU0 186 aa23.06■■□□□ 1.28
SCRIB-203ENST00000377533 MYO15BQ96JP2 1530 aa23.02■■□□□ 1.28
SCRIB-203ENST00000377533 ERCC6Q03468 1493 aa23.02■■□□□ 1.28
SCRIB-203ENST00000377533 CFDP1Q9UEE9 299 aaPredicted RBP23.01■■□□□ 1.27
SCRIB-203ENST00000377533 CECR2Q9BXF3 1484 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms