RNA–Protein interactions for RNA: ENST00000340790.8

PALM3-201, Transcript of paralemmin 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PALM3, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3-201ENST00000340790 NISCHQ9Y2I1 1504 aa39.54■■■■□ 3.92
PALM3-201ENST00000340790 CCDC180Q9P1Z9 1646 aa33.87■■■■□ 3.01
PALM3-201ENST00000340790 ZCCHC6Q5VYS8 1495 aaKnown RBP33.41■■■□□ 2.94
PALM3-201ENST00000340790 SHROOM4Q9ULL8 1493 aa33.29■■■□□ 2.92
PALM3-201ENST00000340790 DCAF8L2P0C7V8 631 aa32.61■■■□□ 2.81
PALM3-201ENST00000340790 DCAF1Q9Y4B6 1507 aa32.57■■■□□ 2.81
PALM3-201ENST00000340790 SUPT5HO00267 1087 aaKnown RBP32.57■■■□□ 2.8
PALM3-201ENST00000340790 MYO15BQ96JP2 1530 aa31.75■■■□□ 2.67
PALM3-201ENST00000340790 CHIC1Q5VXU3 224 aa31.65■■■□□ 2.66
PALM3-201ENST00000340790 SCRIBQ14160 1630 aa31.5■■■□□ 2.63
PALM3-201ENST00000340790 ABCC9O60706 1549 aa31.49■■■□□ 2.63
PALM3-201ENST00000340790 NACADO15069 1562 aa31.33■■■□□ 2.61
PALM3-201ENST00000340790 RSF1Q96T23 1441 aaPredicted RBP31.14■■■□□ 2.58
PALM3-201ENST00000340790 RB1CC1Q8TDY2 1594 aa30.85■■■□□ 2.53
PALM3-201ENST00000340790 CECR2Q9BXF3 1484 aa30.74■■■□□ 2.51
PALM3-201ENST00000340790 MROH2BQ7Z745 1585 aa30.66■■■□□ 2.5
PALM3-201ENST00000340790 LOC105371045A0A1W2PR82 267 aa30.59■■■□□ 2.49
PALM3-201ENST00000340790 WIZO95785 1651 aa30.5■■■□□ 2.47
PALM3-201ENST00000340790 TRIM41Q8WV44 630 aa30.47■■■□□ 2.47
PALM3-201ENST00000340790 BAZ1AQ9NRL2 1556 aaPredicted RBP30.43■■■□□ 2.46
PALM3-201ENST00000340790 PCGF6Q9BYE7 350 aa30.36■■■□□ 2.45
PALM3-201ENST00000340790 UNC13AQ9UPW8 1703 aa30.35■■■□□ 2.45
PALM3-201ENST00000340790 HRCP23327 699 aa30.29■■■□□ 2.44
PALM3-201ENST00000340790 SMARCA4P51532 1647 aa30.17■■■□□ 2.42
PALM3-201ENST00000340790 TOP2AP11388 1531 aaKnown RBP30.1■■■□□ 2.41
PALM3-201ENST00000340790 FAM9AQ8IZU1 332 aaPredicted RBP30.06■■■□□ 2.4
PALM3-201ENST00000340790 EIF4G1Q04637 1599 aaKnown RBP30.04■■■□□ 2.4
PALM3-201ENST00000340790 TRIM26Q12899 539 aaPredicted RBP29.98■■■□□ 2.39
PALM3-201ENST00000340790 BICRAQ9NZM4 1560 aa29.93■■■□□ 2.38
PALM3-201ENST00000340790 CCDC88BA6NC98 1476 aa29.89■■■□□ 2.38
PALM3-201ENST00000340790 SMARCA2P51531 1590 aa29.89■■■□□ 2.38
PALM3-201ENST00000340790 PABPN1Q86U42 306 aaKnown RBP eCLIP29.82■■■□□ 2.36
PALM3-201ENST00000340790 EHMT2Q96KQ7 1210 aa29.7■■■□□ 2.34
PALM3-201ENST00000340790 PEG3Q9GZU2 1588 aa29.68■■■□□ 2.34
PALM3-201ENST00000340790 ABCC8Q09428 1581 aa29.68■■■□□ 2.34
PALM3-201ENST00000340790 PPARGC1BQ86YN6 1023 aaKnown RBP29.52■■■□□ 2.32
PALM3-201ENST00000340790 ATAD2BQ9ULI0 1458 aa29.42■■■□□ 2.3
PALM3-201ENST00000340790 EEA1Q15075 1411 aa29.36■■■□□ 2.29
PALM3-201ENST00000340790 SOGA1O94964 1423 aa29.34■■■□□ 2.29
PALM3-201ENST00000340790 BAZ1BQ9UIG0 1483 aaKnown RBP29.34■■■□□ 2.29
PALM3-201ENST00000340790 ZEB1P37275 1124 aaPredicted RBP29.31■■■□□ 2.28
PALM3-201ENST00000340790 WRNQ14191 1432 aaPredicted RBP eCLIP29.28■■■□□ 2.28
PALM3-201ENST00000340790 CSRNP3Q8WYN3 585 aa29.23■■■□□ 2.27
PALM3-201ENST00000340790 TNIKQ9UKE5 1360 aa29.19■■■□□ 2.26
PALM3-201ENST00000340790 RUSC2Q8N2Y8 1516 aa29.19■■■□□ 2.26
PALM3-201ENST00000340790 CEP162Q5TB80 1403 aa29.16■■■□□ 2.26
PALM3-201ENST00000340790 SYNJ1O43426 1573 aa29.13■■■□□ 2.25
PALM3-201ENST00000340790 GOLGA3Q08378 1498 aa29.07■■■□□ 2.24
PALM3-201ENST00000340790 UBTFP17480 764 aaKnown RBP29.04■■■□□ 2.24
PALM3-201ENST00000340790 HMGXB3Q12766 1538 aa28.95■■■□□ 2.23
PALM3-201ENST00000340790 CEP164Q9UPV0 1460 aa28.95■■■□□ 2.22
PALM3-201ENST00000340790 KIF21BO75037 1637 aa28.94■■■□□ 2.22
PALM3-201ENST00000340790 NCAPD3P42695 1498 aa28.94■■■□□ 2.22
PALM3-201ENST00000340790 TOP2BQ02880 1626 aa28.88■■■□□ 2.21
PALM3-201ENST00000340790 BIVM-ERCC5R4GMW8 1640 aa28.81■■■□□ 2.2
PALM3-201ENST00000340790 TTBK1Q5TCY1 1321 aaPredicted RBP28.71■■■□□ 2.19
PALM3-201ENST00000340790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.69■■■□□ 2.18
PALM3-201ENST00000340790 CLIP1P30622 1438 aa28.68■■■□□ 2.18
PALM3-201ENST00000340790 CCER1Q8TC90 406 aaPredicted RBP28.68■■■□□ 2.18
PALM3-201ENST00000340790 RAPGEF2Q9Y4G8 1499 aa28.67■■■□□ 2.18
PALM3-201ENST00000340790 CFTRP13569 1480 aa28.62■■■□□ 2.17
PALM3-201ENST00000340790 CUX1P39880 1505 aa28.58■■■□□ 2.17
PALM3-201ENST00000340790 VPS8Q8N3P4 1428 aa28.56■■■□□ 2.16
PALM3-201ENST00000340790 ERICH3Q5RHP9 1530 aa28.54■■■□□ 2.16
PALM3-201ENST00000340790 PRDM2Q13029 1718 aa28.51■■■□□ 2.15
PALM3-201ENST00000340790 PRXQ9BXM0 1461 aa28.5■■■□□ 2.15
PALM3-201ENST00000340790 KIF27Q86VH2 1401 aa28.44■■■□□ 2.14
PALM3-201ENST00000340790 APLP2Q06481 763 aa28.41■■■□□ 2.14
PALM3-201ENST00000340790 RANGAP1P46060 587 aaPredicted RBP28.36■■■□□ 2.13
PALM3-201ENST00000340790 CADPSQ9ULU8 1353 aa28.33■■■□□ 2.13
PALM3-201ENST00000340790 CC2D2AQ9P2K1 1620 aa28.28■■■□□ 2.12
PALM3-201ENST00000340790 ARAP1Q96P48 1450 aa28.24■■■□□ 2.11
PALM3-201ENST00000340790 HNRNPUL2Q1KMD3 747 aaKnown RBP28.19■■■□□ 2.1
PALM3-201ENST00000340790 CUX2O14529 1486 aa28.16■■■□□ 2.1
PALM3-201ENST00000340790 FGD5Q6ZNL6 1462 aa28.1■■■□□ 2.09
PALM3-201ENST00000340790 IGF1RP08069 1367 aa28.09■■■□□ 2.09
PALM3-201ENST00000340790 ARHGAP35Q9NRY4 1499 aa28.04■■■□□ 2.08
PALM3-201ENST00000340790 FANCD2Q9BXW9 1451 aa28.04■■■□□ 2.08
PALM3-201ENST00000340790 CARMIL1Q5VZK9 1371 aa27.98■■■□□ 2.07
PALM3-201ENST00000340790 DIEXFQ68CQ4 756 aaKnown RBP27.98■■■□□ 2.07
PALM3-201ENST00000340790 KANK4Q5T7N3 995 aaPredicted RBP27.97■■■□□ 2.07
PALM3-201ENST00000340790 DNMBPQ6XZF7 1577 aa27.93■■■□□ 2.06
PALM3-201ENST00000340790 ZNF316A6NFI3 1004 aaPredicted RBP27.89■■■□□ 2.05
PALM3-201ENST00000340790 RRBP1Q9P2E9 1410 aaKnown RBP27.87■■■□□ 2.05
PALM3-201ENST00000340790 TOPBP1Q92547 1522 aa27.85■■■□□ 2.05
PALM3-201ENST00000340790 ABCA10Q8WWZ4 1543 aa27.83■■■□□ 2.05
PALM3-201ENST00000340790 NESP48681 1621 aa27.82■■■□□ 2.04
PALM3-201ENST00000340790 POLA1P09884 1462 aaPredicted RBP27.8■■■□□ 2.04
PALM3-201ENST00000340790 MAP3K1Q13233 1512 aa27.79■■■□□ 2.04
PALM3-201ENST00000340790 RAD54L2Q9Y4B4 1467 aa27.79■■■□□ 2.04
PALM3-201ENST00000340790 LAMC3Q9Y6N6 1575 aa27.77■■■□□ 2.04
PALM3-201ENST00000340790 CLSPNQ9HAW4 1339 aa27.77■■■□□ 2.04
PALM3-201ENST00000340790 TIAM1Q13009 1591 aa27.75■■■□□ 2.03
PALM3-201ENST00000340790 CCNB3Q8WWL7 1395 aa27.74■■■□□ 2.03
PALM3-201ENST00000340790 CUL7Q14999 1698 aa27.71■■■□□ 2.03
PALM3-201ENST00000340790 FHAD1B1AJZ9 1412 aa27.7■■■□□ 2.03
PALM3-201ENST00000340790 DHX57Q6P158 1386 aaKnown RBP27.7■■■□□ 2.02
PALM3-201ENST00000340790 SCAF1Q9H7N4 1312 aaKnown RBP27.66■■■□□ 2.02
PALM3-201ENST00000340790 URB2Q14146 1524 aaKnown RBP27.63■■■□□ 2.01
PALM3-201ENST00000340790 LRRC9Q6ZRR7 1453 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms