RNA–Protein interactions for RNA: ENST00000401669.6

NRXN1-204, Transcript of neurexin 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NRXN1, Length 5,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-204ENST00000401669 DCAF8L2P0C7V8 631 aa27.92■■■□□ 2.06
NRXN1-204ENST00000401669 SUPT5HO00267 1087 aaKnown RBP26.04■■□□□ 1.76
NRXN1-204ENST00000401669 EHMT2Q96KQ7 1210 aa25.73■■□□□ 1.71
NRXN1-204ENST00000401669 PELP1Q8IZL8 1130 aaKnown RBP25.7■■□□□ 1.71
NRXN1-204ENST00000401669 APLP2Q06481 763 aa25.43■■□□□ 1.66
NRXN1-204ENST00000401669 FAM9AQ8IZU1 332 aaPredicted RBP25.33■■□□□ 1.65
NRXN1-204ENST00000401669 SHROOM4Q9ULL8 1493 aa25.29■■□□□ 1.64
NRXN1-204ENST00000401669 NISCHQ9Y2I1 1504 aa25.24■■□□□ 1.63
NRXN1-204ENST00000401669 TTBK1Q5TCY1 1321 aaPredicted RBP24.84■■□□□ 1.57
NRXN1-204ENST00000401669 ERICH6Q7L0X2 663 aa24.74■■□□□ 1.55
NRXN1-204ENST00000401669 RANGAP1P46060 587 aaPredicted RBP24.65■■□□□ 1.54
NRXN1-204ENST00000401669 ATP1B4Q9UN42 357 aaPredicted RBP24.61■■□□□ 1.53
NRXN1-204ENST00000401669 CCER1Q8TC90 406 aaPredicted RBP24.59■■□□□ 1.53
NRXN1-204ENST00000401669 PCGF6Q9BYE7 350 aa24.48■■□□□ 1.51
NRXN1-204ENST00000401669 CENPBP07199 599 aaPredicted RBP24.3■■□□□ 1.48
NRXN1-204ENST00000401669 NEFLP07196 543 aa24.13■■□□□ 1.45
NRXN1-204ENST00000401669 UBTFP17480 764 aaKnown RBP24.08■■□□□ 1.44
NRXN1-204ENST00000401669 TRIM41Q8WV44 630 aa24.05■■□□□ 1.44
NRXN1-204ENST00000401669 MYT1LQ9UL68 1186 aa24■■□□□ 1.43
NRXN1-204ENST00000401669 ZEB1P37275 1124 aaPredicted RBP23.99■■□□□ 1.43
NRXN1-204ENST00000401669 YTHDC1Q96MU7 727 aaKnown RBP23.84■■□□□ 1.41
NRXN1-204ENST00000401669 DAXXQ9UER7 740 aaPredicted RBP23.73■■□□□ 1.39
NRXN1-204ENST00000401669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.73■■□□□ 1.39
NRXN1-204ENST00000401669 HNRNPUL2Q1KMD3 747 aaKnown RBP23.73■■□□□ 1.39
NRXN1-204ENST00000401669 POLR3GLQ9BT43 218 aa23.71■■□□□ 1.39
NRXN1-204ENST00000401669 CHIC1Q5VXU3 224 aa23.57■■□□□ 1.36
NRXN1-204ENST00000401669 PPARGC1BQ86YN6 1023 aaKnown RBP23.5■■□□□ 1.35
NRXN1-204ENST00000401669 MYT1Q01538 1121 aa23.49■■□□□ 1.35
NRXN1-204ENST00000401669 ITGAEP38570 1179 aa23.49■■□□□ 1.35
NRXN1-204ENST00000401669 SLC4A1APQ9BWU0 796 aaKnown RBP23.47■■□□□ 1.35
NRXN1-204ENST00000401669 CNGB1Q14028 1251 aaPredicted RBP23.44■■□□□ 1.34
NRXN1-204ENST00000401669 CLSPNQ9HAW4 1339 aa23.17■■□□□ 1.3
NRXN1-204ENST00000401669 ZNF316A6NFI3 1004 aaPredicted RBP23.08■■□□□ 1.29
NRXN1-204ENST00000401669 TRIM26Q12899 539 aaPredicted RBP23■■□□□ 1.27
NRXN1-204ENST00000401669 RTL5Q5HYW3 569 aaPredicted RBP22.92■■□□□ 1.26
NRXN1-204ENST00000401669 ZBTB47Q9UFB7 747 aaPredicted RBP22.83■■□□□ 1.25
NRXN1-204ENST00000401669 TRIM52Q96A61 297 aa22.81■■□□□ 1.24
NRXN1-204ENST00000401669 SLC24A1O60721 1099 aa22.8■■□□□ 1.24
NRXN1-204ENST00000401669 HRCP23327 699 aa22.79■■□□□ 1.24
NRXN1-204ENST00000401669 FAM50AQ14320 339 aaKnown RBP22.77■■□□□ 1.23
NRXN1-204ENST00000401669 BCANQ96GW7 911 aa22.67■■□□□ 1.22
NRXN1-204ENST00000401669 BCL11AQ9H165 835 aa22.65■■□□□ 1.22
NRXN1-204ENST00000401669 ZNF326Q5BKZ1 582 aaKnown RBP22.63■■□□□ 1.21
NRXN1-204ENST00000401669 LOC105371045A0A1W2PR82 267 aa22.59■■□□□ 1.21
NRXN1-204ENST00000401669 NEUROD1Q13562 356 aa22.57■■□□□ 1.2
NRXN1-204ENST00000401669 FBLN2P98095 1184 aa22.55■■□□□ 1.2
NRXN1-204ENST00000401669 NEFMP07197 916 aa22.54■■□□□ 1.2
NRXN1-204ENST00000401669 CANXP27824 592 aaKnown RBP22.51■■□□□ 1.19
NRXN1-204ENST00000401669 DIEXFQ68CQ4 756 aaKnown RBP22.42■■□□□ 1.18
NRXN1-204ENST00000401669 ANP32CO43423 234 aa22.36■■□□□ 1.17
NRXN1-204ENST00000401669 ESF1Q9H501 851 aaKnown RBP22.31■■□□□ 1.16
NRXN1-204ENST00000401669 CDK11AQ9UQ88 783 aaPredicted RBP22.28■■□□□ 1.16
NRXN1-204ENST00000401669 PABPN1Q86U42 306 aaKnown RBP eCLIP22.26■■□□□ 1.15
NRXN1-204ENST00000401669 PLPPR3Q6T4P5 718 aa22.2■■□□□ 1.14
NRXN1-204ENST00000401669 ARID3CA6NKF2 412 aa22.19■■□□□ 1.14
NRXN1-204ENST00000401669 STAG3Q9UJ98 1225 aa22.14■■□□□ 1.13
NRXN1-204ENST00000401669 ZNF777Q9ULD5 760 aaPredicted RBP22.12■■□□□ 1.13
NRXN1-204ENST00000401669 CHGAP10645 457 aaKnown RBP22.07■■□□□ 1.12
NRXN1-204ENST00000401669 P3H3Q8IVL6 736 aa22.04■■□□□ 1.12
NRXN1-204ENST00000401669 HSP90AA1P07900 732 aaKnown RBP22■■□□□ 1.11
NRXN1-204ENST00000401669 ANP32AP39687 249 aaKnown RBP21.98■■□□□ 1.11
NRXN1-204ENST00000401669 ANP32BQ92688 251 aaKnown RBP21.98■■□□□ 1.11
NRXN1-204ENST00000401669 NPM2Q86SE8 214 aaKnown RBP21.96■■□□□ 1.11
NRXN1-204ENST00000401669 NPM1P06748 294 aaKnown RBP eCLIP21.92■■□□□ 1.1
NRXN1-204ENST00000401669 GTF3C3Q9Y5Q9 886 aa21.9■■□□□ 1.1
NRXN1-204ENST00000401669 ABCC9O60706 1549 aa21.88■■□□□ 1.09
NRXN1-204ENST00000401669 A0A0G2JS52 829 aa21.87■■□□□ 1.09
NRXN1-204ENST00000401669 SCAF1Q9H7N4 1312 aaKnown RBP21.87■■□□□ 1.09
NRXN1-204ENST00000401669 UPF2Q9HAU5 1272 aaKnown RBP21.83■■□□□ 1.09
NRXN1-204ENST00000401669 CDK11BP21127 795 aaKnown RBP21.75■■□□□ 1.07
NRXN1-204ENST00000401669 SALL2Q9Y467 1007 aaPredicted RBP21.68■■□□□ 1.06
NRXN1-204ENST00000401669 EIF5BO60841 1220 aaKnown RBP21.68■■□□□ 1.06
NRXN1-204ENST00000401669 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.66■■□□□ 1.06
NRXN1-204ENST00000401669 ZBTB7CA1YPR0 619 aa21.63■■□□□ 1.05
NRXN1-204ENST00000401669 PLEKHG5O94827 1062 aa21.62■■□□□ 1.05
NRXN1-204ENST00000401669 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.62■■□□□ 1.05
NRXN1-204ENST00000401669 TONSLQ96HA7 1378 aa21.62■■□□□ 1.05
NRXN1-204ENST00000401669 FAM9BQ8IZU0 186 aa21.6■■□□□ 1.05
NRXN1-204ENST00000401669 C14orf37Q86TY3 774 aa21.56■■□□□ 1.04
NRXN1-204ENST00000401669 HNRNPUQ00839 825 aaKnown RBP eCLIP21.56■■□□□ 1.04
NRXN1-204ENST00000401669 WDR43Q15061 677 aaKnown RBP eCLIP21.55■■□□□ 1.04
NRXN1-204ENST00000401669 CSRNP3Q8WYN3 585 aa21.55■■□□□ 1.04
NRXN1-204ENST00000401669 FKBP8Q14318 412 aa21.52■■□□□ 1.04
NRXN1-204ENST00000401669 MYH16Q9H6N6 1097 aa21.52■■□□□ 1.04
NRXN1-204ENST00000401669 TMC1Q8TDI8 760 aa21.52■■□□□ 1.03
NRXN1-204ENST00000401669 ARXQ96QS3 562 aa21.49■■□□□ 1.03
NRXN1-204ENST00000401669 HAP1P54257 671 aaPredicted RBP21.47■■□□□ 1.03
NRXN1-204ENST00000401669 CHIC2Q9UKJ5 165 aa21.46■■□□□ 1.03
NRXN1-204ENST00000401669 KDM2AQ9Y2K7 1162 aa21.45■■□□□ 1.02
NRXN1-204ENST00000401669 PPP1R15AO75807 674 aaPredicted RBP21.44■■□□□ 1.02
NRXN1-204ENST00000401669 SENP3Q9H4L4 574 aaPredicted RBP21.44■■□□□ 1.02
NRXN1-204ENST00000401669 TSPY4P0CV99 314 aa21.43■■□□□ 1.02
NRXN1-204ENST00000401669 TSPY10P0CW01 314 aa21.43■■□□□ 1.02
NRXN1-204ENST00000401669 CCDC136Q96JN2 1154 aa21.43■■□□□ 1.02
NRXN1-204ENST00000401669 DDX10Q13206 875 aaKnown RBP21.41■■□□□ 1.02
NRXN1-204ENST00000401669 ACIN1Q9UKV3 1341 aaKnown RBP21.36■■□□□ 1.01
NRXN1-204ENST00000401669 GLIPR1L2Q4G1C9 344 aa21.36■■□□□ 1.01
NRXN1-204ENST00000401669 TULP1O00294 542 aaPredicted RBP21.34■■□□□ 1.01
NRXN1-204ENST00000401669 NCLP19338 710 aaKnown RBP21.31■■□□□ 1
NRXN1-204ENST00000401669 MRS2Q9HD23 443 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms